Cdis000727.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- Zbtb41
- Assembly
- GCA_963576895.1
- Location
- OY756358.1:14182220-14185542[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0046 0.21 12.5 1.9 1 23 80 102 80 102 0.99 2 19 0.0018 0.083 13.8 3.0 1 23 108 130 108 130 0.97 3 19 0.014 0.61 11.0 1.2 1 23 136 158 136 158 0.95 4 19 0.00021 0.0096 16.7 0.8 1 23 190 212 190 212 0.94 5 19 0.019 0.86 10.6 0.4 1 23 249 271 249 271 0.98 6 19 0.0025 0.11 13.4 1.0 1 23 277 299 277 299 0.97 7 19 0.003 0.13 13.1 2.9 1 23 398 420 398 420 0.98 8 19 0.00016 0.0071 17.1 0.2 1 23 426 449 426 449 0.97 9 19 1.6e-06 7.1e-05 23.4 2.0 1 23 455 477 455 477 0.98 10 19 0.00032 0.015 16.2 2.2 3 23 659 679 657 679 0.97 11 19 0.00032 0.015 16.2 1.9 1 23 685 707 685 707 0.98 12 19 3.1e-05 0.0014 19.3 3.5 1 23 713 735 713 735 0.97 13 19 0.00013 0.006 17.4 1.3 1 23 744 766 744 766 0.97 14 19 6.5e-05 0.0029 18.4 3.7 1 23 775 797 775 797 0.99 15 19 0.21 9.3 7.3 0.5 2 23 804 825 803 825 0.94 16 19 0.0076 0.34 11.8 1.9 2 21 832 851 831 853 0.93 17 19 1.2e-07 5.2e-06 27.0 3.8 1 23 859 881 859 881 0.98 18 19 0.0067 0.3 12.0 1.2 3 23 889 909 887 909 0.94 19 19 4e-05 0.0018 19.0 1.3 1 22 915 936 915 936 0.96
Sequence Information
- Coding Sequence
- ATGGAAGAATTAATTGATAGTCTCTCCTGTGCGAGCCATGTAAAAGTGAAGAATGAATTATCTTCTACTGGTTATAATGAACAGCATCCTACTGTTAGAGGAGATGGTTATTTCAAACATCACGAAGATGTAGAGGGCTATGTTAAAGTGGAAAATGAACTGTCAAATGAAGATATGATTTCATCTCTCCAATGCAGTACTAAATTGACTTCTGGTAAAAAGTCCAGTAAGAAAGTTTATAAATGTGAAGATTGTGGATTTATGAGTAAGAAAATACGTCAGATGCAAAGACACTTCCGTGTCCACGAGCCAGACAAGCCCCACCAGTGTGACATCTGTAAGAAATCATTTAATAAGTTGGGCGTCATGAAGAGACATAGACTCTCTCACACGGCGCAGAAACATTACTTGTGTGATCTCTGTGGGCGCTCCTACACTCAAATCATGAGCTTCAAATATCATAAACTCAGCCACATGAAATTTTTAGATGATAAAAAGAATGACGACGAGTTAGCAACATCAGAAATAAAAGAGAATTTGAATGATAATGAATTGCCTAAAAATAAATTCCTGTGTGATCTCTGTGGAaagtttttcaaacaagcaatCACATTGAAAGTTCATAAAAAGTGgcatgaaaataaaaaagattgtaTGCCAAATATGAATAAGAAAGATGGcacagaaaaaagaaaattagCAAAAGCCAGAGTAATGAATGGAGCGACTAGTAGAAGAAAATCATTTAAATGCAGTGAATGTCCCTTCATGGCCACCAGGTCCCGTGACGTACTCTCCCACATGTACGTACACACGGGGAAGAAACCATTCAGTTGTCAGATTTGTAGACGATGGTTCTCTAAACCAAATACATTAAAGAGGCATATTTTGTTACACAATAATCAAATGTCTAGAGTTAATAATTACACTCCAAATAAAGATGTAAGGAATTGTACAGGAGACGGCTATCATCAGTTGCCACAAATTGTAACAATACAACCAAATGAATCTCAAGTTGATGAAAGCAACTCCTCACTTATAAGTAACAATCTTGTAACAAATGTAGCacctacaatattaaaaattcaattgcCTAAACCGAATGATGTTTGCAATACTAAATTAAATAGCAAAATGCCTAAAGTTGAAGTAGTGAAGAATATTAAAGTGAAGAGTGTCGGTAGGAAGCGATATTATTGTGACGAGTGCCCTTATTCATCACACTCCTCTAGGGACTTGAAAGTTCACAAACGCAGACACACTGGGGAAAAGCCTTATGCTTGTACAGTGTGTGACAAAACGTTTGCTAACCGCAGTGTTGCCAAACGTCATGTCTTAACAGTTCATTCGGAAGAGCGGGCTCATAAATGTAATATATGTGGAAAGGGTTATACGCAGGCGAGTAACTTAAAGATGCATAAACTGACACATTACGACATCGCAACTGGGGAACTCCACAACCAAAACAAACAACCAACTGTGGGACGACCTAAAGGGGAaattatatttaacaacatGGAGGAGGCTACTAGCTGTTTAGAAGCTATTGTttcacaaacaataaataacaaatacatcCACAATACAAGTACATCCAAATATACAAAGTCATCTAAGAGGAAAAAGGAGAAGAAAGAAGACAAGTGTGTTATTTCACAGCAAACTGAGATGCCTTCAAAGAATGAAATTTCAAGTCAAGATTGTGGTTTAGTTGATGATGAAGTGAAAAATGTAATTGAATCATTTGATGACAATAGTCATTTTGAAGATTTCACAATGAATAATGATGATCATTCACATGATGAAGTCGAGAATACAAATGGTTTTGATATAAAGGATGAATCCAACAGTGACTCAGACAAACTTACAAAGCTAATTGAAACTTGTGATAACTTAAAAGTAGAAATATCAGATGATTTGATAAATTATGAGAATCCAGAAATAAAAGTAGAGCCAATATATGATAttgataatTGTAATCTGTGTCATTATACTGTGGCAAAGAAACGTGACTTGGAAAGACACATGAGATCTCACAGTAAGGAGAAACCTTATGAATGTGACATATGTAAGAGGCACTTCTCCGACCAGAGTGTAGTCAAACGTCACAAGCTCATCCATCTTGGAATCAAAAGATTTTCATGTCAGTTTTGTGACAAGAAGTTTTCACAATCGACCGGACTAAAAGCTCACATGCTCCACCACACAGGAGCCCCTCCCATTCTTCCGTATATCTGCGACTTGTGCGGCAACACATTTTCCCAGGAGAAAAGTCTCAAAGCTCACCGTCATGTACACTTTCGCGGCAATAGTTCCACGCAGTACACTTGTAGCGATTGTGGAAAATCTTTTTCTTTCGAATGCCGTTTGAAAGAACACCAATTGACACACAACGGGGAAAGGACTGTTCCGTGTGATTTGTGCGATAAGAAATTCTTACGTGTGAAGGACATGCGTTCCCACCGCTTATTACACACTAGGAAACAAAAGAGTGTATGTGACAAGTGTGGCAAATTGTTCGCAACACCAAAAACATTACGTTTACATACACAATGTCACTCACTAGAGAAACCATACGTGTGTCACATCTGTGGGACAGCATTCTCACGTCAGAGTCATTTGACGAGACATACCTTAACTCACACTGGAGTCAAGACCTTTGGTTGTTCAGTTTGTAATAAATGGTTTACTCAGCGCAGTGCATTGAATCGTCATAAATTCTTACATACAAATGATACGCCATATTCTTGTAGTGTTTGTTCTAAACGGTTTAAAATGTTGGATAATTTGAAGAAACATATCAAAAGAACTAAACAATGCACTGGGAGTTTATTAAATAAGAATGTGACGGATTCATTTACCAATCATGAGGGACAATTACATAATAACAGTTCTATACAAATTCAATCTCTCCCTCAACCAGAGATAAAAGTACTCGCACCATTCAATGGCTGA
- Protein Sequence
- MEELIDSLSCASHVKVKNELSSTGYNEQHPTVRGDGYFKHHEDVEGYVKVENELSNEDMISSLQCSTKLTSGKKSSKKVYKCEDCGFMSKKIRQMQRHFRVHEPDKPHQCDICKKSFNKLGVMKRHRLSHTAQKHYLCDLCGRSYTQIMSFKYHKLSHMKFLDDKKNDDELATSEIKENLNDNELPKNKFLCDLCGKFFKQAITLKVHKKWHENKKDCMPNMNKKDGTEKRKLAKARVMNGATSRRKSFKCSECPFMATRSRDVLSHMYVHTGKKPFSCQICRRWFSKPNTLKRHILLHNNQMSRVNNYTPNKDVRNCTGDGYHQLPQIVTIQPNESQVDESNSSLISNNLVTNVAPTILKIQLPKPNDVCNTKLNSKMPKVEVVKNIKVKSVGRKRYYCDECPYSSHSSRDLKVHKRRHTGEKPYACTVCDKTFANRSVAKRHVLTVHSEERAHKCNICGKGYTQASNLKMHKLTHYDIATGELHNQNKQPTVGRPKGEIIFNNMEEATSCLEAIVSQTINNKYIHNTSTSKYTKSSKRKKEKKEDKCVISQQTEMPSKNEISSQDCGLVDDEVKNVIESFDDNSHFEDFTMNNDDHSHDEVENTNGFDIKDESNSDSDKLTKLIETCDNLKVEISDDLINYENPEIKVEPIYDIDNCNLCHYTVAKKRDLERHMRSHSKEKPYECDICKRHFSDQSVVKRHKLIHLGIKRFSCQFCDKKFSQSTGLKAHMLHHTGAPPILPYICDLCGNTFSQEKSLKAHRHVHFRGNSSTQYTCSDCGKSFSFECRLKEHQLTHNGERTVPCDLCDKKFLRVKDMRSHRLLHTRKQKSVCDKCGKLFATPKTLRLHTQCHSLEKPYVCHICGTAFSRQSHLTRHTLTHTGVKTFGCSVCNKWFTQRSALNRHKFLHTNDTPYSCSVCSKRFKMLDNLKKHIKRTKQCTGSLLNKNVTDSFTNHEGQLHNNSSIQIQSLPQPEIKVLAPFNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -