Cdis001280.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- ZFX
- Assembly
- GCA_963576895.1
- Location
- OY756358.1:24390219-24392291[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 5e-05 0.0022 18.7 2.9 1 23 10 33 10 33 0.97 2 15 3.6e-05 0.0016 19.1 1.1 1 23 38 60 38 60 0.98 3 15 0.0002 0.0091 16.8 1.4 1 23 66 88 66 88 0.98 4 15 0.0037 0.17 12.8 8.5 1 23 94 117 94 117 0.93 5 15 0.36 16 6.5 1.6 1 23 123 145 123 145 0.89 6 15 0.00013 0.006 17.4 2.8 1 23 151 174 151 174 0.95 7 15 4.2e-06 0.00019 22.1 1.8 1 23 378 401 378 401 0.96 8 15 0.6 27 5.9 0.6 2 12 403 413 402 420 0.83 9 15 0.0015 0.067 14.1 5.7 1 23 424 446 424 446 0.98 10 15 0.018 0.8 10.7 1.0 2 23 465 487 464 487 0.92 11 15 0.00066 0.03 15.2 0.3 1 23 492 514 492 514 0.98 12 15 0.018 0.82 10.6 1.7 1 20 520 539 520 542 0.93 13 15 0.0004 0.018 15.9 4.2 1 23 548 571 548 571 0.98 14 15 1.2e-06 5.6e-05 23.8 3.3 1 23 577 599 577 599 0.98 15 15 4.7e-05 0.0021 18.8 2.0 1 23 605 628 605 628 0.93
Sequence Information
- Coding Sequence
- ATGGATGAAATAAAAGCCAGTGATTTGTTTATATGTCACGTTTGTGGAGCGAAATTTAACAACAAGGCCCATGTCAATCAACACATCAGAAAGAGTCATCCATCGCAGTTATTTCAATGCGACTTGTGCCCCAAAACATTCAACGTTAGATGGAAATTGAAGCGACATAAATTAATTCACAGTGGACAAGAACCCTTCCAATGTCAGTATTGCCCCAAGAAGTACGTGACGTTCTCTGAATGGAGACTCCACGTCAAGAGTCACACAGACAACAAACTCCATATGTGTCACATTTGCTCGAAACAATTCAAATATAAACATCATTTGAGTAAACACGTCAATGCGGTCCATTTGGATATAAGGAATTATATGTGTGGTGTTTGTGGCGCCGCCTTTCATTCAAAAAACAAACTACAATGTCATTCGATCATTCACTCGGGCGAAAAACCATTCAAATGTCAGTTCTGTAGCAAACAATGCACCCAAGCCAGTAACCTTAAAACGCATATTTTAGGAGTTCACAAAGATTTGAGTCATTTGGTTTATAATAAAGATACGACTCAAGAGTCACTGGGAGTCGATCCGAAATCAATCGTAGTTCCAACGTCTTATAAAGATTATATTAAAACTATCAAAGGCGAAGAGACGAATGAAAAGTCAAACGAAATTATAAACAAGCGTTTAAAAAGAAGGCTGTATGACGATGATGCCGAATGTTTACAAGAAACTGGTGAAGTCGTGTCGTCTATCATCGTACGCAACAATCgtaaaaagaatattattaaacacaatagaaaaacaaaaactaaaataaaaaatggaaaaacaatggacaataatgaaattaaagTAGATATTCCAAAGTTAAAGATTGAAATTCCTGAAGAAAATGTTAAACTTGAGCCACTTTCTCCGAAACATGAATCCACTAGTGATGTGAATTGcgaaataaagtgtgaattaaCGTGTCTCGACAAAAACATTACAGAGAATGGTTGCGATGAATTGGAATGTTTTAAAATTGAACATAAAACTAATGGCATTATTAAAAGTGACCTTGATACCACGAATGAACGAGATGTAAACTCGACTGAAAGACAAGAGACAATTCCCACTGACTCACAAAAACTTTATTCTTGTAAAATGTGCGATAAACGTTTTACCTCAACTAGTGGTTTATCTCGACATATGATAAATTTCCATAAGATGTGTACGAAGTGCGATAAAGTCTTTGAAAGCGACAAGGATTCAAGGCAACATTGCGATAAGTACTGTTGTAAATATTGTACGCAAGTTTTTGATACGAGAAAGGAATTtgcaaaacataaaaatacacatcGAGCTAAACGAAAATGTAAAACAAAGTCTTCGGTGATTTCAGATACATCATGTTATTGTGATGCCTGCGGTATGAAAATAAGTAATCGTCGTAATCTGATAAAACACATATCACTCATGCACAGCAGTACGACATACAAATGCGATCAGTGCCCCAAGACGTATCCAGTGGaatggaagttaaataatcACAAATTAATACACAGCGGCACAGAGCCCTTTAAGTGTATCCTGTGTCCGAAGAAATTCGTTTCGTACGGATCTCTAAAAATACACATGATTTGCCACAATAATACGAAAAACTATAAATGCGAAACGTGCTCGAAGCTGTTTAAACTTAAGAATCATTTACGCAAACACGTGAATACAGTACATTTGAACATTAGGAAATACGTTTGCGATATTTGTGGCGCGACATTCAGCAGCAATCATCATTTGAAACGTCACACGATGTCGCACACTGGGGACAAGCCTTTCAAGTGTAAATTCTGTGACAAGCAATGCACACAGGCGAGCAATCTAAAGATTCACGTACTCGGAGTACACAGAGATGTCAGCCATTTAGTTTATAAGAAAGAAGAGCTAAAGACTTCATCACAAATAGATGCGAATTCCACGGTTATTCCTAAATTCTCTAAAGATTATCTCAAGATTATAACAGCCGGCGACACAAATTATGCAAGTAgttgtatctcaacagatacacaggaGGATGgacatcaggcttatgactga
- Protein Sequence
- MDEIKASDLFICHVCGAKFNNKAHVNQHIRKSHPSQLFQCDLCPKTFNVRWKLKRHKLIHSGQEPFQCQYCPKKYVTFSEWRLHVKSHTDNKLHMCHICSKQFKYKHHLSKHVNAVHLDIRNYMCGVCGAAFHSKNKLQCHSIIHSGEKPFKCQFCSKQCTQASNLKTHILGVHKDLSHLVYNKDTTQESLGVDPKSIVVPTSYKDYIKTIKGEETNEKSNEIINKRLKRRLYDDDAECLQETGEVVSSIIVRNNRKKNIIKHNRKTKTKIKNGKTMDNNEIKVDIPKLKIEIPEENVKLEPLSPKHESTSDVNCEIKCELTCLDKNITENGCDELECFKIEHKTNGIIKSDLDTTNERDVNSTERQETIPTDSQKLYSCKMCDKRFTSTSGLSRHMINFHKMCTKCDKVFESDKDSRQHCDKYCCKYCTQVFDTRKEFAKHKNTHRAKRKCKTKSSVISDTSCYCDACGMKISNRRNLIKHISLMHSSTTYKCDQCPKTYPVEWKLNNHKLIHSGTEPFKCILCPKKFVSYGSLKIHMICHNNTKNYKCETCSKLFKLKNHLRKHVNTVHLNIRKYVCDICGATFSSNHHLKRHTMSHTGDKPFKCKFCDKQCTQASNLKIHVLGVHRDVSHLVYKKEELKTSSQIDANSTVIPKFSKDYLKIITAGDTNYASSCISTDTQEDGHQAYD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -