Csar005595.1
Basic Information
- Insect
- Cephus sareptanus
- Gene Symbol
- bab2
- Assembly
- GCA_030142515.1
- Location
- JARQTD010000439.1:1498262-1511734[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-12 1.5e-09 37.6 0.0 1 39 379 418 379 422 0.90 2 4 3.5e-12 4.5e-09 36.1 0.1 2 39 434 471 433 474 0.94 3 4 1.3e-18 1.6e-15 56.7 0.0 2 45 489 533 488 533 0.97 4 4 1.4e-18 1.9e-15 56.5 0.1 1 42 540 582 540 583 0.97
Sequence Information
- Coding Sequence
- ATGGAGTCCGATCAATTCTGGGGTATTCACTACAGCGGAGGCATGGCCGGGCAGCATTACTGCCTGCGCTGGAACAACTACCAGTCGAATATGACGTCCGTCTTTCATCAGCTCCTACAGACAGAGGCCTTCGTAGACGTGACCCTAGCCTGTAACGAAGCATCGTTAAAGGCGCACAAGGTCGTCTTGTCAGCATGCAGTTCctattttcaaaagttattGCTCTCCAATCCCTGCAAACATCCGACGATCATCATGCCGCAGGACGTGTGCTTCAATGATCTCAAGTTCATCATCGAATTTGTCTACAGAGGAGAGATCGACGTGTCCCAGGCAGAGCTTCAGTCCCTGCTCAAGACAGCCGATCAGCTGAAGATCAAGGGGCTCTGCGAAGTGCCAGAGAGCAAGGACGGTCCACCGTCGGTCAGCCTGAGCTCACCAGGTATAGAGTCAAGCACACCGCGGCTCAACTACACCAAACTGAAGAGGCACCATCCCAGGTACAAGAGACCCAGGCTCGAGCCCCGAACCGACTCCAGGCACTACGAGAAGTATAAAGAGGAAGAGGCCACCGAGGCCTTCGGTCGTGACGATAAGGAGAATCACAGGGGCTGGCAGACCGAGGATGAGGAGTGCGCAGAGGCCGCAGTAGTCCTGGAGTCCTGCCAACGTGACAACAACAACGGTAACAGtacaaataacaataacgGTGACATGTTTTGTCACACAGGGTTAGGTCACTACGGTCATCATCCGGACCCGGGAGAGGTCGATCTACCCCCTGAGACTCAGCCCACACCCCCCAGCGCTACTTTAGTTGGCACCACGATCACCCACCTGAGAGATCCCGATCATCACTCGACAGATATCCAGAATTGCGACAGTGTCAAGATCAAGTTCGAGACTTTGCACACGATGGATTCCTCGGATACGATCGATATCGATAGCCACATGTCGGACAGGGCGAGTGTGAGTTCGAAGAACGCTGTGGATAACGATAATATGATGATGATCACGCCAGAATTATTGGGCCTCATGCCGTCGGGAAGTTCGGTACATTCGGATTCCGGTGAGACTAATGCGAGAGGGCACTCGGGTCAGTCTGGCTCGCATCATCATGGTTCCAAGTCTTGGACGCAGGAGGACATGGACGCGGCCTTGGAGGCCCTTAGGAATCACGATATGAGTCTTACGAAAGCATCAGCAACATTCGGTATACCGTCTACGACCTTGTGGCAGCGTGCTCATCGTCTTGGGATTGATACTCCAAAAAAGGATGGACCCACCAAATCTTGGAGCGACGAGAGTCTGAACAACGCGCTGGAGGCACTCAGGACCGGTACCATCTCGGCTAACAAGGCTTCAAAGGCCTTTGGCATTCCCTCGAGCACCCTGTACAAAATTGCTAGGAGGGAGGGTATCAGATTAGCTGCTCCCTTCAACGCGAGCCCCACTACTTGGTCTCCTGCCGACCTGGACAGAGCCCTCGAGGCAATAAGGTCCGGTCAGACGTCGGTGCAAAGAGCTTCGACCGAATTTGGAATTCCTACAGGAACTCTCTACGGGAGATGCAAGAGGGAAGGCATCGAGCTCAGCAGAAGCAATCCGACGCCTTGGAGCGAAGACGCCATGACGGAGGCTCTGGAAGCTGTTCGATTGGGCCACATGAGTATCAACCAAGCAGCCATTCACTATAATTTACCATATTCATCCCTTTATGGACGATTCAAGAGAGGGAAGTACGAAGAACCTGTTGTCAGTGAAATGTCTCAAGATGGCGGCAGCCCTCACTATCATCAGAGTCCTAATCAGAATCACTCCACTTCTCTTCCCGATCAAATGCCCTATCAGGGCAGCTGA
- Protein Sequence
- MESDQFWGIHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESKDGPPSVSLSSPGIESSTPRLNYTKLKRHHPRYKRPRLEPRTDSRHYEKYKEEEATEAFGRDDKENHRGWQTEDEECAEAAVVLESCQRDNNNGNSTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAVDNDNMMMITPELLGLMPSGSSVHSDSGETNARGHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVSEMSQDGGSPHYHQSPNQNHSTSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00292363;
- 90% Identity
- iTF_00292363;
- 80% Identity
- iTF_00298439;