Crja010882.1
Basic Information
- Insect
- Cephus rjabovi
- Gene Symbol
- -
- Assembly
- GCA_030264185.1
- Location
- JASCRG010000679.1:311029-318810[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 8.3e-06 0.00067 20.3 1.0 1 23 179 201 179 201 0.98 2 31 0.0036 0.29 12.0 1.9 1 23 224 247 224 247 0.96 3 31 0.0003 0.025 15.4 1.0 2 23 254 276 253 276 0.96 4 31 0.00039 0.032 15.0 0.5 1 21 296 316 296 317 0.95 5 31 0.0052 0.43 11.5 0.6 2 23 414 435 413 435 0.95 6 31 0.0087 0.71 10.8 0.3 1 23 441 464 441 464 0.92 7 31 0.00016 0.013 16.3 0.1 1 23 537 560 537 560 0.96 8 31 0.013 1.1 10.2 0.7 1 23 566 589 566 589 0.96 9 31 0.16 13 6.8 1.5 1 23 602 624 602 624 0.97 10 31 3.3e-05 0.0027 18.4 0.6 3 23 669 690 667 690 0.96 11 31 0.011 0.87 10.5 0.8 2 23 753 776 752 776 0.94 12 31 4.1 3.4e+02 2.3 0.0 2 23 785 807 785 807 0.84 13 31 0.054 4.4 8.3 0.0 2 23 814 836 813 836 0.95 14 31 1.7e-05 0.0014 19.3 1.2 1 23 844 866 844 866 0.98 15 31 0.052 4.2 8.3 1.4 2 23 897 920 896 920 0.93 16 31 0.00028 0.023 15.5 3.3 1 23 923 946 923 946 0.97 17 31 0.039 3.2 8.7 0.5 2 23 953 975 952 975 0.95 18 31 0.0043 0.35 11.7 5.1 1 21 1002 1022 1002 1023 0.95 19 31 0.0036 0.29 12.0 1.8 2 23 1037 1058 1036 1059 0.93 20 31 0.28 23 6.0 0.9 1 23 1062 1085 1062 1085 0.94 21 31 0.022 1.8 9.5 1.4 2 23 1092 1115 1091 1115 0.91 22 31 1.3 1e+02 3.9 0.2 2 23 1123 1145 1123 1145 0.95 23 31 4.1 3.4e+02 2.3 0.0 2 23 1152 1174 1151 1174 0.87 24 31 0.3 24 5.9 2.7 2 23 1183 1205 1183 1205 0.96 25 31 4 3.3e+02 2.4 2.0 2 23 1211 1233 1211 1233 0.92 26 31 3.5 2.8e+02 2.6 0.0 3 23 1296 1317 1294 1317 0.93 27 31 0.00048 0.039 14.7 1.0 1 21 1343 1363 1343 1364 0.95 28 31 0.65 53 4.9 1.3 2 23 1463 1485 1462 1485 0.93 29 31 0.81 66 4.6 0.4 2 23 1492 1514 1491 1514 0.94 30 31 0.92 75 4.4 2.5 1 23 1525 1547 1525 1547 0.97 31 31 3.7 3e+02 2.5 0.1 3 20 1556 1573 1556 1575 0.94
Sequence Information
- Coding Sequence
- ATGCTTTTGCAGTGTCTTGCAGATGCAACAGCAGTGTTCCGTTTAAACGCAGCCAATGCTCTTGACACAATTTCAGAGAGAATAACTGCATGTGTCAATGCGGTGGCATTATTAGAAAGATGTTTACCCTCCAGTGATGCGAGTAACAATGGAGCGCATACTCATATGGATCAGTATACAGAGCTGCGCTCTGAGCTTCtcaaggagaaagaaaatatgccTATACTCATTCCTGAAGCCCCCATAGTCAATCCCAATGCAGCCCTGGGCACTCCACCAAGACTGAATTCTGATGGTGAAGCGGATCATGAGATTGAAGAAATACTTGATCAGAGTGGCACCGATGAAGgtCAAGACGAGCACGAGGATCCTAAATCGGACGATTATGAAATGGATATGGAAACTAATCCAAGTGATTTCCTGGAGATGACGTCCATGGTCACTGACGACGTCGAGGAGATACGATCTCTCTCCATGCCACGTGAGAAACAAGACACCAGTGTTTTCCAGCACACGTCGGAACAGCACGAGGTCTACGTGTGCTCTTTGTGCAACAAGGCCTTCAGCTCGAAAGGGCATCTCTCTTTGCATGCCAGAATCCACGTGGGTGCTGGTGATGTAATCGGCGAGAAAGTCATCACCGACGATCACACCTCCTACAAGAGACCTTATCAATGCGACCTCTGCAATAAGTCGTACTCGACGGCAAAGCACAGATGGGGACACGTCTCAACGACACATAGGGGTCATCCAGCGGTTACGTGTAGATACTGTTCTCGGATTTACTCGACGAGAACGAACCTGGAGGAACACATAAAGTCTCGTCATGCGGGCTTACCACCACCTCCGGAACTACCACTTCCTTATATTCAACCTGACAACAGGTTCCAGTGTAAGACGTGCCCAAAGATGTACACGAACGTCACCGATCTGAATAAGCACAGTCGTGTCTGTCTGGGCGAAAGACGTAGGGAACTGCCCAACAAGATTTCCGTTCAGAAGAGCAAAAGTCTTATAGACACGTCGGATCTATCTAGTATGGACTCCGACGACGAGAGTAAGGACTATCGGGATGCCGAAGCGAAACTCGCCAAGAATCCCCAGCTGACTATACTTAAGCAGGCACTGACCAAGGGCGATAGCCTTAAGCGGGATTACGAGGACAAAAATAGAATTGGCTCGAAACCTAAGAAAGTCGCGAGGACAGaCAGCAGTGAAACCGATGCCCAGAAGAGGTGGTACTGTGAAACCTGTCCACAGAATTTCACGTCGGTGGAGCATTTAAAGGAACACGAAGTCACTCACGAGGCGGACAAACCCTACATCTGCATCCTCTGCGAAAAGGATTTCGTCCTTAAGTCGTCTCTGAGTAGACACATTTTGACATCTCACGGGGTCGATCCTTCTCCAATCGTTGACAGTGACAAGTGTCTAAAGAAAACAGTGGCTAATCTGCAAATGCGGAATAAGCAGGCGCAGATCATCTACAACGAGTCCAAGTTAACCAAAGAGGCATCTCAATCTCCATTCTCGCCAGAGATGAATATGGATAACGACGAGGAGGATCGTGAGAGCGGCCACGAGAACATGATTGAAATCGAGACTGTGTTTGTCTGTGAAATATGCACTAGGGATTTTAATGATCGTGCATCACTATGGTTACACATCAGAGCGACGCATAAAGAATTCGCGGCGTTTGCTTGTGGAGTCTGCTTAAAGATTTGCTCGGACAATACTCAGCTCTTGAATCACGTTAACATGTACCACGGTGGCTCAAAGCTTCAGGTCTCAGAACAAAGAAGGTATAGTTGTACAATCTGTGGCAGGCAACACGATTCCAGGAAGAAGCTCATCACTCACGTCTCTATTCATAATGTTGATCCTGGTTACGATCCAGCGAGTTTTGTTCAACTgaatagtaattattataacgaGAATCTGAATAGTAACGAAGCCAATGAACAGCCTATTGATTTTGATGGTGAAGATGGAGAGAAGATCGACTGCTATATATGTTACAAGTCTTTTCCTAACGAGGATCATCTCATTAGGCATCAGCGGAACGCTCACAAGtccGAACCCCTAGTGCAGATGGGTGACCCTAGCAATGGCAATGGATCCGGTTCTACTCCAGGCAATGGAAATCGTGCTCAGTATCATTTGTTCTTCGTTTGTGAACTTTGTGGCAGTTCGCATCCAAGTAAATGGGAGCGGTGGCTGCACGTTAGTGGAGTGCACAGTAATGAACCTGCCATAAGGTGTGAGCGCGAGGACTGCGGTAAAATATTTGCTACTAGGTCACTTCGCAACGAGCACGTGCAACATCATCTTCTTCAGGGTGCCTCGCCGAATACCTGCGAGATCTGTGGGAAGCTGTGGGGCAGTCGTGTGGATTACTGGAAGCATGTAATGGGCGTACACTCTGACACGGTACCCTTAATCTGTGGGGTATGTCTAAAAGTCTTCCCCGACGTCATCCAGCTTAGTGCTCACGTCAAGTCGAATCATTGGCCTCTGACCAACGGAGACTTCAGCTGTGATATCTGCGGGAGGCCGTActcaaataaatcaaaaatgtCCCGGCATAGGAAGATACATGGTTTGGATATGGACAGCTACGCCAACAGCACCTTGCACGAGGTTATGAACGATTCTAGGCTTGAGCAGGGTTCCCACGAGAGCGATCTCACCTGCGAGATGTGTTCTGATGTCAAGTTCACTAATCTGGATGACCTGTGCAATCACAGAAGAACAGCGCACGGTCTGTTTCCTTGTGATCTTTGTAATAAGTGCTACGGACGGACCTCGCACCTTTGGAAGCACGTCAATCGTGTTCACAAGGGTCACGAGGACGTCACCTGCAGGTACTGCATGAAAACCAGCGCTTCGAGGGATCATCTTGCTGCTCACATTGCCAAGATACACAGGTATGAGCCGGAGATGAAGAAGGAAATACGGGAGTCGTCCATCTTCAAGTCGCCTAATCCTGAGGACGAGACTCTTCATCATTGTGAAAAGTGTAACAAAGGTTTCCACAAGAGATATCTTCTACGTCGTCACATGAAAGGCTGTCAGAACTACAGAAAGGATCCTGGTGCGTTGCTCACTAGGTGTCGTGCCTGCGAGAGGATATTCAAGGACCGTGCTAGTCTCCAGAAACACATTGAGAATCATCACAGTACCTATACCTGCCATCTCTGCGATGAGACCATAACCTCCAAATTAGGTATCATGACGCATAATAGAGTGAACCACATGAACCATCCAGACCTGACTTGTGACTATACAAGTTGCAAGAAACTGTTCCGTACCAAGGAGGACCTGGAGTCTCATCGCAAAGATCACAAGTACCTTGGTACTCCTAACGTCTGCGACTTTTGCGGTGATACCGTTGAGAATAAGCTTAAGCTCAAGATGCATATACTATCCTTACACCGTAACGAAATCGGAGTATCCTGTGGTGTCTGTCTTATACCCATGAAGGATCCTAAGGAACTCAAGAGACACGTGGAAGACGTCCACAGGAGTATACTATCTAAACCTAATACCTGTCAGGTGTGCGGCAAGCAATACGCCTCCAAGTGGAAGGCTTTTGATCATACGAAAAAGTGTCACGGCAAGGTGTTCAGGACTTGTAAACAGTGTCTCGCAGTGTTCACTAGTGACGAGGATATAAAGCATCACTACGAACACGTTCACAACGTTCCCAAGGATCAGCTTGCTGGTTTTGAGTTCAGGTTGGACGTCGGACCCAAGCAGGAGGAGTTTGACGCCCCCGACATCGTTGTTAAGGAAGAGCCTCAAGAGCTTGATTTCTACGAGGAGCCTTGCGAGGAAGACTATCATAACTCTAAGAGAAGGAGGTCGTTTTCTGATACTCTGGACTGTGAGATGTGTCCTGAGATCTTCCTGAATGACGTCACTCTGGCTGAGCACTATAGAAACGTTCACAATACGGATCCTATGCGTATATTCAAGAAGCTTAAACTGGACACTGCAAAgcggaaaatgaaaaaccgcGAGAACTTTGAATGTAAGAACTGCAGAAAGCAGTTCTCCACGAAGACCCTCTTCTGGAACCATATAAATGTCTGCTCCAAGCGTAATTCTGTAAACAGGGATGACAGGGCGTACTCCACATCCATTCTGGAGTCTCACCTCAAGAATAACAAtcagattaaaaaagaagagccTGAACCTATCCTTAACGAGTCTAATCTGAACATCCCTGACTTCAATCTCTTTGAGGATATTAATATGCAACTCTCTGGACAGAAACCTGTACCTAACCTCATGCCTCTGTCTCATATGAGATCGCTGTCAAGTATAAAGTGCTCGAGAAAGGACTCCAGGAAGGTGTACGATGAGTCGACGAATACCGAGTGTGCCTGTGAAGTCTGTGGAAAACAATGGCCAGCTAAGAAGCACCTCTGGCAGCATCTTATAAGGTTTCACAGAACGGAAGCTGCTGTCACCTGTGGCGTTTGTCTGAAGCTCTGTAAAACTTATCAGGACCTGGCGGATCATCTCAAGGCAGCCCACGAAGCCATCCTTACCTGCGAGGGTAACAATTTCACTTGTAAAACCTGTGGCAGGTATCATAATGCTAGAAGTAAATTACTCTTGCATATGAGCATACACATTAATTGTAATGGTAGCAGCTGGTGTAGAAAATGTCAACAGAGTCTTGAGAGTGAAGATAAACTCAAGGAACACGTCGCTGTCTGTACTGGCGGTAACCAGGTAGAGTACGAGGATCATAGTAATGATCTGGAGAACGCTGCCAAGAACAACGAAAATGATCACGATTATAAGAATATTCTTATGGACGACGAGAATTCCTTGATGGAGGAAGTGGACGAGGTCGAGGAAGTTGAGTTTGAGACTGAAGCTTCTGATAATCGTGAGGATAGTAATTCAGATGACAGTGGTGATTCCGATAGTGATAGTAATCCTAGTAGTAGTGACGACGAGGGTAACGATAATGAGAATGAGGATGAAGCTGAGTGTAGGACTAACAGTAGAGCTACGGAGGTTAGCAGTGATAGTGAGAGTGCAAATCAAGATTCGGACGAGGATAAAGTTAATGTGGCTAAAGATCATCATCTGGAGCAGAGTGAAGACATCAAGTGTAATAACATTGTCAAAGCAGAACCTGAGAATGAGGAGGAATCCCAGTATCTACAGTATAAGGAAGAGTCTCCTGCATTGAAGGTAGACGAATATCCTATGGAGGAAAGGATGGATCATGAGAATCACGAGGTTGTCAAGGTCGAGGCTGACGCTCCGGATTACTCTGACGATGACTTAGACGAGGACGACGATGATGGACCCCCAGTACTAAGTCCAATGATGCCATTACCACCGGTTCAGGATGCAGAACATGATAACAGACATTTGGACGACGAGATACAGCATGAATTAACGCCTATCGTGTctattaaaaagtcaaatgaGACTGAAGGGGTCGACGACGATGATCACCAGGAGTTCAAGGACCAAATAGAAAACGGTAAGTCGACCTCCAGCTCCTCAGAATATTATGAGAAATCCGATCCGCAGAAGGTGAGTTCGAATGTGCCTTCAGTGGTAATGGGAGAATCGCAATCGGATACAGAAGAGGAGGGCGAGGCTGAGGGTGACGAGGAGGAGTACGATAGTCAAATGGAAACTGTGGATCAGACCGATGAAGAGAATAAAAGGTTCATCAGTTACGAGACGCATAACACTGAAGACTCCGTTGAGGGTAGCTTTGCAGAAAATTTCGAAGACGAGACAATGGAGGTCGAGGTTGCTGATGGAGATGGTAGCGTCCAGATACACGACCTCGACGGTACTGTACTGATGGTAGCAAATGATTCGGATGGTAATCAGATTCTGATCCAAAGGAACGTAGTTGACGTGATGGAGAACGACGATTCTAATCCGGAAGTCACTGAGTACGTCTACCAAGATGGGCAGGAGTACGAACTGGAGGAAGGATACGCGGAGTCGCAGCAAGCAGATGACGTTCAGGACGTCTCCGACGAGGTTcaggaggaggaagatgaaatCGGTAACGAGGAATTCGACGAGGAAGTCGTTACGAGGGAGAACGAAGTTGAGGAGGGCGATGATATGGAACCTGAACAAGAGGAGtatgaggaggaggaggaagaggagcaggaagaggaagaggaagaggggCAGGATCAGGAGCAGGAGCAAGAACAGGAACAGGGACAGGATCATGAGCAGGAAGCGGAAGACTGTGAAGAGGAGGTTGttgacgaggacgaggattcCAAAAAACCGATTAATAGTGCCAAAACCGTAGTGTCAAGGACGTAA
- Protein Sequence
- MLLQCLADATAVFRLNAANALDTISERITACVNAVALLERCLPSSDASNNGAHTHMDQYTELRSELLKEKENMPILIPEAPIVNPNAALGTPPRLNSDGEADHEIEEILDQSGTDEGQDEHEDPKSDDYEMDMETNPSDFLEMTSMVTDDVEEIRSLSMPREKQDTSVFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRTNLEEHIKSRHAGLPPPPELPLPYIQPDNRFQCKTCPKMYTNVTDLNKHSRVCLGERRRELPNKISVQKSKSLIDTSDLSSMDSDDESKDYRDAEAKLAKNPQLTILKQALTKGDSLKRDYEDKNRIGSKPKKVARTDSSETDAQKRWYCETCPQNFTSVEHLKEHEVTHEADKPYICILCEKDFVLKSSLSRHILTSHGVDPSPIVDSDKCLKKTVANLQMRNKQAQIIYNESKLTKEASQSPFSPEMNMDNDEEDRESGHENMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNTQLLNHVNMYHGGSKLQVSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPASFVQLNSNYYNENLNSNEANEQPIDFDGEDGEKIDCYICYKSFPNEDHLIRHQRNAHKSEPLVQMGDPSNGNGSGSTPGNGNRAQYHLFFVCELCGSSHPSKWERWLHVSGVHSNEPAIRCEREDCGKIFATRSLRNEHVQHHLLQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSAHVKSNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDMDSYANSTLHEVMNDSRLEQGSHESDLTCEMCSDVKFTNLDDLCNHRRTAHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCMKTSASRDHLAAHIAKIHRYEPEMKKEIRESSIFKSPNPEDETLHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCDETITSKLGIMTHNRVNHMNHPDLTCDYTSCKKLFRTKEDLESHRKDHKYLGTPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKELKRHVEDVHRSILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDIKHHYEHVHNVPKDQLAGFEFRLDVGPKQEEFDAPDIVVKEEPQELDFYEEPCEEDYHNSKRRRSFSDTLDCEMCPEIFLNDVTLAEHYRNVHNTDPMRIFKKLKLDTAKRKMKNRENFECKNCRKQFSTKTLFWNHINVCSKRNSVNRDDRAYSTSILESHLKNNNQIKKEEPEPILNESNLNIPDFNLFEDINMQLSGQKPVPNLMPLSHMRSLSSIKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRTEAAVTCGVCLKLCKTYQDLADHLKAAHEAILTCEGNNFTCKTCGRYHNARSKLLLHMSIHINCNGSSWCRKCQQSLESEDKLKEHVAVCTGGNQVEYEDHSNDLENAAKNNENDHDYKNILMDDENSLMEEVDEVEEVEFETEASDNREDSNSDDSGDSDSDSNPSSSDDEGNDNENEDEAECRTNSRATEVSSDSESANQDSDEDKVNVAKDHHLEQSEDIKCNNIVKAEPENEEESQYLQYKEESPALKVDEYPMEERMDHENHEVVKVEADAPDYSDDDLDEDDDDGPPVLSPMMPLPPVQDAEHDNRHLDDEIQHELTPIVSIKKSNETEGVDDDDHQEFKDQIENGKSTSSSSEYYEKSDPQKVSSNVPSVVMGESQSDTEEEGEAEGDEEEYDSQMETVDQTDEENKRFISYETHNTEDSVEGSFAENFEDETMEVEVADGDGSVQIHDLDGTVLMVANDSDGNQILIQRNVVDVMENDDSNPEVTEYVYQDGQEYELEEGYAESQQADDVQDVSDEVQEEEDEIGNEEFDEEVVTRENEVEEGDDMEPEQEEYEEEEEEEQEEEEEEGQDQEQEQEQEQGQDHEQEAEDCEEEVVDEDEDSKKPINSAKTVVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00295442;
- 90% Identity
- iTF_00297739;
- 80% Identity
- -