Cdis004890.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceraclea dissimilis
Gene Symbol
-
Assembly
GCA_963576895.1
Location
OY756361.1:19900212-19921807[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.00015 0.0068 17.2 1.6 1 23 403 425 403 425 0.97
2 24 0.24 11 7.1 2.9 1 23 431 454 431 454 0.97
3 24 0.00031 0.014 16.2 0.2 1 23 461 483 461 483 0.98
4 24 1.8e-05 0.0008 20.1 3.6 1 23 489 511 489 511 0.99
5 24 8.6e-06 0.00039 21.1 5.6 1 23 517 539 517 539 0.99
6 24 6.4e-05 0.0029 18.4 5.3 1 23 545 567 545 567 0.97
7 24 3e-05 0.0014 19.4 5.1 1 23 573 595 573 596 0.95
8 24 2.6e-05 0.0012 19.6 6.5 1 23 606 628 606 628 0.98
9 24 0.00017 0.0079 17.0 6.7 1 23 634 656 634 656 0.97
10 24 0.00017 0.0076 17.0 4.3 1 23 662 684 662 684 0.97
11 24 1.1e-06 4.7e-05 24.0 3.0 1 23 690 712 690 712 0.98
12 24 1.5e-05 0.00067 20.4 7.7 1 23 718 740 718 740 0.98
13 24 2.5e-05 0.0011 19.7 6.4 1 23 746 768 746 768 0.98
14 24 1.9e-06 8.5e-05 23.2 5.0 1 23 774 796 774 796 0.98
15 24 6e-06 0.00027 21.6 4.3 1 23 802 824 802 824 0.97
16 24 9.3e-07 4.2e-05 24.1 3.0 1 23 830 852 830 852 0.99
17 24 7.3e-07 3.3e-05 24.5 5.9 1 23 858 880 858 880 0.98
18 24 7.4e-07 3.3e-05 24.5 3.8 1 23 886 908 886 908 0.98
19 24 1.7e-07 7.7e-06 26.5 4.3 1 23 914 936 914 936 0.98
20 24 4.1e-05 0.0018 19.0 7.6 1 23 942 964 942 964 0.98
21 24 0.00012 0.0053 17.5 6.8 1 23 970 993 970 993 0.95
22 24 0.00023 0.01 16.6 0.3 1 23 999 1021 999 1021 0.97
23 24 0.19 8.5 7.4 4.6 1 23 1031 1053 1031 1053 0.98
24 24 0.00013 0.0058 17.4 3.0 1 23 1059 1081 1059 1081 0.96

Sequence Information

Coding Sequence
ATGAACGGTGAACAACATAATATAGGTGCGGGGACGTCTCAGACAAGTGATAATTCGGAGACTCAGCGCAATGATCAAAATCAGCAACAACAACAGCAGATTATGTCCGTGGCAACTTCCACTGCGGGCGGAGCCACGGACGTCCAACGGGTCAATTCTGCGGCTGTCAATGTCGTGTTGTCGAGCGTGGCCAAATACTGGATGTTCACCAACTTCTTCCCCACACCTCTCTCTCAAGTCTCCGTCTATGGACTGCCAGCGGGAACCACGAGAGTTGAAAATGGAAAACCTATACAGGATATACTACAACAGCATGGGGCGAATATTCTCAATGGAGATCCCGGACTAGTGCTGCAGCATGCCGGGACGCAGGGACAGGGGCAAGTGCAGGCGGGGGGGCAGATCAGTTTGAGCAGCACAACTCAGAGTATCGCCAACATATCAATACCAACCAATGCCTTACATCTGGATGTGGCGGCCGCTCTCTCCCAACAGGCTGCAGATGCTGGACAGATGCAGCAACAACAGGCGCAGCAACAGAACAACATGCAGCACAACACGCATCAGCAACACACACAACAGAGCTCCAGTCACCCCCACACTCAGCAAGCACTCCTCCCACAACACTTGAGAATAGATCAACACGCCCAACAAATCCAACTGGCTGTGAGTGAAGACGGTATGGTGACTGTGGTGGAGCAGAACCAGCCCAAGGTGGGGAAGGAGGAGATGGAGGGGAACGGTGAGCAGGAAGTGCCGGCCCTCACGGTACAACAGCTCCAACAGATTGTGGGACAACAGGTGATTGATGGAGTGGTGAGGATAGAACAGGCGGGCGAGGGGACCAATATCCTCGTGGCGCATCAGAATCCAGATGGAACCACAACCTTGCAACATCCCAAGGACGAAAAAGTCAAAGGATTGGATCTCAAGAGCCTTCAAGGAGGGCAGCTGATGGACGTAAGGACAGCAGACGGCTCCATAGTGAAGATAGCCACGGGACCTCTGCAAGCGACAGACCATGACATACACAACATGTACAAAGTCAATGTGGAGGATTTCTCGCAGCTGTTGGCCTATCACGATGTATTCGGAAAGATTACAACAGAAACCAAGGTGCTAACGCAGGAAGACGAGACCGAAGGTGCTGGGGCGACCGTAACCGAGGCAGAAAACAATCCCACGGCAGCTGGACCCCCGGGAGTGCATCCCTGTGACCTCTGCGGGAAGATATTCCAATACAGATACCAACTCATAGTGCATAGGAGGTATCACACAGAACGTAAACCCTTCACGTGCCAGGTGTGTGGTACGGCCTTTGGTTGTGAGGCAGATCTGAGTAGGCACTCCAAGACGTGTCACCTCCCAGTGGGCAGCATGTATTCTTGTTCAGTGTGCTATCAGGCATTTGCTAACGCAGCTACTTTAGAGAAACACGCCAAGCGTCACACGCAAGATAAACCGTACACTTGCACTACTTGCCAAAAGAGCTTTGCCCGTAAGGAGCACTTGGACACCCACGTCAGGAGTCACACTGGAGAGACTCCTTACAGGTGCCAATACTGTTCCAAGACGTTCACTCGCAAGGAGCATATGGTGAATCACATCAGGAAGCACACGGGGGAGACGCCCCACCGCTGTGACATCTGCAAGAAGTCCTTCACCAGGAAGGAGCACTTCATGAACCACGTCATGTGGCATACTGGTGAGACCCCGCACGTGTGCACGGTGTGCGGGAAGAAGTACACGCGCGCCGAGCACCTGGCCAACCACACCAGGTCTCACCACACACAAGACTCGGGCCAAGTGCCCACCTTCCAGTGCCACGTCTGCTCCAAGACTTTCACCAGAAAAGAGCACTTCACCAACCATCTCATGTGGCACACTGGGGAAACACCTCACCGCTGTGACTTCTGCTCCAAGACGTTCACCCGCAAGGAGCACCTCCTGAACCACGTGCGGCAACACACAGGAGAGTCCCCTCACAGGTGCGCCTACTGCGCCAAGTCCTTCACGCGCAGGGAACACCTGGTCAACCACGTCAGGCAACACACGGGCGAGACTCCCTTCAGGTGCACCTACTGCCCCAAAGCTTTCACCAGGAAGGATCATCTCGTGAACCACGTGAGACAACACACGGGTGAATCACCCCATAAATGTACATACTGCTCCAAGAGTTTCACCCGCAAGGAGCATCTCACCAACCACGTCAGGCAACACACGGGGGAGTCTCCCCACAGGTGTACATACTGCCTCAAGTCATTCACCAGGAAGGAACATTTGACCAATCACGTCAGgattcacactggcgaaactCCCTTCACCTGTACATACTGCACCAAGGCGTTCAGTAGGAAGGAGCACCTCACCAATCATGTCAGGAGACACACGGGAGAGACTCCGTTCGCCTGCACCCTGTGCTCCAAGTCTTTCAGCCGGAAGGAACATCTCACATACCACATCAGGAAGCATACTGGTGAGACTCCATATAGTTGTACCTACTGCACCAAAGCATTCGCTAGGAAGGAACACCTCAACATTCATATCAGGAAACACACGGGTGAGACGCCGTTTAGCTGTACGTATTGCACCAAGTCATTCAGTAGGAAGGAACATCTAACTAATCATATCAGAAAACACACTGGAGAAACTCCATTCAGTTGCACCTACTGTCCCAAGTCATTTGGAAGGAAGGAGCATCTCACCAATCATATCAGGAAACATACGGGTGAAACTCCATACAGTTGCACGTACTGTCAGAAGTCGTTCAGTCGGAAGGAGCATCTCAACAATCACATCAGaGTTCACACTGGAGAGTCACCACATCGTTGTGAATTCTGCCAGAAGACCTTCACTCGCAAGGAGCATCTGAACAATCATCTCCGCCAGCACACGGGCGATACTCCACACTGCTGCAACATCTGCTCTAAACCCTTCACCAGGAAGGAGCACCTCATCAACCACATGAGCCGCTCCCACACGGGAGACAGGCCCTTTGCCTGCGAGGAGTGTGGCAAGACCTTCCCCCTCAAAGGAAACCTGCTGTTCCACCAGCGATCCCATAATAAAGGTGGGCAGGTCGATAGGCCCTTCCGATGTGATCTCTGCCCCAAGGACTTTATGTGCAAAGGTCATCTAGTATCACACAGAAAGTCTCATACAGGGGACAAGCCCCACGCTTGCGAACACTGCGGCAAAACGTTCGTAGAGAAGGGCTACATGTTGAGACACGTCCGCAAACACGAACAAGAAGCCGAGGCCGCACAGCACGCGGCCGCCGAAGTGGTTGTCGTCGTGGAGGGCGGCACAACCGCCACCGCTACGGCGGAAGCAATCCAGCAACACCAGCAGGCTCAGCAACTCATGCACTTGGCCGGAGCCCAACAGCAACCGATCAAGGCGGAGTTGATGCATCTTACGGCTCAACCCATAAAGGCGGAACTTATGCATCTAGCGACGCAACAACAGCAGCCAATCAAAGCCGAGACGTACGTCATGTCCGAATCGGGAGGAAGAACAGTGTTGCATCACCATCAGGACGTCAACCAACAGCAAGCCATGCCGCACCATCCAGTGGTAGTCAACTATTGA
Protein Sequence
MNGEQHNIGAGTSQTSDNSETQRNDQNQQQQQQIMSVATSTAGGATDVQRVNSAAVNVVLSSVAKYWMFTNFFPTPLSQVSVYGLPAGTTRVENGKPIQDILQQHGANILNGDPGLVLQHAGTQGQGQVQAGGQISLSSTTQSIANISIPTNALHLDVAAALSQQAADAGQMQQQQAQQQNNMQHNTHQQHTQQSSSHPHTQQALLPQHLRIDQHAQQIQLAVSEDGMVTVVEQNQPKVGKEEMEGNGEQEVPALTVQQLQQIVGQQVIDGVVRIEQAGEGTNILVAHQNPDGTTTLQHPKDEKVKGLDLKSLQGGQLMDVRTADGSIVKIATGPLQATDHDIHNMYKVNVEDFSQLLAYHDVFGKITTETKVLTQEDETEGAGATVTEAENNPTAAGPPGVHPCDLCGKIFQYRYQLIVHRRYHTERKPFTCQVCGTAFGCEADLSRHSKTCHLPVGSMYSCSVCYQAFANAATLEKHAKRHTQDKPYTCTTCQKSFARKEHLDTHVRSHTGETPYRCQYCSKTFTRKEHMVNHIRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHVCTVCGKKYTRAEHLANHTRSHHTQDSGQVPTFQCHVCSKTFTRKEHFTNHLMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCAYCAKSFTRREHLVNHVRQHTGETPFRCTYCPKAFTRKDHLVNHVRQHTGESPHKCTYCSKSFTRKEHLTNHVRQHTGESPHRCTYCLKSFTRKEHLTNHVRIHTGETPFTCTYCTKAFSRKEHLTNHVRRHTGETPFACTLCSKSFSRKEHLTYHIRKHTGETPYSCTYCTKAFARKEHLNIHIRKHTGETPFSCTYCTKSFSRKEHLTNHIRKHTGETPFSCTYCPKSFGRKEHLTNHIRKHTGETPYSCTYCQKSFSRKEHLNNHIRVHTGESPHRCEFCQKTFTRKEHLNNHLRQHTGDTPHCCNICSKPFTRKEHLINHMSRSHTGDRPFACEECGKTFPLKGNLLFHQRSHNKGGQVDRPFRCDLCPKDFMCKGHLVSHRKSHTGDKPHACEHCGKTFVEKGYMLRHVRKHEQEAEAAQHAAAEVVVVVEGGTTATATAEAIQQHQQAQQLMHLAGAQQQPIKAELMHLTAQPIKAELMHLATQQQQPIKAETYVMSESGGRTVLHHHQDVNQQQAMPHHPVVVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-