Basic Information

Gene Symbol
qui-1
Assembly
GCA_963576895.1
Location
OY756359.1:11679195-11689945[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.1e-09 6.8e-06 26.1 0.0 1 40 16 55 16 59 0.93

Sequence Information

Coding Sequence
ATGCCTCGAAAGTATGAAAGAATATCGAATAGAGGCATGTCTTACACCAAAGATCAATTAAATAATGCCGTGGAAGAAGTGAGGTCAAAAAGAATGAGCGGATATCAAGCcgcgaaattatttaaaataccgAGAATGACGCTGATGGACCATGTGAATGGAACACATGGAATTAAATCCAAATCAATGGGGAAACCAACTGCTTTACCCCTagatgaagaaaaaaatatagccGAAACCCTTCACATATTGGAAAAAAACGGGTTCGGATATTCTAGAAAGGAATTATTGGAGTTAGTTGGGGATTACGTCcaagcaaataaaataaaaactcctTTCAAAAATGGTGTACCAGGACACGATTGGTTCGCAGCATTTTCAAAGCGTAATGGGCTTTCGATTAAAAAGCCGCAAGCTGTAGAATTGGCCAGAAAACAGGCCTGTGATCCGTTCATAATTAAGGAGTATTTCAATTTATTGAAGTCCAAATTAGAAGAACTTGATTTGGTTGACAAACCAGAACAAATATGGAATCTGGATGAGTCAGGCTTCTCTCAAGATCCGTCGAAAACAAAAATTGTTGGACGACGTGGCTTCCAGTGCACGCGTACGACAAGTTCTTCTGGGAGGCAAAATACCACTGTATTAATGTCATGTAACGCAGCCGGTGGGAAAATGCCCCCTTTAATCGTATTTAAAGGAAAAAGCGTCTGGGATCAATGGACAGCAAATGTTCCAGAGAAGAAGGCGACGTATGCGGCAACGAAAAATGGGTGGATGGAAAAGGAAGtgttcaaaaattattttatccgaAGTTTTTTGACATCCATTGGCGATAAAAGACCTGTCCTTTTAATCTATGACGGACACAAGTCACACATTTCATTGGATCTCATAATGGAAGCTCGCCGACAAGAAGTTACAATATTAAAACTTCCACCGCATTCCAGCCATTTGCTTCAACCAGCTGATTTAAGCGTTTTCAAGTCATTAAAAACAATGTGGGATGCAAATTTGGTAAACTGGTACAGGTCTAATTCTGCCTCGAAATTACCGAAAAAACAGTTTTCGAGGATAATTCTAAAAACCTGGGAAGATCTAGACAGCAATATCATAAGAAATGGGTTTAAAAAAGCCGGAATTTACCCATTTGATGACGGTGTCATTCCCGACAGTATGTATGACGCTGATGCATTGAAGCGATGGCAAATCCATAATACTCGACCACCACCCTTACCTGCTATTAACACGGAAGAGACAAGACTCGACTTTTTAAATGTAAATGGGATATCGACAATGGAGAATTACGAAGATATGATTGACGATattgaaaacattaattttgaatgtttttcGTCTACATTGGAAATGAATGAGCTTAACGGAGAACAAGTAGGTTCAATGATACCTGACAACATTGTCACAACTCCAACAGAGGTGAACATGGAAATTACACCAAATTTCCACCTTTCATCAACACCTTCCATTGAGaatcaacaaaataatttgtttgaagATGTGGATCCAATAGCATCAACATCAAAAATGCAGCTTTTAAATTCAACAACTGAATTTCCGATGTTTTCTGCTGATAGTTGCAACATTCTGCACGCCAATCGAAACACTTCGGTCTCAGAAGTCGTCCTAAAATCAGCAGAAAATACGATGCATACATCATTCGAACAAATTCTATTACAAAAACTTAAACGGAATAGTTCTAATGTTACTGCTAAAgtaaaaaaagtacgaattgCAAATGGCGCTGAAGTAATTACCGATGATGAGGTAGTAAAACGTTTGACTGAAATGAAagaaaacgaaattttaaaacacgataaaaagaaaacaaccaTACGACgtacaaaaaacaaaagaaatcaagagaaaaaaaaagacaacaaaacaaaaaagatgCTTAAAACAATGACTAAAAAAAGGAAGCATTCCTCGTCCAGTTCAGAAGATGGCTCCTTTTGTATGTCACCAACATCTTCTGACGAGGAGAACTTAATATTCGACTTATCTTCAGAACTCGAAGACGAGAATGTAAACGACCCATTAGAAATAGAGAAGACGGTTGTAATGCCACCAGACAATCTGGAAAATATTAACATTGATGACTGGATTGTTGCTAAGTTTTCAACCAAAAATTCTatcaaacattttgttggtaaAATTTTAAGTATAAACGAAGAAGGAAAACCTGTTGTTAAATTTAccagaaaaaagaaatttcaaaaaattggttcaCAAAATAAGACATTGTTCTGTTTCCCGAATATTGATGATATTTCTGATGTTCACACTAGAGATATAGTTGCCATTCTTCCAAAACCTATACTTTTAAGAAGAGGTGAAATTATGAATTTAACAACAAATAGAAAAGATATGTATGGTGAAAGACAGAGTGTAATAGACATTTTAACTAAATGTATTGAAGAAATCACAAAAGACTGCGATCCAAATAATCCAGATGTTATAATGTATAGTGAGTTATTGCAAAGTTGTACAGAGAGACACGCTCAATTCGTTCTAGatattttgaaTACTAGTAATAAGCAAAGTGGTGTTATAGTAGTAATGAAGGAGTGTAAAGACAATCAAAAGAAGGAATTATCTAACAAATGTGATATTTTAGCACAAGCACGTCTTAATAAATTACAtgaaaactttaaaaatattctacCTGAAGACAATTTTCTACATATAACATGTCCTCAGAGTAACCAAGAAGAAGCAGAGTCTCCATGTCAGGACTCATACTTGACTGATTTTAGAGAGTCAATTCAAAAGGCACTTGAACGTCTCATTACATTGGATCTGAGTGAAGAGCCCGACTGTGGGAAAGGAAGAAAGAAAACTATTCAGGAAATATTCCAAGAACATCTTACGCACATGTCAATGTTTCAAAATCATTTACAACGTCAGCAGTTAGATTTACCAGAGTTAGTGAACTTCACAGagcaaataaaaaatcaaatgtatTCAAATTATACGTCTCAAGTAAAGCACCCACCAATATTAATATATGGACCTCACAGTTCTGGAAAAACAACATTACTCTCGCATTTATATGAAAGCTGTGAGACTTTGTTCAAAAAACCTGTTCTTAGAATTATTAGATTCTCTGCAGCAACTCCACGTTCTGTGTATAATTTAGAATTGCTTCGAGTCGTTTGCCAACAAATATCAATCATACTCAAAATACCTGAAGGATACCTTCCTAAAGATGCCAGCTTTGATCCCTTGTATATCAACAATTGGTTTCAAAGTTTGCTCAGAAGGTGTGAAGACATGGATAATGAAATATTACTAATTTTTATAGACAATATTCATAAAATCAATCCACTGGAATGTGATATAGTGACGGGATTATCCTGGTTACCCATTATATTGCCAAagaatgttttcattatttgcACTAGTTCCATTCCCGTAGAACAATTACAATTTACTCaagtacaaaaagaaaaatataagacAAGTGGATCTTACTTTCAAATATGTAAACCAAGTCATCTAGAAGATTCTGATAAATGTTTAGATGAGTTAGAAAATCGATTTGGACATCTGGCCTTTAGTAAACTAGCCAGGTATATTACCTGTGCAGAATTTGGCTTGACAGAAACAGAACTTCTGGAATTATTAATGCCAACATCAAACAGTTATGCAACAATAAGTTTACAAGATGGAAATTTTAATTTCTCCACATTATGTGCTGTGAAGAGGCAAATGGATTCACTCATAATGGATAAATACATGTCTGGGAAACTAACAGTTGTGTGGCGCTCAGCTAGAATATCTGATGCTGCAAGAAGACGCTATTTATCCGCTCAGGAACCATTGAGAGCTGCGCACCATGAAGTTGCTAATTTATTCTTTAGCCAGTTTGAAGAAACTGAAGACACTCCATCTGATACAAGTGAAGCTGGTGAAGTGAAAGAGGAAGTGAAGCCAGAAGGAGAAACTGAAGGAACTCCTTTCCAAAGTGCAAAACATTCATCAGCTCCATTTACACAAAGACATGTGGAGGAATCTTGGTTACACTTACTGTTAGCTGGTGACTTCACAAGATTAAAAGATCTCACTATTTGTAATTTCGACTTTTTACATGCGGCTGTACAGACAGTTACAATATCCTATCTGCGATGTATCTTGGAACATGTTAGGTGTTACATAATTGACAGAGATATTGAATTGGTTTATAACGCTGTGAGAAAGTCTAGTGATATATTAACTAGAGACCACATGCAGCTAGGGGCTCAGATAATTAGTTGGTTGCGTCCTGTATTGGTGGAGTCTCAAGGTGCTCTCAGTACTCTCGTGACTGCTGCCATGGCGTGGTGTGATGGCTACACAAAACCACTACTGGTTCCTTTAAATGGATGGGTTCAGCCTCCCATAGCTGCCACAGTGAAAGTATTACAAGTGGCGGGTGGAACGAGATTACTAGCATTGGCCCCTACAGGTCAACATCTACTTCTAGCACCTGAGAAAGGAGACCCACAATTGATGCATATCATGTCCAACTCACTTGTTCATACATTCAAAGGTCACTCTGGTCAAGTTCTCTGTATGGCAGTCACCAAAGAATCACAGTTTTTATTAACTGGATCTGAGGACACAACAATTATTGTATGGGATCTTCAAACATTGGGTATCAAAATGAAAATAGCTGAACATATTGCTGCGGTTCTATGCTTAGCCTGTGTGGTAAATCATTCTCTAATTGTAAGTGGTGGAGAGGATTCTGCTATAATAATCACATCCCTAGCAGATGGCTCattaATAATGAAACTTGATCATCATCGTGGTCCTGTCACTGGAATTAAGGCGACTCAGGATGGAGACGTTCTGATCTCATGTTCCCAAGATGGCACAGTGTGCGCCTGGTCCTCTGAGACATTCCAGTTGTTAAACACAATATATTCCTTCAACAGATCTCCAATTCACATGATGGATCTCTCAGATGATTCAGTATTCCTGGTTACATTAGAAGGAAATAATGATATTAGAGTTCGAACATTCATTACCGGGACAGATCTTCATACTTTACCAAAACAAAAGTCTCAGGTGATTTGCCTTCATGTGTCTCACGATAGTTCCCGGCTAGTGGTGGGCCTAGGAGCAGGAGGAGCTTTGGTCTTCAGTCTTCATTCAGGGCGTCCACAACGTGCCTTGCCTCCTGCACAACCTGGACCATTGTCAGCATTGTTACTAACTGATCATGATGATTTCCTCTTTGCAGCTGGAGGTAACAGAGTTACAATATATTCATTCCGCACCGAAGATACTCTAACAAACTTTAGACCAATGGGTTACGAGGCAGACAAAAAGCCAGGAGCTGAAAGTATAGTTCGTATGCAGAGAGAACAAAGTGCTATCTTAACTCCAACCTGTGTAGCCGTGTCAGCTGATGGACAGTTAGCTGCATCAGGGTGTCCTCGAGGTGAAGTCAGAATATGGCGCATGGGGGCACCTGCTTTAGTGTCCAGTATCCCGGCACATACACGAACTGTTAATTGTGTTATCTTCTCTCCATCTAATTTAATGTTACTCACTGCATCTGAAGATGGAATTGTTCGTGTTTGGCTTCTACCAGATTGTACTCTCACCCTTACTTATAAGAATCATACAATGGGAGTTCAAGCAATAAGTATGCTACAAGATTCAAGGCGAGTGTGCACCGGAGACTCGGGTGGAATTATTCACTTGTGGTTGGCAGATAGTGGAATACTTCTGCAGTCTTGGGAGTATCTATGCACACATATCACAGTTACCAATAATATGAAGTTTGCTATTTGTTCCAATGTTGGTGAAAACTCAGCTCGTATTTGGTCCTTGAGTGGAGAAGAAGTAAAATGGAATGTCTGCCATCCCGAGCCGATAACATGTTGTGCTATTACAGTTGATTCTCTCTATTTAATAACGGGATCCAAAGATATGTCACTCAAAGTCTGGCAAGTCAACGGAGGAAAATTAGCTCAAGTATTGGTAGGACACACGGACATTGTAACATGTGTTGCAGTATCTGTTTCAAATAAAACCCAGGTGGTATCAGGATCATGggataataatttgattgtaTGGGATATTAATACAGGAAGTGATTTACATTTGTTGTCTGGACATTTAGGGAAAGTTATTTGTGTGCGAGTCTCTGGAGATGGAACAATAGCTGTTTCAGGAGCCGAAGACAGAACACTAATAGTTTGGGAAACAAAACGTGGATTAGCTCTAACATCTCTTCAATTACACACTTCACTGTTACGTTTTGAAATGGCAACTGACTGTGCTAGAATTGCTGTTCACTTGGTTGATAGAGGTTGTTTGCCAATAATATGTCTTCACAATACACCTGCAGTTTATGTGAAACTACCAACATATTCAGCACCCAAAGAAGTTGATGatcTCCGACCTCTAGCACCAAAGCGTCCAATGAAACGCTTGCTGAAGAAAGAAGTATCACTTGATACATATACTTGGCAAAAGAAATATGGCCATTTACAATCTTCAGCCATGATGGCACAAGTTGATGAACGACTCAAAAGAAGGTTTTCAGTATCAGCTTCCATGGAAGAAATATCTAAAATTCAACAAGAAAAGAGTAAAGAAATGGGATCtcaggGACTCGGACCGGAACAAGCTGCTCTTGCTCAGTCACAACATTTTGATCAACTCGAAGCTCTATGGAACAAAATATCCCCACCAAGACGTCGGTCACATAAATCTTTATCTAAGCAGAGCTCTTTAATAGAATCCAGATTTGATTCTTCAGAGGAAGATCATTCAGGTGGTGAAGAACATGAGCATATGGTGGATTAA
Protein Sequence
MPRKYERISNRGMSYTKDQLNNAVEEVRSKRMSGYQAAKLFKIPRMTLMDHVNGTHGIKSKSMGKPTALPLDEEKNIAETLHILEKNGFGYSRKELLELVGDYVQANKIKTPFKNGVPGHDWFAAFSKRNGLSIKKPQAVELARKQACDPFIIKEYFNLLKSKLEELDLVDKPEQIWNLDESGFSQDPSKTKIVGRRGFQCTRTTSSSGRQNTTVLMSCNAAGGKMPPLIVFKGKSVWDQWTANVPEKKATYAATKNGWMEKEVFKNYFIRSFLTSIGDKRPVLLIYDGHKSHISLDLIMEARRQEVTILKLPPHSSHLLQPADLSVFKSLKTMWDANLVNWYRSNSASKLPKKQFSRIILKTWEDLDSNIIRNGFKKAGIYPFDDGVIPDSMYDADALKRWQIHNTRPPPLPAINTEETRLDFLNVNGISTMENYEDMIDDIENINFECFSSTLEMNELNGEQVGSMIPDNIVTTPTEVNMEITPNFHLSSTPSIENQQNNLFEDVDPIASTSKMQLLNSTTEFPMFSADSCNILHANRNTSVSEVVLKSAENTMHTSFEQILLQKLKRNSSNVTAKVKKVRIANGAEVITDDEVVKRLTEMKENEILKHDKKKTTIRRTKNKRNQEKKKDNKTKKMLKTMTKKRKHSSSSSEDGSFCMSPTSSDEENLIFDLSSELEDENVNDPLEIEKTVVMPPDNLENINIDDWIVAKFSTKNSIKHFVGKILSINEEGKPVVKFTRKKKFQKIGSQNKTLFCFPNIDDISDVHTRDIVAILPKPILLRRGEIMNLTTNRKDMYGERQSVIDILTKCIEEITKDCDPNNPDVIMYSELLQSCTERHAQFVLDILNTSNKQSGVIVVMKECKDNQKKELSNKCDILAQARLNKLHENFKNILPEDNFLHITCPQSNQEEAESPCQDSYLTDFRESIQKALERLITLDLSEEPDCGKGRKKTIQEIFQEHLTHMSMFQNHLQRQQLDLPELVNFTEQIKNQMYSNYTSQVKHPPILIYGPHSSGKTTLLSHLYESCETLFKKPVLRIIRFSAATPRSVYNLELLRVVCQQISIILKIPEGYLPKDASFDPLYINNWFQSLLRRCEDMDNEILLIFIDNIHKINPLECDIVTGLSWLPIILPKNVFIICTSSIPVEQLQFTQVQKEKYKTSGSYFQICKPSHLEDSDKCLDELENRFGHLAFSKLARYITCAEFGLTETELLELLMPTSNSYATISLQDGNFNFSTLCAVKRQMDSLIMDKYMSGKLTVVWRSARISDAARRRYLSAQEPLRAAHHEVANLFFSQFEETEDTPSDTSEAGEVKEEVKPEGETEGTPFQSAKHSSAPFTQRHVEESWLHLLLAGDFTRLKDLTICNFDFLHAAVQTVTISYLRCILEHVRCYIIDRDIELVYNAVRKSSDILTRDHMQLGAQIISWLRPVLVESQGALSTLVTAAMAWCDGYTKPLLVPLNGWVQPPIAATVKVLQVAGGTRLLALAPTGQHLLLAPEKGDPQLMHIMSNSLVHTFKGHSGQVLCMAVTKESQFLLTGSEDTTIIVWDLQTLGIKMKIAEHIAAVLCLACVVNHSLIVSGGEDSAIIITSLADGSLIMKLDHHRGPVTGIKATQDGDVLISCSQDGTVCAWSSETFQLLNTIYSFNRSPIHMMDLSDDSVFLVTLEGNNDIRVRTFITGTDLHTLPKQKSQVICLHVSHDSSRLVVGLGAGGALVFSLHSGRPQRALPPAQPGPLSALLLTDHDDFLFAAGGNRVTIYSFRTEDTLTNFRPMGYEADKKPGAESIVRMQREQSAILTPTCVAVSADGQLAASGCPRGEVRIWRMGAPALVSSIPAHTRTVNCVIFSPSNLMLLTASEDGIVRVWLLPDCTLTLTYKNHTMGVQAISMLQDSRRVCTGDSGGIIHLWLADSGILLQSWEYLCTHITVTNNMKFAICSNVGENSARIWSLSGEEVKWNVCHPEPITCCAITVDSLYLITGSKDMSLKVWQVNGGKLAQVLVGHTDIVTCVAVSVSNKTQVVSGSWDNNLIVWDINTGSDLHLLSGHLGKVICVRVSGDGTIAVSGAEDRTLIVWETKRGLALTSLQLHTSLLRFEMATDCARIAVHLVDRGCLPIICLHNTPAVYVKLPTYSAPKEVDDLRPLAPKRPMKRLLKKEVSLDTYTWQKKYGHLQSSAMMAQVDERLKRRFSVSASMEEISKIQQEKSKEMGSQGLGPEQAALAQSQHFDQLEALWNKISPPRRRSHKSLSKQSSLIESRFDSSEEDHSGGEEHEHMVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-