Basic Information

Insect: Cephus rjabovi
Gene Symbol: -
Assembly: GCA_030264185.1
Location: JASCRG010000403.1:1238852-1242243[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1 83 4.3 0.5 1 21 425 444 425 446 0.75

2 16 0.3 24 5.9 2.0 1 23 449 472 449 472 0.95

3 16 2.2 1.8e+02 3.2 0.2 2 11 507 516 506 519 0.90

4 16 3.6e-07 2.9e-05 24.6 1.6 1 23 533 555 533 555 0.98

5 16 0.00074 0.06 14.1 3.3 1 23 563 586 563 586 0.96

6 16 0.0004 0.033 15.0 0.3 1 23 598 621 598 621 0.93

7 16 0.0043 0.35 11.7 2.4 1 23 648 671 648 671 0.95

8 16 0.077 6.3 7.8 3.2 1 23 677 699 677 699 0.96

9 16 0.001 0.083 13.7 2.4 1 23 714 736 714 736 0.96

10 16 1.2 1e+02 4.0 0.6 3 23 744 765 742 765 0.88

11 16 8.2e-06 0.00067 20.3 5.5 1 23 779 801 779 801 0.99

12 16 4.6e-07 3.8e-05 24.2 0.3 1 23 807 829 807 829 0.99

13 16 0.019 1.6 9.7 0.9 1 23 835 857 835 857 0.97

14 16 0.0086 0.7 10.8 4.4 1 23 863 885 863 885 0.98

15 16 3.2e-05 0.0026 18.4 1.9 1 23 891 913 891 913 0.99

16 16 0.00015 0.012 16.3 1.1 1 23 919 942 919 942 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1	83	4.3	0.5	1	21	425	444	425	446	0.75
2	16	0.3	24	5.9	2.0	1	23	449	472	449	472	0.95
3	16	2.2	1.8e+02	3.2	0.2	2	11	507	516	506	519	0.90
4	16	3.6e-07	2.9e-05	24.6	1.6	1	23	533	555	533	555	0.98
5	16	0.00074	0.06	14.1	3.3	1	23	563	586	563	586	0.96
6	16	0.0004	0.033	15.0	0.3	1	23	598	621	598	621	0.93
7	16	0.0043	0.35	11.7	2.4	1	23	648	671	648	671	0.95
8	16	0.077	6.3	7.8	3.2	1	23	677	699	677	699	0.96
9	16	0.001	0.083	13.7	2.4	1	23	714	736	714	736	0.96
10	16	1.2	1e+02	4.0	0.6	3	23	744	765	742	765	0.88
11	16	8.2e-06	0.00067	20.3	5.5	1	23	779	801	779	801	0.99
12	16	4.6e-07	3.8e-05	24.2	0.3	1	23	807	829	807	829	0.99
13	16	0.019	1.6	9.7	0.9	1	23	835	857	835	857	0.97
14	16	0.0086	0.7	10.8	4.4	1	23	863	885	863	885	0.98
15	16	3.2e-05	0.0026	18.4	1.9	1	23	891	913	891	913	0.99
16	16	0.00015	0.012	16.3	1.1	1	23	919	942	919	942	0.95

Sequence Information

Coding Sequence: ATGTTGAAGTTAATTCTACAAACACAAGAGGGACAACAAGTAGAAGTGTCCATACATCCCGAGGACACATTTGcagatttaaaaaagcaaTATGAAGGTCCAGAAAATTCTGTCTTACCAGAATTTTTAAAGCATCTCATTACCAACGGGGATGAAGTTAGCGAAGACACCAAAATACTTGATCATGTCACTAATAGTACAACACTTGAATGGGCAATGGAAGACTCTATGGAAGACATGGATGATTTAGATTCAATAGATCCTTTACAAAATATCATGGTCGAAGCTCAGATAAAAGAATGCTGTGCAAATGAATGCTTCAATACTGAGTTAACGGCACCAAATAAAACATACTTTCCATTACCTACTGATGAAACTAGACTATCATCATGGCTAATAGGAATTGCTAGACCTGACCTACTCAACCCTGCTGCACAATATAATTCTAGTTTACATCAAAAGTACTTTGTGTGCAGTGATCACTTTCAACACcatcattttttaaagggTACAAATCAAGTTTTGAAACGTCGTGCTTGTCCATCCATAACTCCAGGATGTAATACTGAGGCAGTGCTTAATTCATCCCTTCTGAAACCTCAACCAATGTATGTCAAGACAGAAGTTAAAGATTGTATATTGTTGCCAGCTGAAGAAAACGAAACACTTAATGATTCAGAATCCAACAGCAACATGGTACAAACCACCAATGTTCTTACAGAACCAGAACATCCTGGCATACTTTGTCGTTTGTGTGGTCAGACAACAGAAGATCCCATTTATTTCTATGCAGAAGAGGATAAACAAACTGAATATAGTATAGaggataaaattaatttatgtctTCCCATAACAGTAAATGCCAAAGATCCACTTCCAAAACAATTATGTCACCAGTGCTATGAAAAACTGAATACTTGTCACGACCTGGCTCTGACTTGCTTAGAAACCGAAGATATCTTGAAAAGTATGTTACAAACGAAACAGTTTCATGTAGATGAGACAAAGCATTGTCCTCTATGCATACAAGGAGAAATgcagataattaaaaaaagtgggATCTATCGAAAGGATAAGTTTGAGAAAAATCCGAACATCCTGAGTATCCCTAATACAAAAGTGCAACAAGTAGTGCCTTCACAAAATTGTGTTATAGAAGAAAACGAAGTTGATGTTACTGAAGAAATGGAAAACGACGAGTCAGAATCGTTAGTTGAACATTTTGAAGACGAAGACATTTCTACGAGTCCTTTATCAGTACCAGATACAGAATTTTCCTGttcaatttgcaataaaacgataaatttcTACAATGTCATATATCACGCTGAGCAACATTCCGGTCACCAGTGTGTAATTTGCAAAAACGTTAAATTCAAAACTGCAAATGAGCTCCgggtacattttttaaaacatggGCATTCACGCTTTGAGTGTGAATATTGTGCCATATCTGAGGACGTAATTGAAATGGCAGTAGAACATGTTAAATCATGTAAACCAGAACCATGGGATATTCAGTGCGATCGCTGCGGTGAAAAATTTACAGAAGATGAGGAGACACATACTTGCTCTGTCCCAGAGAACGACGActgGTTCGAATGCGAGCAGTGTGAAAAAAAGTTCAggcgaaaatcaaatttggcAATGCACATAAAGTCTcacgagaaaaaggaaacaatGATGTACAAGTGTGTCTTTtgcaataaacaattttcacgcAAAGGACGTTTGCATACACATCTCTCAATTGTACATCAGGATATCGACGCCATTGTGAGATTCAAGTGTTATAAgtgtaaaaaatgtaacgaGGCGTTCAGCAGCTCAGCCAATGCAGATGCTCATATAACGGAGAAACATTTTAGCCAGCTGATACTTTCTgatgtaaattatataaacgATCAATTTACAGTAGAGGAAttgaatttgacaaaattgtatatatgcgAGTATTGTGAGAGATGTTTTACAATACCGATCTCGTTACACGAGCATCGACAAAATGAGCACTCACAAAATTCTGATTATCACTGCAACGTGTGTAATAATTCCTACGAATCATATAAACAACTTCTAAGTCACAAAAGTCTCCATAGCAAAAGTAATGAATTTGAAGATCTGGGTATCCGGCAGTATTACGTATGCAAATATTGTAACAAGACGTTTCTGCACTATGCATCCCTAAATGCGCATACAATTCAACACAGACAGCCGACACCTTATTTATGCCGACCATGTAACTTAAAATTTGCTACGTATAAGGAGATGGAAACACATCGTCAAGCAACGCATCCTTATCAATCAATTCTACATGAGGGACCAAACGGCTCTTATCAGTGTCACtattgcaaaaagaaatttagtCATGAACTTGCATTAATCAAGCATATACGAATGCACACTGGCGAACGTCCATATAAGTGTGCAGTGTGTGGCAAAGCATTTTCACAATCGTCAGGACTTTATACTCATCTTAAAGTTCATTCAAATTTGAGACCTTACATGTGTTCTCAATGTCCACAGACATTTAAGATCAAGGGTGACAGAGATAATCATGTAAAAAAGCATTCTGGTAATCGACCATACAAGTGTGATTTTTGCCAGAAGGCATTCATGACACAGCATGTTTACAGTCAGCATAGGAAGATTCATACGAATGAAAGGCCATATAAATGTGACACATGTGGTGATGCTTTCAGAAGATCACATGTGTTAACTGTGCATATGAGACGGCATACTGGAGAAAAGCCACATGCTTGTGATTTGTGTCCTAAAGCATACAGACAGCGAGGTGATTTGTTAAAGCATAAGAAAATGCAACATGGTACTAGCTTGAGTAGTgttttaaattctaatattacaaataactcAAACAGTACTTTAAAAAAGGCACAAAGTACATTATTGACTACTGATGCGACTACTGTACTTTTACCAATTTGA
Protein Sequence: MLKLILQTQEGQQVEVSIHPEDTFADLKKQYEGPENSVLPEFLKHLITNGDEVSEDTKILDHVTNSTTLEWAMEDSMEDMDDLDSIDPLQNIMVEAQIKECCANECFNTELTAPNKTYFPLPTDETRLSSWLIGIARPDLLNPAAQYNSSLHQKYFVCSDHFQHHHFLKGTNQVLKRRACPSITPGCNTEAVLNSSLLKPQPMYVKTEVKDCILLPAEENETLNDSESNSNMVQTTNVLTEPEHPGILCRLCGQTTEDPIYFYAEEDKQTEYSIEDKINLCLPITVNAKDPLPKQLCHQCYEKLNTCHDLALTCLETEDILKSMLQTKQFHVDETKHCPLCIQGEMQIIKKSGIYRKDKFEKNPNILSIPNTKVQQVVPSQNCVIEENEVDVTEEMENDESESLVEHFEDEDISTSPLSVPDTEFSCSICNKTINFYNVIYHAEQHSGHQCVICKNVKFKTANELRVHFLKHGHSRFECEYCAISEDVIEMAVEHVKSCKPEPWDIQCDRCGEKFTEDEETHTCSVPENDDWFECEQCEKKFRRKSNLAMHIKSHEKKETMMYKCVFCNKQFSRKGRLHTHLSIVHQDIDAIVRFKCYKCKKCNEAFSSSANADAHITEKHFSQLILSDVNYINDQFTVEELNLTKLYICEYCERCFTIPISLHEHRQNEHSQNSDYHCNVCNNSYESYKQLLSHKSLHSKSNEFEDLGIRQYYVCKYCNKTFLHYASLNAHTIQHRQPTPYLCRPCNLKFATYKEMETHRQATHPYQSILHEGPNGSYQCHYCKKKFSHELALIKHIRMHTGERPYKCAVCGKAFSQSSGLYTHLKVHSNLRPYMCSQCPQTFKIKGDRDNHVKKHSGNRPYKCDFCQKAFMTQHVYSQHRKIHTNERPYKCDTCGDAFRRSHVLTVHMRRHTGEKPHACDLCPKAYRQRGDLLKHKKMQHGTSLSSVLNSNITNNSNSTLKKAQSTLLTTDATTVLLPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00295494;
90% Identity: iTF_00293176;
80% Identity: -