Basic Information

Insect: Ceraclea dissimilis
Gene Symbol: -
Assembly: GCA_963576895.1
Location: OY756371.1:16701139-16702863[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00035 0.016 16.1 0.3 1 23 128 150 128 150 0.95

2 15 7.5e-07 3.4e-05 24.4 1.0 1 23 156 178 156 178 0.96

3 15 0.014 0.62 11.0 0.8 1 23 184 206 184 206 0.97

4 15 8.3e-08 3.7e-06 27.5 3.1 1 23 212 234 212 234 0.98

5 15 0.031 1.4 9.9 1.3 1 23 240 262 240 262 0.97

6 15 2.2e-05 0.001 19.8 1.7 1 23 281 303 281 303 0.98

7 15 2.8e-06 0.00013 22.6 0.5 1 23 309 331 309 331 0.98

8 15 8.8e-06 0.0004 21.1 0.8 1 23 337 359 337 359 0.98

9 15 2.3e-05 0.001 19.8 3.0 1 23 365 387 365 387 0.98

10 15 6.6e-05 0.003 18.3 5.5 1 23 393 415 393 415 0.98

11 15 0.21 9.4 7.3 0.3 1 19 420 438 420 442 0.95

12 15 0.0044 0.2 12.6 0.5 1 23 451 473 451 473 0.94

13 15 1.9e-05 0.00084 20.0 3.5 1 23 478 500 478 500 0.97

14 15 0.00039 0.018 15.9 0.9 1 23 506 528 506 528 0.98

15 15 2.9e-06 0.00013 22.6 1.3 1 23 534 557 534 557 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00035	0.016	16.1	0.3	1	23	128	150	128	150	0.95
2	15	7.5e-07	3.4e-05	24.4	1.0	1	23	156	178	156	178	0.96
3	15	0.014	0.62	11.0	0.8	1	23	184	206	184	206	0.97
4	15	8.3e-08	3.7e-06	27.5	3.1	1	23	212	234	212	234	0.98
5	15	0.031	1.4	9.9	1.3	1	23	240	262	240	262	0.97
6	15	2.2e-05	0.001	19.8	1.7	1	23	281	303	281	303	0.98
7	15	2.8e-06	0.00013	22.6	0.5	1	23	309	331	309	331	0.98
8	15	8.8e-06	0.0004	21.1	0.8	1	23	337	359	337	359	0.98
9	15	2.3e-05	0.001	19.8	3.0	1	23	365	387	365	387	0.98
10	15	6.6e-05	0.003	18.3	5.5	1	23	393	415	393	415	0.98
11	15	0.21	9.4	7.3	0.3	1	19	420	438	420	442	0.95
12	15	0.0044	0.2	12.6	0.5	1	23	451	473	451	473	0.94
13	15	1.9e-05	0.00084	20.0	3.5	1	23	478	500	478	500	0.97
14	15	0.00039	0.018	15.9	0.9	1	23	506	528	506	528	0.98
15	15	2.9e-06	0.00013	22.6	1.3	1	23	534	557	534	557	0.98

Sequence Information

Coding Sequence: ATGAACTCTGTCGGAGATAGTAATATATTTACATCTCATAGTGTTGAAGATATTATTAAAGCTGAAATGGAACACGGTGACCAAGACGAGAACCTCGGGGAAGAAGATCAGTCCGTGAAACAAGAGTTATCAGATGAAGAAAACGATTTAGCGGAAGATATGCAACAAATTCCGGTTGAATTTGATTTTACCAATGATCATATAGAAGCAAAAAATGAAGACAAACATAATACAGAAGAATATGAAACGTATTTCGAAGAAGAATTAGAAGATGACACTAATAACTATTACATTCCCGCAGCGGATGACAATGTTGCCACTACATCGACATCAAAATCGAcaaaaaagtcaaaatctcGACCTAAACATCCACCAAAAGAATTCCCTTGCGACGAATGCAATAAGAGTTTTGCCAACGTAACGAAATTAGACAGACACAAGATAGGACACAGCGCTCCTAGACCTTTTGCATGtaacatttgcaagaagacTTTCATACAATCAAGCGATTTGAGaagacataaactaattcacacagGAGAAAAGTCTTTCGAATGTGATATTTGCATGCGGAAATTTAATAGATTATACGTTTTGAATTCGCACAAGTTGATTCACGAGAGAGAATCTGTTTACAAATGCGACGAATGCAATAAAACGTTTACGAGATCGGATAAtctgaaaaaacataaattgtctCACAGTGGCGATATGCCGTATCAGTGCCGTGTTTGTAATAACAAGTTTCTGAGATTAGATACGTTACGAAAACACGAATCCATACATAAATGCGACGAAGAATATTCAATGCCTAAAGTGGACGACAGTGGGGTAATGTTTTATCAGTGTGACGTTTGCGAAAAGAAATTTGATAATTTGACGTACTTGAAAAAACATAAGGCGACACACACAGAAGAACGTCCGTATGTTTGTGACATATGTAATAAAGATTTCGCTCACGTCGCCAATTTAAAAAAGCATCTAATGATTCACACGGGAATTAAGCCGTACCAGTGTGAAATTTGTGAAGTTAGATTTACGCAATCGAGTGCGTTACGAACGCACAAATTACGACACAGCGATGAAAAGAAATACGAGTGCACGACATGTCACGTCAGATTTACGCAACCGAGCAGTTTGAGAACTCACAGGCTGAGTCACACAGGCGAACGACGGTTCGAATGCGACATTTGTTTGAAACGATTCTCTCGATCGACGCATTTGAAGAAACACAAATTTACGcacttgaaaaaaaattacgaatgcGATGCGTGTCACGTAAAGTTTAGGAATATGAACGCGTTAGAAGTGCACGACGCCTATCACAAAGATGACGACGATTCTGTCGAACACGATTGTAATCTTTGCGGTAAGAAATTTTATTCAGAGGAGATTTTAAATGTTCACATTATAAATCACAGTACGCTGACTTACGAGTGTAAGATTTGTAAGCGGAGTTTTTATGAGAAATATCATCTTCAGAGGCACGAATTGGTGCATACGGGTCAAAAAACTTACGAATGCGACGTCTGTTTCAAGAGATTCCTACACAAGGTATCGTTGGAGGCGCACATGTTGATTCACACCGACGCTTATTCCTTCCAGTGCGAACTCTGCGACCAAAAGTTTAAACAAGTTGCTAATTTAAAGAAACATATTAAATCGACTCATCCTAAAGTTGAGTTTGAAGAAGTTTTGGAATGTGAATTTGAACCTAACTCGTGA
Protein Sequence: MNSVGDSNIFTSHSVEDIIKAEMEHGDQDENLGEEDQSVKQELSDEENDLAEDMQQIPVEFDFTNDHIEAKNEDKHNTEEYETYFEEELEDDTNNYYIPAADDNVATTSTSKSTKKSKSRPKHPPKEFPCDECNKSFANVTKLDRHKIGHSAPRPFACNICKKTFIQSSDLRRHKLIHTGEKSFECDICMRKFNRLYVLNSHKLIHERESVYKCDECNKTFTRSDNLKKHKLSHSGDMPYQCRVCNNKFLRLDTLRKHESIHKCDEEYSMPKVDDSGVMFYQCDVCEKKFDNLTYLKKHKATHTEERPYVCDICNKDFAHVANLKKHLMIHTGIKPYQCEICEVRFTQSSALRTHKLRHSDEKKYECTTCHVRFTQPSSLRTHRLSHTGERRFECDICLKRFSRSTHLKKHKFTHLKKNYECDACHVKFRNMNALEVHDAYHKDDDDSVEHDCNLCGKKFYSEEILNVHIINHSTLTYECKICKRSFYEKYHLQRHELVHTGQKTYECDVCFKRFLHKVSLEAHMLIHTDAYSFQCELCDQKFKQVANLKKHIKSTHPKVEFEEVLECEFEPNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -