Cdis014362.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- ZNF219
- Assembly
- GCA_963576895.1
- Location
- OY756372.1:6003472-6005814[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.01 0.45 11.5 0.8 2 21 153 172 152 174 0.95 2 20 0.0052 0.23 12.4 1.6 1 23 180 203 180 203 0.97 3 20 0.002 0.091 13.7 1.3 1 23 215 237 215 237 0.97 4 20 1.1e-06 4.8e-05 24.0 1.0 1 23 243 265 243 265 0.97 5 20 3.2e-06 0.00015 22.5 2.5 1 23 271 293 271 293 0.98 6 20 1.6e-05 0.00072 20.3 1.2 1 23 299 321 299 321 0.97 7 20 9.5e-08 4.3e-06 27.3 0.4 2 23 331 353 330 353 0.96 8 20 0.2 9.1 7.4 1.5 2 23 359 377 358 377 0.79 9 20 0.2 9.2 7.3 0.2 2 21 398 417 397 418 0.91 10 20 0.065 2.9 8.9 6.0 1 23 425 447 425 447 0.97 11 20 1.1e-05 0.00048 20.8 1.6 1 23 453 475 453 475 0.98 12 20 3.5e-05 0.0016 19.2 0.7 1 23 481 503 481 503 0.97 13 20 3.9e-05 0.0018 19.0 0.2 2 23 510 532 509 532 0.96 14 20 4.7e-06 0.00021 21.9 1.6 1 23 586 608 586 608 0.98 15 20 2.2e-06 9.7e-05 23.0 0.7 3 23 616 636 614 636 0.98 16 20 3.2e-06 0.00014 22.5 1.5 1 23 642 664 642 664 0.98 17 20 1.3e-06 5.8e-05 23.7 0.7 1 23 670 692 670 692 0.99 18 20 5.8e-06 0.00026 21.7 0.3 2 23 699 721 698 721 0.96 19 20 0.16 7.1 7.7 0.3 3 12 728 737 727 742 0.90 20 20 5.2e-05 0.0023 18.7 3.7 1 23 751 773 751 773 0.97
Sequence Information
- Coding Sequence
- ATGGACAGTGCAACTGACGACACAACATGCCGGATTTGTTTGAAGGAAGGAAAAATGATGATCTCCATCTTCCATAATGAAGGAGATATTAAGTATAATGATAAGATTTCTCAATACGCGGGTGTTATCATAACAGAGAACGATGGATTCCCTTCGTCAATCTGCTGGACATGTGAGGCGGATTTATCCACCACTTGTGACTTTATCACAAGATGCAGAGATTCTGATAAGACATTACGAGAATCCCAGTCGGGTGTAGCTATTAAAATAGAATTTGAAAAGGTTGAAAGTGCGGACGAAGACTTTCCTGAACATGATGTCCTAGATGTTGAACAAAGTCAGATGGCGATTAAAGAAATACAAGAAGATGAAGTAAAGTCAAAATTTAAAGCCCAAAAAAAGAAGATTATGGAGAAAGAATGTAAAATGAGTATTAAATTGGAATCTTCTGAAACTAAATGTCCTGTATGTGGCTTGAAGACTTCTAGTATGGCTGCTCTATTAACTCACATGAGATGTCATACGGGGGAAAAACCATTCAAATGTGCTCACTGTGACTCCATGTTTACTACAAAAGGGATCTTGAAGGCTCATTTAATCAGAAAACATTCCGAAGAAATAGGTAATGTGCGGAAAAAAAACTTTGCTTGTGAGGTTTGTAAAGCGAAATTCTATACCAAACATAATCTGGGAGTTCATTCACGAATACACACGGGTGATCTTCCCTTTGCTTGTGATCTATGTCCTAAGCGTTTCACTCAGCAAACTAATCTCATGAATCATAGAAGAATACACACAGGTGAGCGGCCATTTAAATGTGATTTGTGTGGAAAGTGCTACAGCGACAGGTCTACACTACGAGGACATCAAAATGTTCACAGCAAGGAACGCAAATTTATTTGCAATGTTTGCGAAAAAGCATTTAAATCTAAAAACTCATTAAGAACACATTTGTACATGCACACTGATAAAGACAGAAATAAGTCTATAATGTGTGAAGATTGTGGTAAAAGTTTCTCGACCAAAGGCAATCTTACACTTCATATTAAAAGATTACATTCCGAAAAATCTGGAACATGTTCTGAGTGTGGCAAAGATTGTAGCAATATTGTGAAGCACATGCAGACTCATTGGGAGACTAAGTTTGTGTCACAAGAGCCCTCCAATGCTAGTGCATGGGAAAGTCATTTAACGTGTGCCATGTGTAAAATGATATTCTCTACCCAGCCTGATCTTGACGGACACTTGTGTAGCGACACAGCTGATCTCCCATATGCTTGTGGTTTATGTACCAAAAGTTTCTCACGGGAAAGTTGTTGTATGAAACATCAAAAACTGCACACTGAAGCGTGTCCTTATAAATGTGAATTTTGTGTAAAAAGTTTCACCGATAGTTCTACACTACGAGAACATCAATATGTTCACAGTAAAGAGAAAAGGTTCACGTGTGATGTTTGTGGGAAAACTTTTAAAGCTAAAAACTCAATGAGAGTACATCTGAAGGCACACACAGACACAGAGTCTGTAATGTGCAAAGAATGTGGAATAAAGTTCTCAAGTAAAGGTAATCTTGGCATTCATCTCAAAAGACTTCATTGTGAAACATCTGGCACATGCACGGAGTGTGGAAAGCGTTGCGGCAATATTACGGAGCACATGCAAACTAACTGCCACATGATGTCAGAAGAAGGGACCTTGGTGACTCATGGAGTTTCCAAACATTCGGATAAATTGTGTCATGTGCGGGAAAAATGTTTTTCGTGTGAAGTGTGTGGAATGAGATTTATTTCCAAGTACAAGTTACAAACACATTTGCGTAAGCACACCGGTGAGCTTCCTTATGGTTGTGAGTTATGTGGTAAACGCTTCACACAATCAGCTACTCTTATAAATCACAGAAGAACACATACGGGTGAACGCCCATTTAAATGTGATTTATGCAACAAGTCTTTTACTGATAGATCTACACTACGAGGACATCAAACTGTTCACACTGAAGAACGCAGATTCACTTGCGACATTTGTGGTAAAGCTTTCAAAGCCAAAAACACGTTAACCTCACATTTACGAATGCACAGAGAAGCAAACTCCGTAATGTGTGAAGAGTGTGGACTAaatttctcaacgaaaggcaaTCTTACACTGCACATTAAAAAGCTACATTCCGAAACATCTGGAGCATGTACTGAGTGTGGAAAGCGTTTCAGTAATATCGCTAAGCACACGTGCAAGCCAAACACAAAGCCTACACATAGTTGTACACTGTGTGGGAAGATATACCGTGCGAGAAAAAATCTCAGAAATCATATGAAAAAACATGTCAAAATTGCTAAGGAGGATTGA
- Protein Sequence
- MDSATDDTTCRICLKEGKMMISIFHNEGDIKYNDKISQYAGVIITENDGFPSSICWTCEADLSTTCDFITRCRDSDKTLRESQSGVAIKIEFEKVESADEDFPEHDVLDVEQSQMAIKEIQEDEVKSKFKAQKKKIMEKECKMSIKLESSETKCPVCGLKTSSMAALLTHMRCHTGEKPFKCAHCDSMFTTKGILKAHLIRKHSEEIGNVRKKNFACEVCKAKFYTKHNLGVHSRIHTGDLPFACDLCPKRFTQQTNLMNHRRIHTGERPFKCDLCGKCYSDRSTLRGHQNVHSKERKFICNVCEKAFKSKNSLRTHLYMHTDKDRNKSIMCEDCGKSFSTKGNLTLHIKRLHSEKSGTCSECGKDCSNIVKHMQTHWETKFVSQEPSNASAWESHLTCAMCKMIFSTQPDLDGHLCSDTADLPYACGLCTKSFSRESCCMKHQKLHTEACPYKCEFCVKSFTDSSTLREHQYVHSKEKRFTCDVCGKTFKAKNSMRVHLKAHTDTESVMCKECGIKFSSKGNLGIHLKRLHCETSGTCTECGKRCGNITEHMQTNCHMMSEEGTLVTHGVSKHSDKLCHVREKCFSCEVCGMRFISKYKLQTHLRKHTGELPYGCELCGKRFTQSATLINHRRTHTGERPFKCDLCNKSFTDRSTLRGHQTVHTEERRFTCDICGKAFKAKNTLTSHLRMHREANSVMCEECGLNFSTKGNLTLHIKKLHSETSGACTECGKRFSNIAKHTCKPNTKPTHSCTLCGKIYRARKNLRNHMKKHVKIAKED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -