Basic Information

Insect: Cephus pygmeus
Gene Symbol: RREB1
Assembly: GCA_036026175.1
Location: JAYRBY010000447.1:615913-621292[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00062 0.059 14.4 0.0 1 23 39 61 39 61 0.98

2 15 0.0002 0.019 15.9 0.3 1 23 75 97 75 97 0.98

3 15 2.6e-07 2.5e-05 25.0 1.3 1 23 103 126 103 126 0.98

4 15 0.12 11 7.2 0.2 1 23 219 243 219 243 0.92

5 15 0.28 26 6.0 5.3 2 23 249 271 249 271 0.95

6 15 1.1 1e+02 4.2 0.3 1 19 327 345 327 347 0.94

7 15 0.22 21 6.4 0.1 1 23 461 483 461 483 0.96

8 15 1.9e-05 0.0018 19.1 0.3 1 23 492 514 492 514 0.98

9 15 0.0014 0.13 13.2 2.8 1 23 520 543 520 543 0.97

10 15 0.00053 0.05 14.6 3.0 1 23 929 952 929 952 0.97

11 15 0.00076 0.071 14.1 0.1 3 23 1253 1273 1251 1273 0.97

12 15 0.0047 0.45 11.6 2.2 1 23 1340 1364 1340 1364 0.97

13 15 6.3 5.9e+02 1.8 2.5 1 23 1450 1473 1450 1473 0.86

14 15 0.013 1.2 10.2 0.4 2 23 1524 1545 1523 1545 0.94

15 15 1.5 1.4e+02 3.7 8.2 1 23 1551 1573 1551 1573 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00062	0.059	14.4	0.0	1	23	39	61	39	61	0.98
2	15	0.0002	0.019	15.9	0.3	1	23	75	97	75	97	0.98
3	15	2.6e-07	2.5e-05	25.0	1.3	1	23	103	126	103	126	0.98
4	15	0.12	11	7.2	0.2	1	23	219	243	219	243	0.92
5	15	0.28	26	6.0	5.3	2	23	249	271	249	271	0.95
6	15	1.1	1e+02	4.2	0.3	1	19	327	345	327	347	0.94
7	15	0.22	21	6.4	0.1	1	23	461	483	461	483	0.96
8	15	1.9e-05	0.0018	19.1	0.3	1	23	492	514	492	514	0.98
9	15	0.0014	0.13	13.2	2.8	1	23	520	543	520	543	0.97
10	15	0.00053	0.05	14.6	3.0	1	23	929	952	929	952	0.97
11	15	0.00076	0.071	14.1	0.1	3	23	1253	1273	1251	1273	0.97
12	15	0.0047	0.45	11.6	2.2	1	23	1340	1364	1340	1364	0.97
13	15	6.3	5.9e+02	1.8	2.5	1	23	1450	1473	1450	1473	0.86
14	15	0.013	1.2	10.2	0.4	2	23	1524	1545	1523	1545	0.94
15	15	1.5	1.4e+02	3.7	8.2	1	23	1551	1573	1551	1573	0.98

Sequence Information

Coding Sequence: ATGTGCGGTTTTGTGATTACAGTGACCGCTGACAGTGGACCGGATCAGCGACAGACCAGCGAGACTCAGACGGATGCTGGATCTTCGCCATTGgtcGAGCATCCGGAAGGAACGTATCCTTGTCCTGCATGCCCTACAGTACTCTCAACCTCCAGGGAACTAACGAATCATCTACGTGGTCACAATTCACCACGCAGTACGGACTGCAGCGGCGAGGAGGACTATTCCTGCGGGGTTTGTCACAAGGTTCTTAGCTCTGCCAGTTCTCTCGATCGGCACGTGCTCGTTCACTCGGGCGAAAGACCGTTCAAGTGCAAATACTGCGACATGGCCTTCACCACCAATGGAAATATGAACAGACACCTCAGGACGGCACATCGCGCGCTCTCGCCTCATAGTTGCACGGATTCCGAAGGGAGCAGCGATTCGGAAAAGCCTGTTAAGAGACGTCGCATCGAAGAGTACAATAACAACGAGATTGCCAAACGCAATTCTCCGGATCTCATTGAGAAACATAAATCTCCCAGCATGACCATTAACAAGAGGAAGTCGTTGGATTCAACGGATGAGGTTGAGTCACTGCGCAGGCACAAGATACTCCTGAACAGTTCCAGAACTGAGACCAAGAGCAACGTCTACGAGGACACGGCTGTTCACAATTGTCAAGTGTGCGGAAAACAGGATTTCGCCACTGCTGGTCTTCTCGAGGCTCATCTCGAGCGTAACCATCCTGAGGTCTTAGCGAAATGCGATATGTGCGAACTCTCGTTCAAGAATCATCGCGTGCTCAATCATCATCGGTTCATGACACACTTTAACGACAATTCGATTAACAATAGTTCACGGAACCTCAGGAACTCTGTGGTAGGTTTCGATGATTTGACATTCGTCGATTTCTCCGCTGACAAATTCCCGGCCATCGCCAGGGCCGTTTGCGAACAGTCCGTTCATAGGCCAGCTTCCGGGGAGGTTACTAGGTTCCAATGCGCCAAGTGTCTCAGGGCGTTCCCTTGCAGATCGGCCCTGGAGGCGCACGAGTCTGACTGTGGGATACCGAATTCTCAGAGCAGAACCCATGGCGAGGATCAGTCTAGGAGGGACAACTTCTTTGCTGGTCTTGATCTTCAAAACAAGGCTGCTCTCGCTGAGGCCAAGGAAGGCAAGGATCTGGCTGACATACAGAGCATCATTTCCATGACCTCTGGACCAATTTTACAGAACTTTCCTAGGTCCGACGCCAGCACACCGGATAACAGTATCAAGATCAATCCCAACCTTGGATCCTCCGGTTCATCCGGCACACCCTCCTCCGAGTACCACGAGGAAGAAGCACAGGACGCCTTCGCGGCGGAGTTCAGGAAGATGAAACTCAAAGGAGAATTTCCATGCAGACTTTGCACAGCAATATTTCCAAATCTTCGTGCTCTCAAGGGTCATAACCGGGCACATATGAATGTCGGTCCAGGTATGCCCTATCCATGTAATATGTGCCCGTACACGAGCACCGATAAAGCTACCCTTATCAGACATTTAAGGTCGCACAATGGCGATAGACCTTACGAGTGCTCTCTGTGCAACTATGCTTTCACGACCAAGGCCAACTGTGAAAGACACGTTCGCAATCGTCATGGTAAGCTCACCCGTGAGGATATTAAGAGCGTTCTGATATATCATCCCAACGAAGACTCCACGAATGATACCGTCGACCGCACGTCTCCCAGAGCCATCTCCAGGGAGGATGCTCGTAAAACTCTAGTCTATCACAGCGAACGTGACGAAGGCATCCATCAGCATCATCATTACTCTACGTTATCCATGTCCACTGAGCCCAAGTCTGAAATCCGAGTGATCGAGGAAGCCAAGCTTCGTCAGCCGGGAATACCCTCGCTGTTCGCCGTTAATCACTACGAAAATTCGGAATTCTTCTCTAGGCCAACGAGCATCCAATCCATGGAACTCGGAAGGCATTCCGAGGAGCCGGAGAAGGGTCAGGAACTGTTAGGAAAGCACAGTTACTCGAAGGACGACGAAGACGATCAAGACACCAGGTCGTCGGACGAAAGCGTGTCTCTAGTCAGCGAAACCAAATCCGAGCTGCACCAAAGAAATCAGGATGGTCCTATCGACTTGAAAAAGACTATCGGAGACTCCGGAAACGTGGTCGATTCCGGAGTCGAGGAAGCTCCCCTTGATCTCTCCATGGATGCCCTTGATCTCAGAAAAAGATCCAGGAGCAACGAAGCCGACCAGCCTAGTTCGTCCGAAGACTACTCCAGGAATCCAAAGGACTTCTATAATGCTACGAATCAACTTTTATTGACCCAAGCTCTCCTCAAGGCCGGACAGGCTGGGACTCAGCCTAACTCCCTGGAAGCTCTATATGCAAACGCTCATCTGATTTATCGGAATTTTGGCACCTTCCCAGCAGGTACCGGCCTGATACCACCTTATCTTCTTAACCCGCATTTATTTGGCCATGATTTTGCCATGAAGGACAGAATCCAAAAGGAACTGGTACGAGGTCTGCAGCTCACCAGCGGTGGAACTCTCGTGGAACCATCCGGATTCGTGTCAAACTTTTCTCAAGGACGTGAATTATCAGCGCATACAGCTACTGACCAAACCGATTACTCCAAACTGATTTCATCACAGCTGAATAACAAGGTCTCGGTACCACGTGAGAAGTTAGAAAACTCTCCCAGCTCGAATTCTGTCAAGATGGTGATAAAGAATGGAGTCCTCATGccaaaacaaaagcaaaggCGATACAGAACCGAGCGACCGTTCACCTGCGAACACTGCTCGGCCAGGTTCACCCTCAGGAGTAACATGGAAAGACATATTAAGCAACAGCATCCTCAACACTGGAGCCAAAGACCACGAGGTGGTCATTCCACGAGAGGTCGACCTCCAGCGAATCCTCCGACCTTGTTACAAAATCTTGGACAGTCCAGCATGTCCCAGCAGGTACAACAGCAGTATCAAAACATATTACCAAAGATGGGACAGAATGTGAGTTCCGAGTACGGAAAGCACGCTATTTCCGATCAAGTGAAGTACGCCATACTAGCACAACAGTTGAAAGGTAACAGAGTAGAGGAAAATGACACCGACGAGGAGCTGATCATCGACGAAGGTCCAACCGGAAGAGAAACACCGGTTACCCATCGTGAGAGTGAACAGCAGCCTACCAGTCTACTCAGGGGCAAACTGGAGAACCGTTCCGAGCTCAATAAGGACCAGTTAAGCATCCTCAGCGAACACGTTAACGAATTCTCAAAGGAATGTTCAGATCAGTCTCAGAACaacgaagaagacgacgagCACGATGCCAAGGGCAAAATAAAGTCTGAAATAAACGAGTCCAAGCCGGAAGTTGAGACTAACGCGGATGACGATGATCTAATGTCAGAGAACAGTCTGGTGAAGTCAGAAATGCCAGATGACATGGGAAAGAGAAGCGAATCGTCACGAGAGGACGAAAACGAAAGAACCGAAGATGGGACTGTTGATCTTGCTAGTGTTTCCAAGCTGCTGGACAATGCCTCCCAACAGTATCAACAGTTTCAACCTCAGTATCTTAGCGACGAGGAAGGTCTCGTTGCTTCTACGAGCGACTGCAACAATTCGGGTAGCGACGAGAAATCCGATTCCGGAAATTCAGTTAATTCCGGGACGTCGAGCTCctccaagaagaagaagaaaaagaagaagaagaagaaatctgCATACTCGATGGCGCCGAACAGAGTGATCTGTCCTTATTGCGAGAGGCCGTTCCCATGGACGTCCTCCCTCAGGAGACACATTCTCACTCACACCGGACAGAAGCCTTATCAATGTATACATTGCTCCCTTCTGTTCACGACAAAGTCAAATTGCGATCGTCATCTTTTGCGAAAGCACAAGACCAATCCCCACAAGATTCGTCGAGCAAGAAACTCATCGTCCCCGGAAGCGACAAACATTCCAGCAAACAGCAATAGCTTCTCAATGAGAAACGTCCCGGAGAGACCCTACAAGTGCAACCAATGTCCAAGCTCTACCTTCTCCACTCTGGGAAACTTGAAGAAGCACCGATCAACGAAgcatatagataaaaaaaataaatccaggTGCAACACGCCGTTGAGCGAATCCCAAAACAGTCCGCAGAGTTCGGGGAAGCATAACGATCAGAGTGGATACGAGAGTCAGTCCTCGAGTATTTCTGAAAACATGCAAAATTCGCCACAGAACGTCCCCGTTATCAAATTGACAACCAGTACGACCTCCTCATCTATCAACGACGCATCCCGTTCACGAAAAACTTCTCCAAGATCCTCGCCAGGACCCGCCGAAGCGCCTTTCAAGTGTCACCTGTGCGACAGCGGCTTCGCGGAGCGTCAAGATTGCCTTGAGCACATCAAGGACAATCACAAAAGGTCCTACGAGATGTTGGTGGCCAAGGGTGCGCTGGACATGGATATAGAAGCAGCAGAGGATCAGCAACAACCTCTGGTACATCAGCAGGCGAGCGACGGTGAAGAGAAACGTGGAAAATTTCCTGACTACAGTAATAGAAAGGTAGTTTGTGCGTTCTGCATGCGCAGATTTTGGTCTGCAGAGGATCTTCGTCGTCACATGAGAACTCATACCGGGGAGAGGCCATTTTCCTGCGACATTTGCTGTCGCCGCTTTACTCTGAAACACAGCATGCTGAGACATAGGAAGAAGCACGAATCCGTCGACTCTCCTATGTACGTGGGTACGAGTGGAGATGAAGAATCCGTAGCGAGTCAACCACCCACGATTACACCGAGAAGTCAGCAGCATCCAGCACTCGTAATGTCCTCCACGAGTGATAACAGATTGCGAGAGCGCGTATCCCTACCCACTGTGGAGGCTGTAGCTACAGCAGACGCTGCTCCCAGCGGTCTCATGAGGTACAACGCATACGAGAACCTCACTACTCTGACAGGGCAGCTGACCACCGTTCAACAAAGTGGAAATCTGGATGTTCCGGAAAATTCAGAGAACGATCTTATCTCGAATCTCCTTGGTATTCGCGATAAGAGCATTATAGACAGAGTGCTTCAGGCATCAGCCGACGACGCGGCCAAATTGCTCGGAGTCAAAAGAAACTAA
Protein Sequence: MCGFVITVTADSGPDQRQTSETQTDAGSSPLVEHPEGTYPCPACPTVLSTSRELTNHLRGHNSPRSTDCSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHRALSPHSCTDSEGSSDSEKPVKRRRIEEYNNNEIAKRNSPDLIEKHKSPSMTINKRKSLDSTDEVESLRRHKILLNSSRTETKSNVYEDTAVHNCQVCGKQDFATAGLLEAHLERNHPEVLAKCDMCELSFKNHRVLNHHRFMTHFNDNSINNSSRNLRNSVVGFDDLTFVDFSADKFPAIARAVCEQSVHRPASGEVTRFQCAKCLRAFPCRSALEAHESDCGIPNSQSRTHGEDQSRRDNFFAGLDLQNKAALAEAKEGKDLADIQSIISMTSGPILQNFPRSDASTPDNSIKINPNLGSSGSSGTPSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHMNVGPGMPYPCNMCPYTSTDKATLIRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNDTVDRTSPRAISREDARKTLVYHSERDEGIHQHHHYSTLSMSTEPKSEIRVIEEAKLRQPGIPSLFAVNHYENSEFFSRPTSIQSMELGRHSEEPEKGQELLGKHSYSKDDEDDQDTRSSDESVSLVSETKSELHQRNQDGPIDLKKTIGDSGNVVDSGVEEAPLDLSMDALDLRKRSRSNEADQPSSSEDYSRNPKDFYNATNQLLLTQALLKAGQAGTQPNSLEALYANAHLIYRNFGTFPAGTGLIPPYLLNPHLFGHDFAMKDRIQKELVRGLQLTSGGTLVEPSGFVSNFSQGRELSAHTATDQTDYSKLISSQLNNKVSVPREKLENSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLQNLGQSSMSQQVQQQYQNILPKMGQNVSSEYGKHAISDQVKYAILAQQLKGNRVEENDTDEELIIDEGPTGRETPVTHRESEQQPTSLLRGKLENRSELNKDQLSILSEHVNEFSKECSDQSQNNEEDDEHDAKGKIKSEINESKPEVETNADDDDLMSENSLVKSEMPDDMGKRSESSREDENERTEDGTVDLASVSKLLDNASQQYQQFQPQYLSDEEGLVASTSDCNNSGSDEKSDSGNSVNSGTSSSSKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCIHCSLLFTTKSNCDRHLLRKHKTNPHKIRRARNSSSPEATNIPANSNSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHIDKKNKSRCNTPLSESQNSPQSSGKHNDQSGYESQSSSISENMQNSPQNVPVIKLTTSTTSSSINDASRSRKTSPRSSPGPAEAPFKCHLCDSGFAERQDCLEHIKDNHKRSYEMLVAKGALDMDIEAAEDQQQPLVHQQASDGEEKRGKFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSPMYVGTSGDEESVASQPPTITPRSQQHPALVMSSTSDNRLRERVSLPTVEAVATADAAPSGLMRYNAYENLTTLTGQLTTVQQSGNLDVPENSENDLISNLLGIRDKSIIDRVLQASADDAAKLLGVKRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01474941;
90% Identity: iTF_01474941;
80% Identity: -