Basic Information

Insect: Ceraclea dissimilis
Gene Symbol: -
Assembly: GCA_963576895.1
Location: OY756358.1:24315135-24317726[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00024 0.011 16.6 0.2 1 23 86 108 86 108 0.98

2 27 0.46 21 6.2 3.6 1 23 114 136 114 136 0.95

3 27 0.0025 0.11 13.4 2.1 1 23 142 164 142 164 0.96

4 27 5.5e-05 0.0025 18.6 3.5 1 23 170 192 170 192 0.98

5 27 6.4e-05 0.0029 18.4 1.8 1 23 197 219 197 219 0.98

6 27 4.1e-05 0.0019 19.0 1.0 1 23 225 247 225 247 0.98

7 27 1e-05 0.00045 20.9 2.2 1 23 253 275 253 275 0.97

8 27 1.5e-06 6.5e-05 23.5 0.7 2 23 282 303 281 303 0.97

9 27 0.017 0.78 10.7 2.7 1 23 309 332 309 332 0.96

10 27 3.5e-06 0.00016 22.3 3.8 1 23 364 386 364 386 0.98

11 27 0.03 1.4 10.0 1.6 1 23 391 414 391 414 0.96

12 27 0.00043 0.019 15.8 5.7 1 23 420 442 420 442 0.98

13 27 8.5e-06 0.00038 21.1 1.0 1 23 448 470 448 470 0.97

14 27 1.3e-05 0.0006 20.5 1.3 1 23 476 498 476 498 0.97

15 27 4.4e-07 2e-05 25.2 0.5 2 23 505 526 504 526 0.98

16 27 0.00041 0.019 15.8 0.1 1 23 532 554 532 554 0.98

17 27 4.3 1.9e+02 3.2 0.5 2 23 562 582 561 582 0.90

18 27 0.00077 0.035 15.0 1.9 1 23 588 610 588 610 0.98

19 27 0.00096 0.043 14.7 0.2 2 23 616 636 615 636 0.95

20 27 0.00043 0.02 15.8 0.6 1 23 642 664 642 664 0.98

21 27 3.3e-05 0.0015 19.3 0.6 1 23 669 691 669 691 0.96

22 27 0.00026 0.012 16.5 0.4 1 23 697 719 697 719 0.98

23 27 5.3e-08 2.4e-06 28.1 2.2 1 23 725 747 725 747 0.99

24 27 0.00019 0.0087 16.9 3.3 1 23 753 775 753 775 0.98

25 27 0.0035 0.16 12.9 0.6 1 23 781 804 781 804 0.96

26 27 0.008 0.36 11.8 3.0 1 23 810 832 810 832 0.97

27 27 0.00028 0.012 16.4 1.0 1 23 838 861 838 861 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00024	0.011	16.6	0.2	1	23	86	108	86	108	0.98
2	27	0.46	21	6.2	3.6	1	23	114	136	114	136	0.95
3	27	0.0025	0.11	13.4	2.1	1	23	142	164	142	164	0.96
4	27	5.5e-05	0.0025	18.6	3.5	1	23	170	192	170	192	0.98
5	27	6.4e-05	0.0029	18.4	1.8	1	23	197	219	197	219	0.98
6	27	4.1e-05	0.0019	19.0	1.0	1	23	225	247	225	247	0.98
7	27	1e-05	0.00045	20.9	2.2	1	23	253	275	253	275	0.97
8	27	1.5e-06	6.5e-05	23.5	0.7	2	23	282	303	281	303	0.97
9	27	0.017	0.78	10.7	2.7	1	23	309	332	309	332	0.96
10	27	3.5e-06	0.00016	22.3	3.8	1	23	364	386	364	386	0.98
11	27	0.03	1.4	10.0	1.6	1	23	391	414	391	414	0.96
12	27	0.00043	0.019	15.8	5.7	1	23	420	442	420	442	0.98
13	27	8.5e-06	0.00038	21.1	1.0	1	23	448	470	448	470	0.97
14	27	1.3e-05	0.0006	20.5	1.3	1	23	476	498	476	498	0.97
15	27	4.4e-07	2e-05	25.2	0.5	2	23	505	526	504	526	0.98
16	27	0.00041	0.019	15.8	0.1	1	23	532	554	532	554	0.98
17	27	4.3	1.9e+02	3.2	0.5	2	23	562	582	561	582	0.90
18	27	0.00077	0.035	15.0	1.9	1	23	588	610	588	610	0.98
19	27	0.00096	0.043	14.7	0.2	2	23	616	636	615	636	0.95
20	27	0.00043	0.02	15.8	0.6	1	23	642	664	642	664	0.98
21	27	3.3e-05	0.0015	19.3	0.6	1	23	669	691	669	691	0.96
22	27	0.00026	0.012	16.5	0.4	1	23	697	719	697	719	0.98
23	27	5.3e-08	2.4e-06	28.1	2.2	1	23	725	747	725	747	0.99
24	27	0.00019	0.0087	16.9	3.3	1	23	753	775	753	775	0.98
25	27	0.0035	0.16	12.9	0.6	1	23	781	804	781	804	0.96
26	27	0.008	0.36	11.8	3.0	1	23	810	832	810	832	0.97
27	27	0.00028	0.012	16.4	1.0	1	23	838	861	838	861	0.93

Sequence Information

Coding Sequence: ATGGATCGTCTCAACAATGTCCAAGCGGTGAAGGATGTTCGAGTTTGTTTAATGAAGGAAGACTATATTGATGCCATGCTTTTGGAAATGAAACATGAACGTGAAGATGACATAAACTGTAACATCATTAACTCTATTACTCCATATGAGGATATTGATATCTATGAACCGGATATAAAGACCGAGTGTGAGACGAACAAGGATCTCACTACAGAACCACTAGCATCTGTAAAAATACAAGTCTGTAAAAAGCGTTTTGTTTGTAATATCTGTTTAATGCCGTTTACTCGAAAACAAAGTTTAGTCGCACACAGTCGAATCCACAAAGGTGACAAACCATTCGAGTGTTTTACTTGCAAGAAGAAATTCAAATGTACAGCCGATTTGGAAGTGCACAAACAAGCTCATAAGCCGGAAAAACCGTTTGAATGTGacatttgcaagaagaaattcaAAGCAAAATGTTCTTTGATATATCATCTAGGAATTCATACAGGGGAAAGAAATTACGAGTGTGAAATATGTAATTTGAAGTTTATACGTCCACACCATTTAACCAGCCATAAGAAAATTCATTCCGATGTGCAGtacgaatgtaatatttgctcGCAGAAATTTAAAAGATCGTCTGTATTAAAGGATCATCGTTTGAGACACTACGGTGAGCAACCGTTTGAATGCGAAGTTTGCAATAGGAAATTTTTTAAACGTGCAAGTTTGAACTTACACATGCGAGGTCACACCGGTGATCAACCTCACGTTTGCGACACTTGCGGAAAAAAGTTCAGTCGACTGAAAGATTTGAAAATGCACGAAAGAATACACACGGGTGAAAAAAATTCCGTATGTAAAATTTGTAACAAGAGATTTATTCGGCAATCGGCGTTAAATGTCCACCTAAAATCCCACTCTGATGTTAAGCCGTATCATTGTGATAAATGTACCAACGAGTATAAGACCAAAGGAGGTTTGACTCTTCATATAAAGCAACGCCACGAGGGAGTAGTTCAAGAGTGCgatgtttgttttaaaaaaatatcactatattattacaatacccACAAGAAGTTACACACTGGTGAATTGTTGCACAAATGTGATACGTGCGATAAAAAGTTTGTCAATTCGACATCTTTAAAACAACACATGAAAATCCACAGAAGAGTACCTCATGAATGTGAAATATGTAAGATGGAGTTTGAAACAATGAAAAATTTACAATTTCACGTCAGGAAAGTTCATAGTGACCCAAAGCCACACCAATGTGATATCTGCTCCAAGAAATTTAAATTTGCTCATAAATTAAAGAACCATCAGTTAATCCATTCTGGTGAACATCCGTACGAATGCCAAGTTTGCGGCAAGAAATTTAATCAACGGGGCAATTGGAAATTACACATGTATAATCACACCGGCGATCGACCACACGTTTGCGACACTTGCGGAAAGAAATTCAGTCGCTTGGGAGATTTGAAAATGCACGAAAAAATACACACGGgtgaaaaaaatgttcaatgtgAAATTTGTAACAAGAAATTTATTCGGCAATCGGCATTAAATTGGCACCTAAAAACTCACACCAATCTTAAGTCGTATTATTGTGATGTATGCGGGAACGGGTATAAATCGAAAGCAGGTTTAGAAGAACATATAAAGCAACATTACAATGCAGTAGAATTACAAGAGTGCGATatttgctttaaaaaaatatcaccgcAATATTTAGATACCCACAAGAAAATACACACGGGTGAGAGATTGTACAAATGCAAAATGTGCGATAAAAAGTTTACTACGATGGCAATTTTAAGATCACACGAGCGAAACCATAATAAAAGATTATTAGAGTGTGATATTTGCGGgaaaaaattcattaaaaaatatctaattgtACATATACTAACACACAGTAAGGAAAAAGCTTATCAGTGTAGTATTTGcatgaaaatgtatacaagtCTGTCTTCATTGAATGAGCATGAACTGACTCACCAAGAGAAGAAATATGAATGCGAcatttgtaaaaagaaattcagGAAATTATCAGGTTTGAAGGCGCATGAGCTGTTACACAGCAATGACAGGCAGTATGAGTGTGATGTTTGCGAGAAGAAATTTACCACCGCTAGTATTTTGCGAAACCATAAGCTTGTTCACGGTCCTCAGGAATATTTCAAATGTGAAATTTGCGATAGGGTGTTTAATAGATTATCAAATTTAACCAAACACAAACGAACTCATACTGAGGAGCCAAAGTTTGAATGCAATTCTTGCGATAAAAAATTCTATAATTCGTATCGCCTAAATCAACATAGACTAACGCATACTGGTGAGAAACGCTTTGAGTGTGATATATGCAAGACGAAGATGTCGCGTTCGGGAGATTTATTGAAACATAAGCGACTCGTTCACAATGGTGAGAGACCTCACGAATGTGGTATTTGCAAGAGGAGGTTCGGAAAAGTTCACTATTTGAAGGTGCACGAACGTattcacactggagaaaaaccttttgagtgtgatatttgcaaCAGGAAATTCTCCATAAAACAGAATCTAAAATATCATATCGTACAAACTCACAATTACTGA
Protein Sequence: MDRLNNVQAVKDVRVCLMKEDYIDAMLLEMKHEREDDINCNIINSITPYEDIDIYEPDIKTECETNKDLTTEPLASVKIQVCKKRFVCNICLMPFTRKQSLVAHSRIHKGDKPFECFTCKKKFKCTADLEVHKQAHKPEKPFECDICKKKFKAKCSLIYHLGIHTGERNYECEICNLKFIRPHHLTSHKKIHSDVQYECNICSQKFKRSSVLKDHRLRHYGEQPFECEVCNRKFFKRASLNLHMRGHTGDQPHVCDTCGKKFSRLKDLKMHERIHTGEKNSVCKICNKRFIRQSALNVHLKSHSDVKPYHCDKCTNEYKTKGGLTLHIKQRHEGVVQECDVCFKKISLYYYNTHKKLHTGELLHKCDTCDKKFVNSTSLKQHMKIHRRVPHECEICKMEFETMKNLQFHVRKVHSDPKPHQCDICSKKFKFAHKLKNHQLIHSGEHPYECQVCGKKFNQRGNWKLHMYNHTGDRPHVCDTCGKKFSRLGDLKMHEKIHTGEKNVQCEICNKKFIRQSALNWHLKTHTNLKSYYCDVCGNGYKSKAGLEEHIKQHYNAVELQECDICFKKISPQYLDTHKKIHTGERLYKCKMCDKKFTTMAILRSHERNHNKRLLECDICGKKFIKKYLIVHILTHSKEKAYQCSICMKMYTSLSSLNEHELTHQEKKYECDICKKKFRKLSGLKAHELLHSNDRQYECDVCEKKFTTASILRNHKLVHGPQEYFKCEICDRVFNRLSNLTKHKRTHTEEPKFECNSCDKKFYNSYRLNQHRLTHTGEKRFECDICKTKMSRSGDLLKHKRLVHNGERPHECGICKRRFGKVHYLKVHERIHTGEKPFECDICNRKFSIKQNLKYHIVQTHNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -