Basic Information

Gene Symbol
Arid4b
Assembly
GCA_030142515.1
Location
JARQTD010000491.1:615505-622449[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-28 4.3e-25 88.1 0.1 1 89 307 394 307 394 0.95

Sequence Information

Coding Sequence
ATGCTGGGAGACGATCCACCGTATCTGTCGGTGGGTACGGAGGTGAGCGCCAAATACAAAGGTGCTTTTTGCGAAGCTAAGATCAGGAAGGTCGTGCGATCAGTAAAGTGTCGAGTTACTTATAAACAAGGTTTGGGAACTGCTACAGTTACGGATGACCAGATTAAAGGTACTCTGAGAGTAGGTGCCTCTATTGAAGCCAAGTATGGAGAGCGAAAGGATTTTGTTGAGGCCACTATCACCAAGATTCAAGATTGTAGTCAATATACTGTAGTCTTTGACGATGGAGATATCACGACGCTCAGGAGGACGGCACTGTGTTTAAAAAGTGGAAGACATTTTGCTGAGAGTGAAACTTTGGATCAGCTTCCACTAACTCATCCGGAGCACTTTGGAAATCCAGTTATTGGTGGGCGCAGAGGACGACGTTCGAGGCAAGCGCAAGATGACAGCAGTGAGGATGAAGAAAGTCCTCCACGAGGAAGCCGCGATTCCGGTTCCGGATCAGGTGGAAAGGAGGGGACTGAAACGGAACCGGAAATTGGAAGAGTTGTTTGCGTCGAGCTGGGtgacaagaagaaaaaagataactgGTTTCCAGGACTCGTCGTTGCACCGACAGCTCAGGATACAGTCAGAATTCGTGTTCGCGACGATTATCTCGTGAGATCTTTCAAAGATGCAAGATATTACACCGTCCCAAAGAAGGAGGCAACTGAATTTACCAAGGAACTGGTGAACAAGGTCGAGAATAGCGCATTAAAGATTGCCGTGGAGAaggctcttctttttttggagAAGAATGACCTTCCACCTCACTGGGATCGAGATTCTCTCTTTGGAAATGCCATGTCCAGTGGAAACAGCGATTCCGATGGAGAGCTGGACTCTGATAGTTCGGACGATGAGCCGCGAGAGGAGAAGGACCACTTTGTTGCGcaattgtataaatttatggACGATCGAGGAACACCTATCAACAATTGTCCAATGATTGGCAACGAGGATATAGATTTATACCGTCTGTTTCGTGCTGTTTACAAGTTAGGCGGGTATAACCGTGTGACCAACCAGAATCAATGGAAATCCATAACCCGTCGCTTAAGTTTTTCAATGCCAAGTACGTCGTCCACGCACAATCTGGTGAAACAAGCGTATAAAAAGTTCTTACACTCTTTCGAGgacttttatagaaaattaggTTGTACTATGGTCAATCATCCTCGAGGTAGCACGCGAAAGCAACGGCCAGGTAGGAGCTTGATCAGAGATCGGGACAGAAACACTCCTGTACCACCTCAGATGCCAATGACCAAATctgagaaagaagaggaggacAAGAAGATAATGGAAGATGAGAAGAAGGAAGTGAAGAAAGAGCCTAAAAAGGAGATTATGAAGGAAGAGGAACCTGTCCCAGCCCCTATCCCAGTTATCACTACGCCGACgactattaaaataaagaaaaaggaggaaTTCGAGGAAAGTGGAAGTGGGCAGGATAGCGATATCAATGTTGAAGCTGAGGGAGAGTCTTCTAGCAGTGAAAAGTCACCTAAAACACCAACACGGTTTACCCCAGTGCCCAGTAAAACCAAATCGAAGAATAAGGAGGAGACAAAAAAGAAGCCCTTCGATAAGAAAAGGAATGAACCGAAGAAGCAGGAGAAGAAGGATGAGAAGCTCAAGGAAGACGAAGCTGCGAAAACACGATCCAAATCAAAGGATGACTCCGTTAAGGGTAAAGCATCTGGAACAACAGATACAGTCCGGGAGACGCGGACACCGTCCAGGGAGTCGGAGAAGAAGGCGCCTGCGAAGCAGAGACGTCTTACTGATGAAGAGTTGAGGAAGCAGCGTGGAAGAAAACGCAAGGAGAACGAACTAGAGAAATCTAGACCTGGTACAGATGATCATTCTAGCGAATCTGCCCCCTGCTACAAGGGTCTCGTCGAACTAGGTGATCGGTTGAAGGTCTATTATGGACCAACTCATGAATCGAAAGTCACGTATGAGGCCAAAGTAATTGACATGGAAAAGGATGGTGCTGAACCTGCTTATCTAGTTCATTACACAGGCTGGAACACGAGATACGATGAGTGGATCAAGGGATCGCGAATCGCACAAAATTTCACTCAAGCTCAAGGTAGAGTTAAGCGAACTAAGGCTACTCCTAGACCACAGACTCCAAGTGCAACGAGTTCTTCAGCTGGTGGAAAATCTTCTAAGACAGGTAACACTTCTAATTCTAATGCATCCCAAAACCGACGTAGAGCACAGAGTGTTGCACCTTCTTCTACATCATCTTCAGGGATTACAACTAAAGATGGTAAGAAGGAAGACAAGGATAAGGAGGGGTCAATGCAGCCAACTAGGTCTACGACACCACTTTCAGTAACAAGTTCCAGCTCCAGGACGAAAAGTCCTGCAACTCCAGCTGCTAATCGACTGACTAGACTTACCAGAAACACAGACCTCGCTGGAGTAGAGCTTCGGAGACGTACAAGGCGGATGTCTGGTCACACGGACATATCTGTTGCTTCTGAGAGTGAGGATAGCGAAGCGTACGAATCAGACACAACGGAGCCGGAACAGGCAAAAACAAGGTCACGTGGGAcggaagagaggaaaagaagggAAGTGAGACGTAGAGCCGAGGATAGGATAAAACCTGAAGACATGAGCGAGCCTGAAGAGGATAAGGATGCCTCGGAGGAACCACGTAGAGGTCGTAGACTGAGACGAATACCAGGTAAAATTCAGGATATCAAATCAGAACCTGAGAGTGACGAGGACCAACCCAAAGGCAGGGACTTTGATCTCAATCAAATAAGATCTGAATTAAAAGGTTTTGATAAAGCTGTAAAACTCGAGATTGTGAGATCCGATCCGGATCCGGAAGAAGAAGCGAAATctgaagaaaaagagaatgaggGTAAACCTGCAGCTACACCATCTGCATCTCTCTCACCGAAATTAGAAAAACCAAAGTTGGAACCGCCGAAGTTGGAACCAGTACCAGAGATCAGGCCTTTAGAAAGTACTGAGGATATTTATGAGTTCAAAGAACCGGAACCCTTCGAATTTGAAGTACGGAATAAGAGAGATTCCAATGGTGACAAGGATAAGGCCAAGAAGAGGGTCTTCGATGAGGAACCAAAGAGTCccaagaagaagcaaaagacGACTGTTACCGCTATGAAGGAAATAAAACCAGCTGATACTGAagtagataataaaaagagagtgagaagaccttttattaaaagaatagACGACGGCGAGGTCTTGTCCCCAAGTAAAGTTTCTACGCCATCTGCTTGTGAAGAGGCGTTCGACAAGCTTCGGGAATCTTCATCATTTAGCCAGCCTAAGGTTCAACCGATATCGGAAGAGTCTGGTAAGGTTGCTAATACTATTGACCTTCTGTTCAGCGACTTACCTGGCGACGAGGATGGGGCACCGGATGATCCGGAGGATCGACTGATCATATCTGAAACTGAAGTCTCTGAAGCCGAACAAGAAAACCTCTTCACCTATCAGCAGGAAATATTTCCAACAAACGACATACCGGATACGATGGAGTTTAACAGAGACGAAGTTAAGTCCCAGAGTGAAAATCCGAATGAAGAAACAGCAACCATAAACAAGATTGTTACCAAATTTGATGAGGTtaatcaaaaacaaaatgtgAAGTCACCAGCAACAAGTAGACCGTCGCCCATCTTAGAAGCAAAGAACCTGGACGTGAAATCATTAATCTCAAGCCCTGCAGTCTCGCCAGCACTGTTAACGCCAGCTCCTATAAGTGCAAGGTTGCCGGCCACGTCTACGATAGAGGAAAAAATGGCGGCTGCTGCAATGGCGTTTAAAAATAAGtcaaaagaaacgaagaaggaagaagatatGGCCGATGCTACGAAGAAGAGTTTAAAAGAGACGTCCAAGAAAATGGATGCTATGATTGCCAAAAGGAACAGAGAGGAACAGAATAAAGCGAAGATCGAGgctgagaataaaaagagggaagaagaggaagcattaaagaaggaagaggagcAACGAAGAGAGGCAATGCGTGCTGCCATTAAGCAGAAGGAGGAAGAGCTTCAACaattaaaactgaaaaaggAGGCTGAACTGAAGAAGGCTGCAGAGGCAAAGGCAGTAGCTGAACAGAGAAAagtgcaagagaaaaaagaagaagaacgcaagaagaaggaagaagagattaacaagaaagaagaggaggaagaacaGCATAAGGAACGTGAtcagcgagagagagataaacgCAAAAAGGTCATCAGTCAAGAGTTTGTCGATTCTACAGACAGCAGTGACTCCGACGAGAGGCTAGTCATCGATAATGAAGAGCCCCAGGATGAGAAAAATCTCACAACTAATTTCGATGTCAAGCTTCGAGCAGAATTGGAAAGGTTACAGGATATCCAGGAAGGACGTTCCAAATCTCAAACTCAAAGCCAATCGCAGCTACAAGTTCAAGCTCAATCTCAAATTCAACAACGATCTCAGCCACAATCCCAATCTCAACCTCAGCTTCAACTTCAGTCTCAAATTCAACCCCAGAGTCAGTCTCAGTCTCAAGTACAGCAATCTCAACCTCTACAGCAAGTTCCGTCTCAGCCACAGATTCAGTCCCAGCAACAACAAAAGTCCCAGCCTCCATTACAACCGCAGGCACAAAttcaacagcagcagcaacaacagtcTTCTGCAGAGTGTAAACTTGTCGGTGTCCTTCCGACAAAGATTGAGGAGGAAGGTGAGAACATGAGTTCATTGCTCTGTGAAGAAGAAATACCAGGATCTCCAGCTCCGGTGGTTGACAACACCGAACAAGTAGATACACACGTAGTTCAAGTTCCACCTAAGATTGAGACATCTGACAATAATATAGTACTATTGGAGATGCCATTTGCAAGTGCACCATCCTCCAGTCAAAGTACAACTTGTAGTACAGTGGCTACCCTGAGTATTACATCTCCAAAGAATGGTGACAATGTCTCCGTCCCTGTTTCGCTACCTGTACAACAGGGAGTTGTCATGGGAGTTAGGCAACAACAGCCCCAGCCATTACAACAGTCACAAAAACAACCCCAGccacaacagcagcagcagcaacaacaacatcaGCATCCACATCAACTAATTCAGCCACTTCCACCTGCTGCTATGCCAGTACAACGACGAGAGAGCAACGAAGCTGCTCCTGTCATGGACAACACGCCTCCGACTACTCCGGATTCAAGTATTTCTAACATTTCTGGTTCACCACGTGAAGAGAGAATGGGAGGATCTTCACCAATGTCAGAGGATAATCTCAAGTCCAACAGAGACAGTTCAGAAGCTGATAACGACAGTGGTAGCAAGGGTCCTGGTTTCAGTGAAGATGACACCCTATTAAATTCTGAAGGTAACGTCGCTGACAGATCCCTCAAACCACCGACGAAGAGGACCATTGAGGATGCGCAGTCGCCAAAGAAGCGAAAACGTAACCGGAAACACTCCGAATGTGGAAGCAACTCTATTAAGAAGTCTACCAGACAAGCCGGAAGAACCGTTCGGCATGGCCCCGGAAGTGACAGTGACGATACCAGCGAGAGTTCCAATCTCTGTGGCGTAAACTCGACTTCCACTGCACATACGAACATTGGCAGTGTTACCGATCTCAATACTTACTCCACTAGGTCACCAAGACCGATGAAGTATAACTTTTACGTAGAATTAGATCCTGAACTTGATGGCAGCCAGAGGATAGCTGTACTCCAGCAAAAATTGTCAGAATTGCGAAAAACATATAATGCAGTGAAGGTCGAATTGGCCGGCATCGAGAGGCGCAGAAAGAAGTTGAGGAGACGAGAACGCGAAGCTATGAAGGCTGCCAAGGCGGAGATGCAACAGGCATGTTCGTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDDQIKGTLRVGASIEAKYGERKDFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDDSSEDEESPPRGSRDSGSGSGGKEGTETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSALKIAVEKALLFLEKNDLPPHWDRDSLFGNAMSSGNSDSDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNQWKSITRRLSFSMPSTSSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSTRKQRPGRSLIRDRDRNTPVPPQMPMTKSEKEEEDKKIMEDEKKEVKKEPKKEIMKEEEPVPAPIPVITTPTTIKIKKKEEFEESGSGQDSDINVEAEGESSSSEKSPKTPTRFTPVPSKTKSKNKEETKKKPFDKKRNEPKKQEKKDEKLKEDEAAKTRSKSKDDSVKGKASGTTDTVRETRTPSRESEKKAPAKQRRLTDEELRKQRGRKRKENELEKSRPGTDDHSSESAPCYKGLVELGDRLKVYYGPTHESKVTYEAKVIDMEKDGAEPAYLVHYTGWNTRYDEWIKGSRIAQNFTQAQGRVKRTKATPRPQTPSATSSSAGGKSSKTGNTSNSNASQNRRRAQSVAPSSTSSSGITTKDGKKEDKDKEGSMQPTRSTTPLSVTSSSSRTKSPATPAANRLTRLTRNTDLAGVELRRRTRRMSGHTDISVASESEDSEAYESDTTEPEQAKTRSRGTEERKRREVRRRAEDRIKPEDMSEPEEDKDASEEPRRGRRLRRIPGKIQDIKSEPESDEDQPKGRDFDLNQIRSELKGFDKAVKLEIVRSDPDPEEEAKSEEKENEGKPAATPSASLSPKLEKPKLEPPKLEPVPEIRPLESTEDIYEFKEPEPFEFEVRNKRDSNGDKDKAKKRVFDEEPKSPKKKQKTTVTAMKEIKPADTEVDNKKRVRRPFIKRIDDGEVLSPSKVSTPSACEEAFDKLRESSSFSQPKVQPISEESGKVANTIDLLFSDLPGDEDGAPDDPEDRLIISETEVSEAEQENLFTYQQEIFPTNDIPDTMEFNRDEVKSQSENPNEETATINKIVTKFDEVNQKQNVKSPATSRPSPILEAKNLDVKSLISSPAVSPALLTPAPISARLPATSTIEEKMAAAAMAFKNKSKETKKEEDMADATKKSLKETSKKMDAMIAKRNREEQNKAKIEAENKKREEEEALKKEEEQRREAMRAAIKQKEEELQQLKLKKEAELKKAAEAKAVAEQRKVQEKKEEERKKKEEEINKKEEEEEQHKERDQRERDKRKKVISQEFVDSTDSSDSDERLVIDNEEPQDEKNLTTNFDVKLRAELERLQDIQEGRSKSQTQSQSQLQVQAQSQIQQRSQPQSQSQPQLQLQSQIQPQSQSQSQVQQSQPLQQVPSQPQIQSQQQQKSQPPLQPQAQIQQQQQQQSSAECKLVGVLPTKIEEEGENMSSLLCEEEIPGSPAPVVDNTEQVDTHVVQVPPKIETSDNNIVLLEMPFASAPSSSQSTTCSTVATLSITSPKNGDNVSVPVSLPVQQGVVMGVRQQQPQPLQQSQKQPQPQQQQQQQQHQHPHQLIQPLPPAAMPVQRRESNEAAPVMDNTPPTTPDSSISNISGSPREERMGGSSPMSEDNLKSNRDSSEADNDSGSKGPGFSEDDTLLNSEGNVADRSLKPPTKRTIEDAQSPKKRKRNRKHSECGSNSIKKSTRQAGRTVRHGPGSDSDDTSESSNLCGVNSTSTAHTNIGSVTDLNTYSTRSPRPMKYNFYVELDPELDGSQRIAVLQQKLSELRKTYNAVKVELAGIERRRKKLRRREREAMKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00295018;
90% Identity
iTF_01475231;
80% Identity
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