Cdis010849.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- JARID2
- Assembly
- GCA_963576895.1
- Location
- OY756368.1:1776186-1783099[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-21 5.6e-18 65.5 0.0 5 89 11 93 7 93 0.92 2 2 3.3 9.7e+03 -2.6 0.0 25 41 471 487 457 488 0.69
Sequence Information
- Coding Sequence
- ATGCTACACAGATGGGGACCGTCGTCCAGACAGATGTGCGCTATCAAAAAGTATCTATCAACGCAAGGTGTCACGTTCAATCAACCTCCAAAGTTAAGCGGGATAGAAGTCGACCTACCGAAACTGTATCACGTTGTACAAAGCTTGGGAGGATTGAAACGAGTGTTGGAGAAGAAGATGTGGATGCGTGTCGCTGAGGAGATGTGTATTCCTTTCAATGCACATTACATGGACTTCAGATTAGatgaaatatattgtaaatactTGTTGCCTTATGATACACTTTCAAATGAGGAAAGACAAAAATTGTTTGAATCGGTGGACAAGGAATGGGAATTGAGATGGGGCAAGTTGATTGCCAGGGCTGCCAACCCGATGAACTGTCAAGAAGAGGAGGAAGATGACGGACGAGATGTTGCCATAGACGTGACGGAAGATATAGAGGAGTGTGTCACTAGAGGAAAGTCAACCACCTTAGGATCATTCGCACGATTAGCCAAGAATATCATCTCTATGCAGTTTGGGAAAACAGCTGAGCCAACCCCTGACGAGGTGGAAACAAAGTTTTGGGAGTATGTAACGAATCGTAACAGTCATATTTGTGTGAATTCTGGTTCAATAGACTCCAGCGTTTGGGGGTACGGCTTCCCAAGTGCTAAATCTAAGGGGAACAACATTGCTAAACATCCCTGGAATCTAAAGGTGTTGACAAACAACAGTGGTTCTGTACTCCGCTCACTAGGACCAATGGTTGGAGTCACGGCTCCCACTCTACATGTCGGAATGGCCTTCTCAGCTTGCTGTTGGTACAGAGATCCACATGGATTGCCTTGGATTGAATATCTACATCAAGGTGCCCCCAAAGTGTGgtaCGGAGTGCCGGCGTCTCACGGTCAGAAATTCCGTTCGGCACTCGCATCCATAGTTCCTGGCCTCTGCCAACAAAAGACCATCTGGTTATTATCTGATACGGCCATGGTCCCTCCATCACTGCTGACATCAAATGGTGTATCGCTTTGTAGAATTCTACAACAACCTGGGGAGTTTGTAATAGTATTCCCGAAGGCCTTCTCTTCAAGCATTTGTACCGGATATAGTGTTTCCGAAAGTGTGTACTTTGCACTACACACTTGGCTTCAAACTGCTCATCAAGATTTCACAGATATCAGGAACAGCTGTGAACCGTCAATGTTTTCACTGGAACGACTGATGGTAGCAATCTCCGAAGACCCGAGATCGTCTTATCAAGTACTGAAGCAAGTATTACCAGCTCTCAACAAGATCACACAGCAAGAGAAGCAACATAGGGAGACATTGTTTAACTTGGGACTGAAGACGTCGGAGCGAGCCCAGCTTACACTCACTGGTAAAAAGAAGATGGCGAAACGACAGGATGAAGCTGAGGAATGTCAACGTTGTAGAACTAACCTCTCGTTATCTATGTTGTATCACACGGTAGACAACATAGCCTATTGTCTCATACATGGAGCTGAGTATTTAGAAGCAAACAAAGATCAGACAGACAACTGCAAACTCATCTTCATGCATTCAATAGAAGAACTGCAAACCATTATGTCTAAGTTGATTCAGAGGATCAACAATCTGGCAAATAAGAAAGCAGGGAAAGGGAAGAATTAA
- Protein Sequence
- MLHRWGPSSRQMCAIKKYLSTQGVTFNQPPKLSGIEVDLPKLYHVVQSLGGLKRVLEKKMWMRVAEEMCIPFNAHYMDFRLDEIYCKYLLPYDTLSNEERQKLFESVDKEWELRWGKLIARAANPMNCQEEEEDDGRDVAIDVTEDIEECVTRGKSTTLGSFARLAKNIISMQFGKTAEPTPDEVETKFWEYVTNRNSHICVNSGSIDSSVWGYGFPSAKSKGNNIAKHPWNLKVLTNNSGSVLRSLGPMVGVTAPTLHVGMAFSACCWYRDPHGLPWIEYLHQGAPKVWYGVPASHGQKFRSALASIVPGLCQQKTIWLLSDTAMVPPSLLTSNGVSLCRILQQPGEFVIVFPKAFSSSICTGYSVSESVYFALHTWLQTAHQDFTDIRNSCEPSMFSLERLMVAISEDPRSSYQVLKQVLPALNKITQQEKQHRETLFNLGLKTSERAQLTLTGKKKMAKRQDEAEECQRCRTNLSLSMLYHTVDNIAYCLIHGAEYLEANKDQTDNCKLIFMHSIEELQTIMSKLIQRINNLANKKAGKGKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00178948; iTF_01024637; iTF_01086087;
- 90% Identity
- iTF_00178948;
- 80% Identity
- -