Basic Information

Insect: Cephus runcator
Gene Symbol: -
Assembly: GCA_030142495.1
Location: JARQTC010000334.1:13192-16981[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.5e-05 0.0026 18.2 1.4 1 23 442 464 442 464 0.96

2 8 1.3e-05 0.00097 19.6 1.9 1 20 470 489 470 492 0.94

3 8 9.6e-06 0.0007 20.0 1.2 1 23 498 520 498 520 0.98

4 8 5.1e-05 0.0037 17.7 4.4 1 21 526 546 526 548 0.95

5 8 1.6e-05 0.0011 19.3 4.6 1 23 554 576 554 576 0.99

6 8 1.6e-05 0.0011 19.3 5.3 1 23 582 604 582 604 0.97

7 8 6e-06 0.00044 20.7 7.1 1 23 610 632 610 632 0.97

8 8 1.9 1.4e+02 3.3 0.6 1 8 638 645 638 645 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.5e-05	0.0026	18.2	1.4	1	23	442	464	442	464	0.96
2	8	1.3e-05	0.00097	19.6	1.9	1	20	470	489	470	492	0.94
3	8	9.6e-06	0.0007	20.0	1.2	1	23	498	520	498	520	0.98
4	8	5.1e-05	0.0037	17.7	4.4	1	21	526	546	526	548	0.95
5	8	1.6e-05	0.0011	19.3	4.6	1	23	554	576	554	576	0.99
6	8	1.6e-05	0.0011	19.3	5.3	1	23	582	604	582	604	0.97
7	8	6e-06	0.00044	20.7	7.1	1	23	610	632	610	632	0.97
8	8	1.9	1.4e+02	3.3	0.6	1	8	638	645	638	645	0.95

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCATTGCCAGCGACTACGCAGGCTCAGCAAGAGGAAGTAAACTCGGGTCAAAGTGGTCGTCCTTCGTACCCAGGTGGTTCGACTAGTTCAAGCAGTCACAACAATGTAGGGAGCACCCGGAATTCCTCTGAGGAGCAGCGCGTAGGTACAGCAGTAGCGTTAGCCTCCTCGGTAGCTAAATATTGGCTCTTCACCAATCTGTTTCCCGGGCCGCTACCCCAGGTCTCGGTCTACCACCATAACCACCAGATCTCCTCAAGTAGGAGTGGTGGTGGTGTTGAGGCATCTCCAAAAGAGTCTTCGTTTAACCAGGAAATGGCGTTGACCTCGAATTCGCATCATCAGTCGACGACTtcgcatcatcatcatcatcaagcTTCGATTAGCGGCGTCGGTCATCACGGCTCTCTGCAGTCCAATCAGCAGATTCCAGGCTCTCTTCCTGGCCTTAGCCTAGACGGGACGCACATTCCCGCAAGTGTCAGTCACTTGCAGGCGGCGCATGCTCAAATGCAGCAGCAGATGCAGtcgcaacagcaacagcagcagcagctgcaCCAGCagccgcagcagcagcaacagcaacaacagtcTCATCATCAGGTGCAGCAGAGTCATCAGAATGCACAGAACAGTGGACCAAGCTCGCAGAGTCAGAACTCACAACGGGATGATAATAAAGTAAAGGACGAGGATGGTAGTTGCACTACGGAACGGTGCAGCGATAATCAAGTCCATTGTCAGGTCCAGTGTGATCTTCAGCTACAGCCGCCACAGGATCTTCAGCAGAGTCTCatgcagcaacagcagcagcagcaacaaatTGGCGTCAACATTAGCGGCAGTTCCACTGCGGAAAGCGGAACTCAGAACAATTCAGAGAAGCccgagaaggagaaggaaatgCGTCAGCTGAACATGGCACAGTTTCAACTTCCTGACCTTAAACCTGGTGGTCATATGATGGACGTTAGAACAGCCGACGGCTCGGTCGTTAAAATAAGTGCCGGAAACGAACAAGATCTAGCAAAGACTCTTGGCGTAGAGATGGTACAAAATATGTACAAGGTAAATGTCGAGGATATCAATCAACTGTTGGCGTACCACGAGGTCTTCGGAAAGCTGCAAAGTGAGATAGCAGCTGGCACCACTCTCGTAGGTGGTACCGTACCCACGCAAACGGTAACCACCATACAGAATGGAACACCGATAGTACAGCAAGTTCAACTTAACAAGTTTGACATAAAGACAGGCGACGGCGTGGCCACGCCCGGACCAAGTGCCTCGCCCGTATCCGTTGGTAGCCATGCCTGCGAGATCTGCGGCAAGATCTTCCAGTTTCGCTATCAGCTTATCGTGCATCGCAGATATCATACTGAAAGGAAGCCATTCACGTGCCAGGTCTGCGGAAAGGCATTCACCAATGCCAACGATCTAACTCGTCATGGTAAATGTCACCTGGGTGGATCCATGTTCACCTGTTCAGTCTGCTTCCACGTCTTCGCTAACGCGCCGTCCTTGGAGCGCCATATGAAGCGTCACGCTACCGACAAGCCCTACAATTGTACAGTGTGCGGAAAGAGTTTCGCCAGGAAGGAACATCTAGACAACCATACTCGCTGTCACACCGGCGAAACACCTTACAGGTGTCAGTATTGCGCCAAAACTTTCACACGCAAGGAGCACATGGTGAACCATGTTCGCAAGCATACTGGCGAGACTCCGCATCGCTGCGACATATGCAAGAAGAGCTTCACTCGCAAGGAACACTTCATGAATCATGTCATGTGGCACACTGGCGAGACTCCGCATCATTGCCAGGTCTGCGGGAAGAAGTACACGCGCAAGGAGCACCTTGCCAATCATATGCGTTCCCATACCAATGACACGCCGTTCCGATGCGAGATTTGTGGTAAGTAA
Protein Sequence: MNSEQHALPATTQAQQEEVNSGQSGRPSYPGGSTSSSSHNNVGSTRNSSEEQRVGTAVALASSVAKYWLFTNLFPGPLPQVSVYHHNHQISSSRSGGGVEASPKESSFNQEMALTSNSHHQSTTSHHHHHQASISGVGHHGSLQSNQQIPGSLPGLSLDGTHIPASVSHLQAAHAQMQQQMQSQQQQQQQLHQQPQQQQQQQQSHHQVQQSHQNAQNSGPSSQSQNSQRDDNKVKDEDGSCTTERCSDNQVHCQVQCDLQLQPPQDLQQSLMQQQQQQQQIGVNISGSSTAESGTQNNSEKPEKEKEMRQLNMAQFQLPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTGDGVATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNANDLTRHGKCHLGGSMFTCSVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00293219;
90% Identity: iTF_00293219;
80% Identity: -