Cdis001339.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- clz9
- Assembly
- GCA_963576895.1
- Location
- OY756359.1:299892-302204[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-08 8.9e-05 22.5 0.0 1 35 8 42 8 47 0.91
Sequence Information
- Coding Sequence
- atgGCACCTAAAAAAGATTATACGCCTCAACAAATGAGCTGGGCTATTGAAGCTGTTCGAAAAGGCGTAAAAATATCCGATGCAGCTAAAAAATTTAACGTGCCCAGAATAACTTTGCACAATAAAATGACCGGAAAAAGTCCTATAGAGTGCTCAATGGGACCCAGTACAATCTTGTCAAAGCAAGAAGAGGATATACTAGAAAATTGGATCAAAGATATGGCAGATAAACATATCCCAATAACGAAAGAAGAATTGTTAGACAGTGTCCAACGTATAATAGTCGACAAAAAGCAAGAGACTCCTTTCACTAAGAGCAGACCAGGCAAAAAATGGTATTCCTCGTTTATGAAACGACATCCTACGATTGCTGAACGTACTGCTCAAAATTTATGTACAGCAAGAAATAACGTTACTCAAGAGGACATTGAGAAGTGGTTTTCAGTAGTTGAAGGTGATTTAAAAGATAGAGGACTGGCTGAGGTACTGAAAAATCCTGAAAGAATATTCAATACAGACGAgagtgcattttttttaaatcctaaACCAGGACGTGTCCTTGCTAAAAAGGGAGATAAAAATGTGTATGCTTCTTCAGGCGACGACAAGGAAAACTTAACAGTTCTAGTTACTGGAAATGCAGCAGGAGATCTGGCACCTACCCTGGTAGTTTACAATTATGCCAGAATACCATCTTCTATTTCAGACCCATACCCTGATGATTGGGCTATAGGTCGCTCAGAAAGCGGATGGATGTGCGCAGGAACATTTTATGAATACATGACCAGTGTTTTTAATCCTTGGctagaaaaacaaacaaatattgcaaaaccaattttatttttcttggaCGGACACAAATCTCATTTAACTTTGCACCTGTCCAATTTCTGCTCTGACAATGGTATTGAAGTCATAGCACTCAATCCAAATTCCACGCACATCCTACAACCAATGGATCTGGCTGTCTTCAGGCCTTTAAAGTTGTCATGGCGGGAAGCGGTGAAGACCTGGAAGATGCGAAATTTGGGACAAGTCCTCAAAAAACACCACTTTGCTCCAGTTTTAAAGCCAGCTGTTGATTCAATTACTGTTGAAACAATTAAAAATGGATTTAGGGCAGGGGGACTGTACCCATTTGGTCCAGAATACGTAGACATGAGTAAAATCAAATCTCAAAACAGACAGAAAGCCGACTCTACGTGCCAAAGCGAATTTTTGAAAACATTGGAGAACAAAATTGAAACAATTTTGTCTAGTGAAAAATTGAAACTTTTTAAAGATCTATATTTCAAAAGTCGCCATGAAATAGAAAATCTTCTGCCTGACGGAGGCATATCTCTATACTTGATTTGGGCCAGTAGTAAACAAACACCCAATCATGATGTAGGAAATGAAGAAACAGTACCCAATACCTCTGTTGAAAAGTCAAATCCCTTGTCAGAAAccaataatcaaaatattaacgATACTCCAATAGAAAACGGAACAAGTGCTGTCTTGTCTCATAATATAAACGATTCCGAACCAAGCAAAGCTTCACAAAACACTTGTTTAAGTCTCAATACTTCAAATGAGCCAAATGTAGGCCAGGgagatttacaaatttataattCTTTACCAAAATCTAGTGACAAAACACCTATTAAGATTGTTTGTCCTGGCACTTCAAATTGTGTGATACCATCGCCTTTTAAACGAAACTTATTTTGGCCAGAAACAgatgaaacaacaaaaaataagaaacgcaaattaaaagagaaaattcCATTTACGATTACAAGCCCTGCATGGAAGGCATACCATACCAAGAAGGAAGAAGAGAAAAGGAAACAAATAGAAGAAAAGGAATTGCGAGCAAAAAAACGAGAAgaaaaaaaactggaaaacattgataagaagaaaaaagtgacaaaacaacaaaaaaacagaTCTGAATCGTCTGAAACAGAGACTGAAATAATTTACGCAGAAAGTGATGAAAGTGTCATGTCTGATGGATCGGAATCGGACGACACACCATTGAATATGTTGGTCTCTTCCCGACAGCAACTATCGAAGGGAAGTTATGTAATAGTTTTATACGAAGGGCAACATTTTCCTGGagtaattgaaaatataaataaggaCGAGTTTGAAGTAAGCACGATGACATTTTCAACAGGAAACACCTACAAATGGCCAGAGAAACCTGACTTAATGTGGTACCAAAGAAAAGATATCGTGGAGCATATCTGTCCTCCAATTCTGATAAACAAAAGAGGATTTTTTACTGTTaaagaaatggaaaaatacTCCGTTTTTAcatcttaa
- Protein Sequence
- MAPKKDYTPQQMSWAIEAVRKGVKISDAAKKFNVPRITLHNKMTGKSPIECSMGPSTILSKQEEDILENWIKDMADKHIPITKEELLDSVQRIIVDKKQETPFTKSRPGKKWYSSFMKRHPTIAERTAQNLCTARNNVTQEDIEKWFSVVEGDLKDRGLAEVLKNPERIFNTDESAFFLNPKPGRVLAKKGDKNVYASSGDDKENLTVLVTGNAAGDLAPTLVVYNYARIPSSISDPYPDDWAIGRSESGWMCAGTFYEYMTSVFNPWLEKQTNIAKPILFFLDGHKSHLTLHLSNFCSDNGIEVIALNPNSTHILQPMDLAVFRPLKLSWREAVKTWKMRNLGQVLKKHHFAPVLKPAVDSITVETIKNGFRAGGLYPFGPEYVDMSKIKSQNRQKADSTCQSEFLKTLENKIETILSSEKLKLFKDLYFKSRHEIENLLPDGGISLYLIWASSKQTPNHDVGNEETVPNTSVEKSNPLSETNNQNINDTPIENGTSAVLSHNINDSEPSKASQNTCLSLNTSNEPNVGQGDLQIYNSLPKSSDKTPIKIVCPGTSNCVIPSPFKRNLFWPETDETTKNKKRKLKEKIPFTITSPAWKAYHTKKEEEKRKQIEEKELRAKKREEKKLENIDKKKKVTKQQKNRSESSETETEIIYAESDESVMSDGSESDDTPLNMLVSSRQQLSKGSYVIVLYEGQHFPGVIENINKDEFEVSTMTFSTGNTYKWPEKPDLMWYQRKDIVEHICPPILINKRGFFTVKEMEKYSVFTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00726305;
- 90% Identity
- -
- 80% Identity
- -