Crja004372.1
Basic Information
- Insect
- Cephus rjabovi
- Gene Symbol
- gatad1
- Assembly
- GCA_030264185.1
- Location
- JASCRG010000401.1:304905-305820[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-09 1.9e-05 24.5 1.6 1 27 9 33 9 41 0.90
Sequence Information
- Coding Sequence
- ATGCCTCTGGGTCTGAAGCCCGAATGCGTACGGTGTGGTGTGCGTGAGACACCGCTCTGGCATGCAACTGATGCTGGTAACCTATGCAATCGATGCCTCGAGGATGAAAGAAGCGTCGGTGCCAATGGTAATTTAAAGAGtgaagaggatgaaaaaaacGGTTCCGCGAAACCATCCAGAAAGAGCACCAGAGTCACACGATATTGCAAGCCAAAGTCTAATGCACCCTTAAAAATCATTCCTAAAGGCAAAGGACGCCGTCACATCTTTAAAAAAACGCCTATTAAGGCACCAGCAGCTGTTGCGACTCCAGTAACCAGTGACTTTGTATTCTACAAAGGTTCCTATTTTCAAGTTGGAGACATTGTGTCCATGAAGGATATTGATGGTGGAATTTATTATGCTCAAATTAGGGGTCTGCTAACCGATCAGTATTGTGAAAAGAGTGCAGCAGTCACATGGTTACTGCCAACTACAGCCAGTCCACCTCCAGCAGATGGTTTTAGTCCGGAAACCTATATGATTGGACCAGAAGAGGATCTACCGCGAAAACTGGAATCTATGGAGTTTGTAATGCACGCGCCTTCGGACTATTATAAACTCAAAAACAGTCCGTATCCTCCGCCACTAACGGAAACGGGCACTGGTTACATATGGACATCACTCCGGCACGAAGTAAGCGCcagtaaaaagtaa
- Protein Sequence
- MPLGLKPECVRCGVRETPLWHATDAGNLCNRCLEDERSVGANGNLKSEEDEKNGSAKPSRKSTRVTRYCKPKSNAPLKIIPKGKGRRHIFKKTPIKAPAAVATPVTSDFVFYKGSYFQVGDIVSMKDIDGGIYYAQIRGLLTDQYCEKSAAVTWLLPTTASPPPADGFSPETYMIGPEEDLPRKLESMEFVMHAPSDYYKLKNSPYPPPLTETGTGYIWTSLRHEVSASKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00460167;
- 90% Identity
- iTF_01199074; iTF_00255492; iTF_00292612; iTF_01395524; iTF_00252486; iTF_00253990; iTF_01199814; iTF_01131239; iTF_00293387; iTF_01474349; iTF_01475121; iTF_00253235; iTF_01473588; iTF_00298742; iTF_00297976; iTF_00770777; iTF_00291963; iTF_00294140; iTF_00296444; iTF_01475870; iTF_00254752; iTF_00294912; iTF_00295680;
- 80% Identity
- iTF_00295680;