Basic Information

Insect: Cephus pygmeus
Gene Symbol: -
Assembly: GCA_036026175.1
Location: JAYRBY010000404.1:1227925-1231317[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.5 2.3e+02 3.1 1.2 1 19 426 443 426 447 0.72

2 16 0.3 28 5.9 2.0 1 23 450 473 450 473 0.95

3 16 2.2 2.1e+02 3.2 0.2 2 11 508 517 507 520 0.90

4 16 2.6e-07 2.5e-05 25.0 2.4 1 23 534 556 534 556 0.98

5 16 0.00074 0.07 14.1 3.3 1 23 564 587 564 587 0.96

6 16 0.00041 0.038 15.0 0.3 1 23 599 622 599 622 0.93

7 16 0.0044 0.41 11.7 2.4 1 23 649 672 649 672 0.95

8 16 0.077 7.3 7.8 3.2 1 23 678 700 678 700 0.96

9 16 0.001 0.097 13.7 2.4 1 23 715 737 715 737 0.96

10 16 0.57 54 5.1 1.0 3 23 745 766 743 766 0.88

11 16 8.3e-06 0.00078 20.3 5.5 1 23 780 802 780 802 0.99

12 16 4.6e-07 4.4e-05 24.2 0.3 1 23 808 830 808 830 0.99

13 16 0.011 1 10.4 1.1 1 23 836 858 836 858 0.98

14 16 0.0086 0.82 10.8 4.4 1 23 864 886 864 886 0.98

15 16 8.5e-07 8.1e-05 23.4 1.9 1 23 892 914 892 914 0.99

16 16 0.00048 0.045 14.7 1.8 1 23 920 943 920 943 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.5	2.3e+02	3.1	1.2	1	19	426	443	426	447	0.72
2	16	0.3	28	5.9	2.0	1	23	450	473	450	473	0.95
3	16	2.2	2.1e+02	3.2	0.2	2	11	508	517	507	520	0.90
4	16	2.6e-07	2.5e-05	25.0	2.4	1	23	534	556	534	556	0.98
5	16	0.00074	0.07	14.1	3.3	1	23	564	587	564	587	0.96
6	16	0.00041	0.038	15.0	0.3	1	23	599	622	599	622	0.93
7	16	0.0044	0.41	11.7	2.4	1	23	649	672	649	672	0.95
8	16	0.077	7.3	7.8	3.2	1	23	678	700	678	700	0.96
9	16	0.001	0.097	13.7	2.4	1	23	715	737	715	737	0.96
10	16	0.57	54	5.1	1.0	3	23	745	766	743	766	0.88
11	16	8.3e-06	0.00078	20.3	5.5	1	23	780	802	780	802	0.99
12	16	4.6e-07	4.4e-05	24.2	0.3	1	23	808	830	808	830	0.99
13	16	0.011	1	10.4	1.1	1	23	836	858	836	858	0.98
14	16	0.0086	0.82	10.8	4.4	1	23	864	886	864	886	0.98
15	16	8.5e-07	8.1e-05	23.4	1.9	1	23	892	914	892	914	0.99
16	16	0.00048	0.045	14.7	1.8	1	23	920	943	920	943	0.95

Sequence Information

Coding Sequence: ATGTTGAAGTTAATTCTACAAACACAAGAGGGACAACAAGTAGAAGTGTCCATACATCCCGAGGACACATTTgcagatttaaaaaagcaaTATGAAGGTCCAGAAAATTCTGTCTTACCAGAATTTTTAAAGCATCTCATTACCAATGGGGATGAAGTTAGCGAAGACACCAAAATACTTGATCATGTCACTAATAGTAcAACACTTGAATGGGCAATGGAAGACTCTATGGAAGACATGGATGATTTAGATTCAATAGATCCTTTACAAAATATCATGGTCGAAGCTCAGATAAAAGAATGCTGTGCAAATGAATGCTTCAATACTGAGTTAACGGCACCAGATAAAACATACTTTCCATTACCTACTGATGAAACTAGACTATCATCATGGCTAATAGGAATTGCTAGACCTGACCTACTCAACCCTGCTACACAATATAATTCCAATTTACATCAAAAGTACTTTGTGTGCAGTGATCACTTTCAACAGCATCATTTCTTAAAGGGTACAAATCAAGTTTTGAAACGTCGTGCTTGTCCATCCATAACTCGAGGATGTAATACTGAGGCAGTACTTAATTCATCCCTTCTGAAACCTCAACCAATGTATGTCAAGACAGAAGTTAAAGATTGTATATTGTTGCCAGCTGAGGAAAACGAAACACTTAATGATTCAGAATCCAACAGCGACATGGTACAAACCACCAATGTTCTTACAGAATCAGAACATCCTGGCATACTTTGTCGTTTGTGTGGTCAGACAACAGAAGATCCCATTTATTTCTATGCAGAGGAGGATAAACAAACTGAATACAGTATAgaggataaaattaatttatgtctTCCCATAACAGTAAATGCCAAAGATCCACTTCCAAAACAATTATGTCACCAGTGCCATGAAAAACTGAATACTTGTCACGACCTGGCTCTGACTTGCTTAGAAACCGAAGATATCTTGAAAAGTATGTTACAAACGAAACAGTTTCATGTAGATGAGACAAAGCATTGTCCTCTATGCATACAAGGAGAAATgcagataattaaaaaaagtgggATCTATCGAAAGGATAAGTTTGAGAAAAATCCGAACATCCTGAGTATCCCTAATACAAAAGTGCAACAAGTAGTGCCTTCACAGAATTGTGttatagaagaaaatgaagttgaTGATGTTACTGCAGAAATGGAAAACGACGAGTCAGAATCGttagttgaaaattttgaagatgaAGACATTTCTACGAGTCCTTTATCAGTACCAGATACAGAGTTTTCCTGttcaatttgcaataaaacGATACATTTCTACAATATCATTTATCACGCTGAGCAGCATTCTGGTCACCAGTGtgtaatttgcaaaaatgttaaattcaaAACTGCAAATGAGCTTCgggtacattttttaaaacatggGCATTCACACTTTGAGTGTGAATATTGTGCCATATCTGAGGACGTAATTGAAACGGCAGTAGAACATGTTAAATCATGTAAACCAGAACCATGGGATATTCAGTGCGATCGCTGcggtgaaaaatttacagaagATGAGGAGACACATACTTGCTCTGTCCCAGAGGACGAAGactgGTTCGAATGCGAGCagtgtgaaaaaaagtttaggcgaaaatcaaatttgacaATGCACATAAAGTCTCacgagaaaaaggaaacaataATGTACAAGTGTGTCTTTTgcaataaacaattttcacgCAAAGGACGTTTGCATACACATCTCTCAATTGTACATCAGGATATCGACGCCATTGTGAAATTCAAGTGTTATaagtgtaaaaaatgtaacgaAGCGTTCAGCAGCTCAGCCAATGCAGATGCTCATATAACGGAGAAACATTTTAGCCAGCTGATACTTTCtgatgtaaattatataaacgATCAATTTACAGTAGAGGAATTgaatttgacaaaattgtatatatgcGAGTATTGTGAGAGATGTTTTACAATACCGATCTCGTTACACGAGCATAGACAGAATGAACACTCACAAAATTCTGATTATCACTGCAACGTATGTAATAATTCCTACGAATCATATAAGCAACTTCTAAGTCACAAAAGTCTCCATAGCAAAAGTAATGAATTTGAAGATCTGGGTATCCGGCAGTATTACGTATGCAAATATTGTAACAAGACTTTTCTGCACTATGCATCCCTAAATGCGCATACAATTCAACACAGACAGCCGACACCTTATTTATGCCGACCATGTAACTTAAAATTTACTACGTATAAGGAGATGGAAACACATCGTCAAGCAACGCATCCTTATCAATCAATTCTACATGAGGGACCAAACGGCTCTTATCAGTGTCACTATTGCAAAAAGAAGTTTAGTCATGAACTTGCATTAATCAAGCATATACGAATGCACACTGGCGAACGTCCATACAAGTGTGCAGTGTGTGGCAAAGCATTTTCACAATCGTCAGGACTTTATACTCATCTTAAAGTTCATTCAAATTTGAGACCTTACACATGTTCTCAATGTCCACAGACATTTAAGATCAAGGGTGACAGAGATAATCATGTGAAAAAGCATTCTGGTAATCGACCATACAAGTGTGATTTTTGCCAGAAGGCATTCATGACACAGCATGTTTACAGTCAGCATAGGAAGATTCATACGAATGAAAGGCCATATAAATGTGATACATGTGGTGAGGCTTTCAGAAGATCACATGTGTTAACTGTGCATATGAGACGGCATACTGGAGAAAAGCCACATGCTTGTGATTTGTGTTCTAAAGCATACAGACAGCGAGGTGATTTGTTAAAGCATAAGAAGATGCAACATGGTACTAGCTCGAGTAGtgttttaaattctaatattacaaataactCAAACAGTACTTTAAAAAGGGCACAAAGTACATTATTGACTACTGATGCGACTACTGTACTTTTACCAATTTGA
Protein Sequence: MLKLILQTQEGQQVEVSIHPEDTFADLKKQYEGPENSVLPEFLKHLITNGDEVSEDTKILDHVTNSTTLEWAMEDSMEDMDDLDSIDPLQNIMVEAQIKECCANECFNTELTAPDKTYFPLPTDETRLSSWLIGIARPDLLNPATQYNSNLHQKYFVCSDHFQQHHFLKGTNQVLKRRACPSITRGCNTEAVLNSSLLKPQPMYVKTEVKDCILLPAEENETLNDSESNSDMVQTTNVLTESEHPGILCRLCGQTTEDPIYFYAEEDKQTEYSIEDKINLCLPITVNAKDPLPKQLCHQCHEKLNTCHDLALTCLETEDILKSMLQTKQFHVDETKHCPLCIQGEMQIIKKSGIYRKDKFEKNPNILSIPNTKVQQVVPSQNCVIEENEVDDVTAEMENDESESLVENFEDEDISTSPLSVPDTEFSCSICNKTIHFYNIIYHAEQHSGHQCVICKNVKFKTANELRVHFLKHGHSHFECEYCAISEDVIETAVEHVKSCKPEPWDIQCDRCGEKFTEDEETHTCSVPEDEDWFECEQCEKKFRRKSNLTMHIKSHEKKETIMYKCVFCNKQFSRKGRLHTHLSIVHQDIDAIVKFKCYKCKKCNEAFSSSANADAHITEKHFSQLILSDVNYINDQFTVEELNLTKLYICEYCERCFTIPISLHEHRQNEHSQNSDYHCNVCNNSYESYKQLLSHKSLHSKSNEFEDLGIRQYYVCKYCNKTFLHYASLNAHTIQHRQPTPYLCRPCNLKFTTYKEMETHRQATHPYQSILHEGPNGSYQCHYCKKKFSHELALIKHIRMHTGERPYKCAVCGKAFSQSSGLYTHLKVHSNLRPYTCSQCPQTFKIKGDRDNHVKKHSGNRPYKCDFCQKAFMTQHVYSQHRKIHTNERPYKCDTCGEAFRRSHVLTVHMRRHTGEKPHACDLCSKAYRQRGDLLKHKKMQHGTSSSSVLNSNITNNSNSTLKRAQSTLLTTDATTVLLPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00295494;
90% Identity: iTF_00293176;
80% Identity: -