Crja007018.1
Basic Information
- Insect
- Cephus rjabovi
- Gene Symbol
- -
- Assembly
- GCA_030264185.1
- Location
- JASCRG010000463.1:3762260-3767787[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.00016 0.013 16.2 2.3 2 23 764 786 763 786 0.94 2 9 0.017 1.4 9.8 0.4 3 23 816 836 814 836 0.93 3 9 0.0021 0.17 12.7 1.8 3 21 932 950 931 951 0.96 4 9 1.3 1e+02 4.0 1.2 2 23 968 989 967 989 0.95 5 9 0.12 9.4 7.2 0.7 1 19 1076 1094 1076 1097 0.94 6 9 0.0027 0.22 12.4 3.3 2 23 1116 1138 1115 1138 0.91 7 9 0.013 1.1 10.2 2.4 3 23 1156 1176 1155 1176 0.98 8 9 0.031 2.5 9.0 2.3 3 21 1184 1202 1183 1203 0.94 9 9 0.0008 0.065 14.0 0.2 1 23 1425 1447 1425 1447 0.98
Sequence Information
- Coding Sequence
- ATGGAGGAGTTAGACATCCAAAGCAAGCAATCTGAAGAAATCACTAATACATCAGATATACCTGACGATTTAAGTCATAAATCAATGGCAGTAATGGAGAATAAAAGCATTAGAGCTACCACAGACACTGAAAGAGAGGCAAATAATTTAGAACAGGACACATGCCATTGGAGAGATATGTTGAAATTATGTACACCACTATCGATACGACTTACACATTTATCAAATgacattttgaagaaatttacAGTGCCTAAGAAGAATGTTACACAGAAGCTATCAGGTAGcataaaaaatttagtaatGGATTCTAGGGATTACCGTTctagaaaacgaaaaaaaaagaatttcagtgcaaaatttaaatatgcaaagaaaaagcaaaagacaATACTTGATAAAACCTCACATCTCAGTGAAAGTGATGAAAGTTGCATACTGAAATCTTGTACTCTTACTTCAACAAATGACAATGCATCTGCCGCTCCAGCTTGTGCATCTGAGGAACATATAAGATctgagaaaattataaatgaatctGCAATGGACAAAGTATTAGATGGGCCTATCTCTATGGAACACACAGGTAAAGATGATACACCCTCGGTCCAATGTCTAAATGAGAACACACAAGAGCGTACccaagttgaaaaaaataatacggaAACAGAAGAATCGCGATACCAGGATTATGTGCGTAACATATTAATGGAATATTGCTACTCTTATGGGAACTTGTCTCATAtgtcaaaagaaattaatgataacgaAAATAGTAGTGATACGAAGAGTACTACTGGAGATAGACGACATAGTAACGAGAATTGTGATGACCAGATTCCCTCATggaattcaagaaaaagaagaaaaaacgtaCAATTAAATTCAAAGGACGAAACGATTGTTAGCAGAAAATCGCCAAAGAAGAAACGACAGCaaagaaatcagaaaaatcTCACATTGACACCAACAAAAGATGATAGTAGACGGCCAGTTTTTATGCAACGAACTAAATCTCCGAGTAGTACTTCGCCAGCAGCTGATCAAGAGATAGGGAAAACTGGCACAGACTCCccaaaagaattaaaaattcagtTAATGAAGCTAGAAGACGTATCCGGCGTGTATACTCCAATAGAATCTACGGATATGATTCTAGAAAATGAAAGGGATATCTTCTCATCAATGAATAATGACAATGACTCTGTAGTTGGTTCAGAAGGAATCAGCGATGCAGAGACAATAGTGGATTCAGTGTTCACAGAGGAAAGCAGAAATGACATTGAGACTCAAGAATCTGATCACACCTTGGATACAAGTTCAATAATAGCACTAGAAAAGAAATCAGGTTTTGGTtctgaaatttcgaaaatttctatCGAAAGGGATttagaaattgttgaaaagCAGCGAAAAACATCTGTGTCCTCAGGTGAAACAGTTTGCTTGGATAGTGAATCGGATGATTATATCAATGAGGTAGACGAAGCAATTGATATAGACGGTATTTTAAGACTGAGATATGGCATTAGGAAGAATCCAGTTGtacttttagaaaaattgaatccTATACATAATTATGTGTCGACGAATGTTTACCAAGACGATCATGATGTCAGCGACGTTCTTGAACAATCCGACTCCACTAGCAGTGATTCGGAGATCTTTATGTTTGTGAGAAAACGTAAATCGACATCTGTGAGAAGTCGTCGGATATCCTCTTCAAGTGAAGAAGAACACGGATCCTCGATCAAATCTGTGTCTACGCCAGATTCAAGTAAAGATAAGgatgataagaataaaagtcCTGTTTCCAGAACTACAAGCACCAGGGAAGAGACTTCGGAAGTGTTTATTACTAATCAAACTTCAGGTATTTCTAAAGACACGTCTTTGGAGGGAAGCGAACATGTTGCGACTATTACGACActagcaaagaaaaaagtatcccAACCGGAAAACACGAACAATTTATCTCCTAAAAATATTGTGGAAAATCCTGACATTATAGAATGCCATTCAGATTCTTCGGATTCGGATGTCCAGATATTGTCAGTGacgatgaatttcaatattccatCAGAAACCTGTGAAAATATCGGAATGAATTCCCCCAGCATTGCATTGAGCCCTAAAAAATCACCTTCTAAGTTACGTACCGATAATACTGATAGTGTAGTTACGTCGGATATAAGTGAAACATCAATAGCAGATACACAATCACCAATGAAAAACACACAAACGCCATCGGGCTCGAAAATCACACCTGTTAGTACATCACCAAGGCTCAGCTGTCATATATGCAACCGGAAGTACGTGAGGAAGAGATCACTCAAGATTCACATGGAGTTGCAACATAACAACGATCCCACTAAGAAGTTCTCAAATCCAGACACAACGTCGTGCCCCACACAAGAATGCAGTAATGCGAAAGAGAGCTTGGACTGTGGTATATGttccaaaaaatttgtctCGAAGAAAGCATTCGTCGATCACGTATTTAACCATCAGTCAGAGGAACAGCAGGATTACAGAACAGCACCTGATAAACGTTCACGATCAGTATGGTTGGACCTCTACGGTCTGAAAGATAAGAATGCTGAAGATCAACACGtggaaaaatccaaaaaggaCAAAAAGGATTCATCCAGTGACAAACGGCTTAGAAAGGAAGATCAGATTATATCTAGCTTGACAACTTCTCCGAAAGAAGTTGTTGTATGCCCATGTCATCCTAATAATGGATTGTTAAATGAACAAGATTCTAGTGTTTATATAGAGATGGTGTTACTGTGCGAACATTGTAATGTTGTCTTCCGGAGGAAAGAGTGCCTGGAGACACATTATCGTATTAGCGCGCAGTGTTCCGTAAACAGGACAAGTGGCAGGGTACCAAAACTGTACTGCACTGCGTGCCATGTTACTGTGGAGTCCTTATCTGTTTTGCGTCATCATCTCGAGATGCATCCACGTCTTCAGATCCGTGGCATAGTAACCTTCCTATGTAACATATGCAAAGTGATCTTCTTCGGTATTGGAAGTATATTTCGCAGACACTGGTTCAGTCATATAAAGAATCCTCTCTTCGTGGCTAGTCGTCATTCGTTCCCTAAGATATCTGTTATGAAAGCACTTGAAAATTACAACGTATCTGCAGAGGAAAGAATGCAGGTGGCTCAGGCTGCTAAACTGGCTGAAAACATTCAATACGTTCTCATCGCTGAGCACGTCTGTCGTCATTGTAAATTACCCTTTGGCTCTGAGGCTGATCTTACAAATCATTCAACATCCTGCTCtagcattaataatatatctaatGTCACTAATGCATTAAATGATGGCACGACATGTTCAACTTGTCAGAAAACTTTTACTGATAAGAGCAATTATGACATTCATGTTGGCAAGTGCCATGCGATGGCCGATGGCTCCTCTTCTGCAAAATCAAACGACACGACTTCAGATTGTAAGATTTGCCATATGATCTGTGAAACGGAAGATCAATTGACGCTCCATCAGAATATTCACAGCAGTGCTAATCTGTTATTGTGCTGTCGATGTGGCCTCTCTTTCAGTTCAGCGGAGCACTTTACTACCCATACAAAAGCCACATGCACAATATGTGACAAGCAATTCGACTGCCAAAAACGGTGTCAGGATCATCTGTCAAGTCATTTTACGAATCTTGCAATTAGTGAAAGGCCTCAAGAATCTTCAACAAAAACAGGGACCTCGTGTGAAACAAACTTGGAAGTAGATAAAAGCACCGCGAGAAGGAATCATGTAGAAAATACGGAGGTGACTGTGAGCTCAGGCAGTTCGTCTCTTCAAGCAAGACGATCTGACGCACCGCATCAATCAAAATCGCAAAGCGAAGTTAGATATCTGATAATCAGAGACGAAGTCACAAAGTTACCCAAGCAAGTAGTAACTATCACTTCCGCAGGCAACACTACGAATACGTCATGTATATCTGAAGAAGCTGAGCAGCAAACACGTATTCTCAAAGAAATTCTATCTATTACTAACGCCCCGAAGAAAGTCACGAATATCGTCGAAGCTCAACCAACTAATATAGAAAAGAATCCCTTGGCTTcgggtgaagaaaaaaacacagcTACAACTACGGATACGGAAGTACTAACGGATAGTTCAGAAACAAGTTCTACTAGTGGGATGCCATCTAGCTCAAAGAATGAAAAGACACCTAAACCAGGATTCTTACGCGTGAAAAGTATGTCAGAACTTTTGGAGAAGCGCGATAAGAAAGCTTACATATGTGAAACGTGTGGATTACCATGTACGTCTGCTGAGAATTTGGCAGAACATTCAAACACGCATGTCATTCACCAAGTGGCTAAAGAGAAGACACTACCGTCGGTCAATAATGTCCAGCGTATCGTTGACCAGGATAGTTTAACATTACTCAATCAGTATATAACTTCAAAGAAATTAACTTTACAGCCAATAGTAAGCAATATTACTAACGCCAGTCCTAACAACGTTAATACCGAAATTACCACTAACGTCAATAATACACAACAAGCTAATAACGAAGGTAATTGTGGCAATGCCGCTGCTTTTACTCCGTGTGTGATATGCGGTACAATGTTCAATGCCACAGAGAATCCTATTCATTGTCAGCCGGCAACAACAAGTACAGGACAAGCTAATATGCATACCAACGCCGAAGGTTATCAGCCctttgcaaataataaaacacaaagGATTGAAAATGCATCTACATTGAATACAGCCGTACGTCATTCTCCATTCGTAACGTATACTTCAAATGCAATTAGAAGAGAACCACCTGTCAGTGCTGTTAACAGTGTCAacgtaaatttgaatatgaatCAACAAGTGGCACAACCCTCTTCAAATTCACAATGGACTAACTTAACTTACGATACTACAAATGTTCCTATTGTGCAAAGTCAAATCCCATCACGTCTTCCACCCCCTTATTCAGCTCCGACTAATATTCATTCCAATACCCTTCCAAAGAATACGAACGGCACCACTACTTCTAGCATTAACTCTCACTGCATTGTTCCGCATCCTCCAATGCGTCCTCAGTATCCTTACAGAGCAATCAGTCAATCAGGCAACAAATCTGTTGCTGCGAAACCCTCCAATTCCTCCAGTTCGTCTTCAGCTTCGTCCACTAATAACAATATGCAGCCAGTCACTACTGATGCGCCAATTGGGAGTACAAGACCTTCAGGATATTCAATGAACTACGACATTCTGAATGTCCCGTTACAACAGTCACAATCAGATATAGTTTTACGAACAGAATCTCATGTGACACGAAAACCTGCTCATCAATCGATATCTCATACTATACATCACCTGCCTGAGCAGCCAAACTTCGCAGCAAACAACCAGAGAACAACCATGCAAGGATTTATCCAGCGGATTAATCTTCACTTGTCCCTCCTGTAA
- Protein Sequence
- MEELDIQSKQSEEITNTSDIPDDLSHKSMAVMENKSIRATTDTEREANNLEQDTCHWRDMLKLCTPLSIRLTHLSNDILKKFTVPKKNVTQKLSGSIKNLVMDSRDYRSRKRKKKNFSAKFKYAKKKQKTILDKTSHLSESDESCILKSCTLTSTNDNASAAPACASEEHIRSEKIINESAMDKVLDGPISMEHTGKDDTPSVQCLNENTQERTQVEKNNTETEESRYQDYVRNILMEYCYSYGNLSHMSKEINDNENSSDTKSTTGDRRHSNENCDDQIPSWNSRKRRKNVQLNSKDETIVSRKSPKKKRQQRNQKNLTLTPTKDDSRRPVFMQRTKSPSSTSPAADQEIGKTGTDSPKELKIQLMKLEDVSGVYTPIESTDMILENERDIFSSMNNDNDSVVGSEGISDAETIVDSVFTEESRNDIETQESDHTLDTSSIIALEKKSGFGSEISKISIERDLEIVEKQRKTSVSSGETVCLDSESDDYINEVDEAIDIDGILRLRYGIRKNPVVLLEKLNPIHNYVSTNVYQDDHDVSDVLEQSDSTSSDSEIFMFVRKRKSTSVRSRRISSSSEEEHGSSIKSVSTPDSSKDKDDKNKSPVSRTTSTREETSEVFITNQTSGISKDTSLEGSEHVATITTLAKKKVSQPENTNNLSPKNIVENPDIIECHSDSSDSDVQILSVTMNFNIPSETCENIGMNSPSIALSPKKSPSKLRTDNTDSVVTSDISETSIADTQSPMKNTQTPSGSKITPVSTSPRLSCHICNRKYVRKRSLKIHMELQHNNDPTKKFSNPDTTSCPTQECSNAKESLDCGICSKKFVSKKAFVDHVFNHQSEEQQDYRTAPDKRSRSVWLDLYGLKDKNAEDQHVEKSKKDKKDSSSDKRLRKEDQIISSLTTSPKEVVVCPCHPNNGLLNEQDSSVYIEMVLLCEHCNVVFRRKECLETHYRISAQCSVNRTSGRVPKLYCTACHVTVESLSVLRHHLEMHPRLQIRGIVTFLCNICKVIFFGIGSIFRRHWFSHIKNPLFVASRHSFPKISVMKALENYNVSAEERMQVAQAAKLAENIQYVLIAEHVCRHCKLPFGSEADLTNHSTSCSSINNISNVTNALNDGTTCSTCQKTFTDKSNYDIHVGKCHAMADGSSSAKSNDTTSDCKICHMICETEDQLTLHQNIHSSANLLLCCRCGLSFSSAEHFTTHTKATCTICDKQFDCQKRCQDHLSSHFTNLAISERPQESSTKTGTSCETNLEVDKSTARRNHVENTEVTVSSGSSSLQARRSDAPHQSKSQSEVRYLIIRDEVTKLPKQVVTITSAGNTTNTSCISEEAEQQTRILKEILSITNAPKKVTNIVEAQPTNIEKNPLASGEEKNTATTTDTEVLTDSSETSSTSGMPSSSKNEKTPKPGFLRVKSMSELLEKRDKKAYICETCGLPCTSAENLAEHSNTHVIHQVAKEKTLPSVNNVQRIVDQDSLTLLNQYITSKKLTLQPIVSNITNASPNNVNTEITTNVNNTQQANNEGNCGNAAAFTPCVICGTMFNATENPIHCQPATTSTGQANMHTNAEGYQPFANNKTQRIENASTLNTAVRHSPFVTYTSNAIRREPPVSAVNSVNVNLNMNQQVAQPSSNSQWTNLTYDTTNVPIVQSQIPSRLPPPYSAPTNIHSNTLPKNTNGTTTSSINSHCIVPHPPMRPQYPYRAISQSGNKSVAAKPSNSSSSSSASSTNNNMQPVTTDAPIGSTRPSGYSMNYDILNVPLQQSQSDIVLRTESHVTRKPAHQSISHTIHHLPEQPNFAANNQRTTMQGFIQRINLHLSLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00297919;
- 90% Identity
- iTF_00297919;
- 80% Identity
- -