Basic Information

Insect: Cephus rjabovi
Gene Symbol: ham
Assembly: GCA_030264185.1
Location: JASCRG010000178.1:319947-343630[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.71 58 4.7 0.3 2 23 306 328 305 328 0.77

2 9 8 6.6e+02 1.4 0.1 3 23 337 358 335 358 0.89

3 9 2.8e-09 2.3e-07 31.2 0.2 1 23 364 387 364 387 0.98

4 9 6e-06 0.00049 20.7 2.6 1 23 393 415 393 415 0.95

5 9 1.2e-05 0.00096 19.8 4.4 1 23 421 443 421 443 0.99

6 9 0.022 1.8 9.5 0.5 2 21 451 470 450 471 0.94

7 9 8.5e-09 7e-07 29.7 1.2 1 23 807 829 807 829 0.99

8 9 4.5e-07 3.7e-05 24.3 1.7 1 23 835 858 835 858 0.97

9 9 1.3e-05 0.001 19.7 3.4 1 23 864 886 864 886 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.71	58	4.7	0.3	2	23	306	328	305	328	0.77
2	9	8	6.6e+02	1.4	0.1	3	23	337	358	335	358	0.89
3	9	2.8e-09	2.3e-07	31.2	0.2	1	23	364	387	364	387	0.98
4	9	6e-06	0.00049	20.7	2.6	1	23	393	415	393	415	0.95
5	9	1.2e-05	0.00096	19.8	4.4	1	23	421	443	421	443	0.99
6	9	0.022	1.8	9.5	0.5	2	21	451	470	450	471	0.94
7	9	8.5e-09	7e-07	29.7	1.2	1	23	807	829	807	829	0.99
8	9	4.5e-07	3.7e-05	24.3	1.7	1	23	835	858	835	858	0.97
9	9	1.3e-05	0.001	19.7	3.4	1	23	864	886	864	886	0.99

Sequence Information

Coding Sequence: ATGAACGGTTTAGATCTGTCGCGATCAATGGTCGATTACAAGATGAGCGgaagcAGCGACGAGGGCGAGGCGGCCGGGGGTGCCGGGGGTGGTTGTCCACCCGAGGGGGGAGAGATGGACGAAAATTCGACAAGGGGCTGCAGCGACAATCCCATTTACAGGGACTTGAAACCCTTGCACGCGACAAGTGCTCACGACGTTCCGCAGGAATATCCGCAGGCCAGGCCAGCCTATCAGAGGCGAGAATATTCGCCGGCGATGGAAAGGACGGCGACCATCAAGAAGGAGGAGCCGGCAACCCCCACGGAGGAGGACAGGAAACCGTGGGATTTCAGTGAGAAATTGGAGCGGAAGATTTTCGGTCAGTCAGCTGATATCTATAGGGGTGAATATCAGAAAACGATAAAACAGGAACCCAGGGACTCGAAGGAACAATTGAGCAGAGATTGGGTGTCGCCGGTACCGGAAGTCGAGGTCAGCGGTTCTGCGCCGGGAGGTCCTCAAGTGCGGGCACGAAAGGATATTCCACGCGGAGCACGATTTGGACCGTTTTTAGGAAAATGGGCTGACGAACCGTTCAACCCCCGTTACGCGTGGGAGGTATGCGCCGGAAATGGCGTTAGGGGTTGGTTGGACGCATCGCATGAACTGACAAATTGGCTCAAGTACGTTCGCAGCACCGCCAGTCCACATGCTGTTAATATGCGACACGTTCTCATTGGCGGACAGATGGTCTACGAAGCGATACGCGACATCGCCAGCAGTGAGGAATTGCTTTTAGGTTTGAGGGAACCTCTTCAGCTTAAGGATATGCTCGGTGAAAACACGACGGAGGATAGAAACGACAGAGAAACAGCTTCCCAGCACAGTGGCATCGTAGACGAGGATcgcgaggaggaggaagagggtgAAATCAGGTGTACCGTCTGTGACAAACCCTTCCTGGACATAGAGCTACTCGACGGTCATCTGGTGACGTGTCATCGATATCCGGCCGAGCAGCATCTTTGCGAGAGCTGCCCGAGGGGATACGCCTGGCGGCCATTGCTTGTACGTCATCGGGCGATAGTTCACGGGGATCTGCGAAAGTATCCGTGCGAGAATTGTCCGAAGGTCTTCACGGACCCGTCGAATCTTCAGCGACACATAAGGACGAACCACGTGGGGGCCAGGAGTCACGCCTGCACCGAGTGCGGCAAGACGTTCGCTACCAGTTCCGGTTTGAAGCAGCACACGCATATACACAGCAGCGTCAAGCCGTTTCAGTGCGAAGTATGCTCTAAGGCGTATACGCAATTCTCGAATCTATGCAGGCACAAGCGCATGCACGCGACCTGCCGTCTGCAGATTGAGTGCGTCAAATGTCGGCAGTCCTTTAACACCGTAACTTCGTTGGCGAAGCACAAAAGATTCTGCGACTCGACCGCACCCACCGGACCACCCGGTACCATGACCCAGCTGCCGAGCTCTGCGCCAAATCCGTTTCTGGTCTATCCGCGACCACCGGTCACGCTACCAGGCGCACTTCCGTTTTATCCGCCGAGTCTCATGGGTCCCTATCCCGGGATCTTCTCGAACGCACCGAATTTCCTGAACTCGTCGCTGCTGTTTCCGCCCAAGGTCGAGCAGGCTGACAAGAGATACGACAGTCCCAAGAAGGAACGGTTCACGCCGCCCAGGATACTGCCGCAGCATAGCAAGGTGTCGCCCAGCACGGGGGAGGAAGCCACGTCGAACTTCCGGCCGTCGCCGGCCAGACCGCCGGTACAACCCACGCCGGAGAGCGACGAGGATCCCGTGAAGAGGAAGGAGACGAGTAAGCCGATGGACAAGAGGATGGAGACGGAAGCGTCGGAGGAGTCGACGGATCAGCCTCTGGATCTGAGGGTGCAAACGAAACGGAGGGATCAGCCGGACGGCGTGTCGGAGAGCGCGGCGTCTTCGCCGGCCCCGGTGGTCGAGGAAGCGCCGCCACTTCCGGAACGAGCAAAACCGGAAGAGGAGGAGATGGAGGTGGAGGTGAAGGAGGTGGTCCCCAGCTCACCCGTAAGAAGCGTGGCTGATCATCAGCCTACGAACACTCCACCTCACATGGCCTATCCACGACCTATACACCCCATGTTCCTAGAAGCAATGTACCGATCGCCCGCCGGAAGCTTCCCGGGTTTCCACGGTGGTCCGCCACCTCCTGGCGGGGGTCCGGAGTCTCGTCTTCTGCCGCCGTTACCACCCTTCGGACCGCCACGTGGACTTCCTTTTTTAGGGACGCTCATGAACGGGCTGAGCGGCACTAGACCAGGCTTCGACCTCCTGGCCAGGCCGCCGCTCAGCGCGTTCCCTGGGGTCAAGCCCTTCCAGGACGTCATCtcccatcatcatcatcatcaccatcacgCGCACGGGAAGATGAAGGACCGCTACTCGTGCAAATTCTGCGGCAAGGTCTTTCCACGTTCGGCCAACCTGACACGCCACCTCAGGACGCACACCGGCGAGCAACCTTACAAGTGCAAGTACTGCGAGAGGTCCTTCAGCATCTCCTCCAACCTTCAGCGTCACGTCAGGAACATCCACGACAAGCAGCGTCCCTTCAAGTGTCCCCTGTGCGAGCGCTGCTTCGGCCAGCAGACGAATCTCGACCGTCACCTCAAGAAGCACGAGGCCGACGACGGAAGTGGCGTCGTTTCCGTAGCCGATTCACCGGATAGCAGTAACGAGAACGAGCGCGAGGATACCTACTTCGATGAGATCAGGTCCTTCATGGGGAAGGTCGCCTACGGTGGTGAAGGTTGTGGGTTACCGCATCCTGCCTACCTGCCGGGTAGACTTCACGATCTTCACGAGGCCAAGACGGTCGGCGAAtacgacgaggatgaggatagCGAGGAGGGTGTCTCCCCCATAGAGGAAACCGACGGTATGTGTCCAATGGAGAACAAGGAATCCCCACCACCTCAGTACGAGCTCAAACTGAGGGACAAGCAGGAGTTGCTCAACAATAACACGGCCGAGCCCGTTATAGAGATTTCCACATAG
Protein Sequence: MNGLDLSRSMVDYKMSGSSDEGEAAGGAGGGCPPEGGEMDENSTRGCSDNPIYRDLKPLHATSAHDVPQEYPQARPAYQRREYSPAMERTATIKKEEPATPTEEDRKPWDFSEKLERKIFGQSADIYRGEYQKTIKQEPRDSKEQLSRDWVSPVPEVEVSGSAPGGPQVRARKDIPRGARFGPFLGKWADEPFNPRYAWEVCAGNGVRGWLDASHELTNWLKYVRSTASPHAVNMRHVLIGGQMVYEAIRDIASSEELLLGLREPLQLKDMLGENTTEDRNDRETASQHSGIVDEDREEEEEGEIRCTVCDKPFLDIELLDGHLVTCHRYPAEQHLCESCPRGYAWRPLLVRHRAIVHGDLRKYPCENCPKVFTDPSNLQRHIRTNHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCSKAYTQFSNLCRHKRMHATCRLQIECVKCRQSFNTVTSLAKHKRFCDSTAPTGPPGTMTQLPSSAPNPFLVYPRPPVTLPGALPFYPPSLMGPYPGIFSNAPNFLNSSLLFPPKVEQADKRYDSPKKERFTPPRILPQHSKVSPSTGEEATSNFRPSPARPPVQPTPESDEDPVKRKETSKPMDKRMETEASEESTDQPLDLRVQTKRRDQPDGVSESAASSPAPVVEEAPPLPERAKPEEEEMEVEVKEVVPSSPVRSVADHQPTNTPPHMAYPRPIHPMFLEAMYRSPAGSFPGFHGGPPPPGGGPESRLLPPLPPFGPPRGLPFLGTLMNGLSGTRPGFDLLARPPLSAFPGVKPFQDVISHHHHHHHHAHGKMKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCPLCERCFGQQTNLDRHLKKHEADDGSGVVSVADSPDSSNENEREDTYFDEIRSFMGKVAYGGEGCGLPHPAYLPGRLHDLHEAKTVGEYDEDEDSEEGVSPIEETDGMCPMENKESPPPQYELKLRDKQELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01473381;
90% Identity: iTF_01473381;
80% Identity: -