Cdis014312.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- -
- Assembly
- GCA_963576895.1
- Location
- OY756372.1:5153732-5156476[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 1.4e-08 1.4e-05 25.4 0.1 3 44 40 80 38 80 0.96 2 9 1.7e-13 1.6e-10 41.2 0.4 1 44 131 173 131 173 0.95 3 9 1.4e-13 1.4e-10 41.4 0.6 1 44 223 265 223 265 0.93 4 9 8.7e-12 8.6e-09 35.7 0.4 3 44 320 361 318 361 0.97 5 9 3.7e-13 3.6e-10 40.1 4.6 3 44 395 435 393 435 0.96 6 9 1.9e-13 1.9e-10 41.0 0.5 1 44 493 535 493 535 0.96 7 9 1.2e-12 1.2e-09 38.5 0.9 1 44 593 635 593 635 0.93 8 9 1.5e-10 1.5e-07 31.7 1.4 3 44 693 733 692 733 0.96 9 9 3.4e-12 3.4e-09 37.0 2.6 1 43 782 823 782 824 0.92
Sequence Information
- Coding Sequence
- ATGAGTACCTCGTTAACTGTtgatgaaaattattatcaacaatCTCCGGCGTTTGAGCATAGTGATGCCAATGATGGGAGTGTTAGTGAAGTTAAATGCATCAAAAAGAAGAGACTACTTTGGAAATATTTCGTCGAAAATCCGATAACTAAATTTGCTATTTGCACAGCTTGTCTTAAATCGTTGCCATACAAAATTTCAACGGCAACTCTCAAAACGCATTTGGAACTCGTGCATCCGCCTTTGTATGAAGAATTTATGTCGGAGAAACGGAGCCAACAGTCGGATAGTGCACAGAGTGGAATAAAATCTAGCGATGACAGTTCATCGGAATCTGAACATGGTGATGGAAATGCTAAAGGCAACAGCTCTGCAGCAAATAAAAGATCTTCAGCACTATGGAAATATTTCGTAGGAAATCCTGTAACCAAATTTGGTGTTTGTAACATTTGTCGTAAATCTGTAAACTACAAATCTACAACAACGAATCTTAAATCGCATTTACAACGCGTGCATCCTCAGGTATACGAAGAATTGATGTCAAATACCTCAGTAGAATCTGTATGTGTTGATGAAAACTCAGGGCAACCGACACCATCTGAGCATAGTGATGATGGCAATGGTGAAGATATTGGTAAAGGGAACAGCTCTGCGAATAAAAGATCTTCAGCCCTATGGAAATATTTCGTAGAAAACCCGGTAACAAAAATTGGTGTTTGTAACATATGTCATAGAACTGTATCTTACAAAACTACAGCAACGAATCTTAGATCACATTTACAACGCGTGCATCCTCTTGTGTATGAAGAAATGCTTTCGATGAAACAGTCAGATAGTGCAGTTAGTGAAAGCATGTTAAAATCTCGTAACGACAATTTACAACAACCGTCGACCTCTGAGCATAGTGATGAAGATATTAGTGACAGCAAAACAACCACACAAAAGAGCAATTCTATAATTtggacatattatattataaagaatcGGGAAGATAAATCAGCCATTTGTAACGCTTGCGATACAATTATATCTTATGAATCATCTATAACCAACCTCAAAACGCATCTACGACTAAACCATCCTCATGTATATCAAGATTATATTTCGAAAATACCTTCTGTTGATAATTCTGTAGAAGATATAGATGCAAACAAGTTGACTGGaagaacaaataataaaatgatttggAAACACTTCGTTCAAAATCCGATAACTAAATACGCCACTTGTAACGTTTGTCATAAATCTGTTTCTTACAAAAATTCTACATCAAATCTAAAAACGCATTTACGATTCAAGCATCCTCAGGCGTATGAAAAATTGTTATCAAGTACCTCATTAGATATTGAAGTTAAAAGCTCCGTAGAATTTGTGTCTATTGGTGAAGACTCAGGACAATCATCACCATCTGAGCATAGTGATGATGGTAGTGGTGAAGAAATTGGTAAAGGCAACCGATCTGGAGGTAAAAGATCTTCAGCACTATGGAAATATTTCGCAGGAAACCCGGTAACAAAAATGGGTAGTTGTAACATTTGTAGTAAATCTGTATCCTACAAATCTACAACAACGAATCTTAAATCGCATTTACAACGCGTGCATCCCGAGGTGTACGAAGAACTGGTATCAAATACCTGTGCAGATAGTGAAGTTAAAAACTCGGCAGAATCTGAATGTGTTGATGAAAACTCAGGGATACCATCACCATCTGAGCATAGTGATGATGGTAGTGGTGAAGATATTGGTAAAGGCAACAGCTCTGCAACTAAAAAATATTCAGCACTATGGAAATATTTCGTAGAAAACCCGGTAACCAAAATTGGTGTTTGCACCATTTGTCATAGAAGTGTATCTTACAAAACTACAATAACGAATCTTAAATCGCATTTAAAACGCGTGCATCCTTTTGATCATCAGGAAATGCTTTCGATAAATCAGTCGGAGAGTGTAGTTGGTGAAAGCACGTCAAAAACTCGTATTGACAATTTACGACAACCGTCGACCTCTGAGCATGTTGATGGTAACGGTAAAGATATTAATGATAGCCAAAAAACATCACACAAGACTAATCCTGTGATTTGGAAATATTATATAAGGAATCGGGAAACTAAATCTGCCATTTGCAAAGCTTGCGATAggcttataaattataaatcgtCAACAACAAACCTAAAAGTGCATTTACGACTAAAGCATCCTCGTATATATCAAGATTTGGTTTCGAAGATACCATCTGTTGAAAATACTGTAGAAATCACGCTCACTGATTCACGACAACCCTCGCCATCTGAGCATAGTGATGATGGTAATGCTGAATTCAACTGCtctgaaagaaataataattcagaACTTTGGAAATATTTCGTAAGAAATCGGGCAACCAGAATTGGCGTGTGTAATATTTGTGGTAAATCAGTATCTTATAAAACTACAATATCAAATCTTAAATCACATTTACGACACGTGCATTATCGTGAGTATCAAGAATTGGTTGCGGCGCAACAGTTGGACGCTGCTGTAGATCAAAACCCTCTGGAAATTACATTCACCGATGAAGGTTCGACATTTGCATCGAAGTTGAAGAATGAGAATGGagataatacattttatatcgTCAGTGCTGATGCTTTAAATCAACAATTCATTTCTGAAGATGATGACATAGAGAATCCAAAGGTATGTACTTATTTACTTATCCATTCATCCCTCCTTATCAACAACGGCAACAAAATTACACGTTTATAA
- Protein Sequence
- MSTSLTVDENYYQQSPAFEHSDANDGSVSEVKCIKKKRLLWKYFVENPITKFAICTACLKSLPYKISTATLKTHLELVHPPLYEEFMSEKRSQQSDSAQSGIKSSDDSSSESEHGDGNAKGNSSAANKRSSALWKYFVGNPVTKFGVCNICRKSVNYKSTTTNLKSHLQRVHPQVYEELMSNTSVESVCVDENSGQPTPSEHSDDGNGEDIGKGNSSANKRSSALWKYFVENPVTKIGVCNICHRTVSYKTTATNLRSHLQRVHPLVYEEMLSMKQSDSAVSESMLKSRNDNLQQPSTSEHSDEDISDSKTTTQKSNSIIWTYYIIKNREDKSAICNACDTIISYESSITNLKTHLRLNHPHVYQDYISKIPSVDNSVEDIDANKLTGRTNNKMIWKHFVQNPITKYATCNVCHKSVSYKNSTSNLKTHLRFKHPQAYEKLLSSTSLDIEVKSSVEFVSIGEDSGQSSPSEHSDDGSGEEIGKGNRSGGKRSSALWKYFAGNPVTKMGSCNICSKSVSYKSTTTNLKSHLQRVHPEVYEELVSNTCADSEVKNSAESECVDENSGIPSPSEHSDDGSGEDIGKGNSSATKKYSALWKYFVENPVTKIGVCTICHRSVSYKTTITNLKSHLKRVHPFDHQEMLSINQSESVVGESTSKTRIDNLRQPSTSEHVDGNGKDINDSQKTSHKTNPVIWKYYIRNRETKSAICKACDRLINYKSSTTNLKVHLRLKHPRIYQDLVSKIPSVENTVEITLTDSRQPSPSEHSDDGNAEFNCSERNNNSELWKYFVRNRATRIGVCNICGKSVSYKTTISNLKSHLRHVHYREYQELVAAQQLDAAVDQNPLEITFTDEGSTFASKLKNENGDNTFYIVSADALNQQFISEDDDIENPKVCTYLLIHSSLLINNGNKITRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -