Basic Information

Insect: Cephus pygmeus
Gene Symbol: -
Assembly: GCA_036026175.1
Location: JAYRBY010000058.1:234040-237094[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.2 19 6.5 0.4 3 21 257 275 257 276 0.88

2 13 0.016 1.5 9.9 0.2 1 23 282 305 282 305 0.91

3 13 0.00017 0.016 16.1 1.8 2 23 318 340 317 340 0.95

4 13 0.0046 0.43 11.6 0.1 3 23 353 373 353 373 0.98

5 13 1.1e-07 1e-05 26.2 1.5 2 23 412 433 411 433 0.97

6 13 0.0075 0.71 11.0 0.2 1 23 438 461 438 461 0.92

7 13 0.25 24 6.2 1.8 2 23 534 555 534 555 0.97

8 13 0.0002 0.019 15.9 1.4 1 23 564 586 564 586 0.95

9 13 0.0032 0.31 12.1 4.2 1 23 594 616 594 616 0.96

10 13 0.022 2.1 9.5 2.9 1 20 622 641 622 642 0.95

11 13 6.9e-05 0.0066 17.4 2.4 1 23 668 690 668 690 0.99

12 13 0.2 19 6.5 0.0 1 23 754 777 754 777 0.97

13 13 7.7e-07 7.3e-05 23.5 5.9 1 23 782 805 782 805 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.2	19	6.5	0.4	3	21	257	275	257	276	0.88
2	13	0.016	1.5	9.9	0.2	1	23	282	305	282	305	0.91
3	13	0.00017	0.016	16.1	1.8	2	23	318	340	317	340	0.95
4	13	0.0046	0.43	11.6	0.1	3	23	353	373	353	373	0.98
5	13	1.1e-07	1e-05	26.2	1.5	2	23	412	433	411	433	0.97
6	13	0.0075	0.71	11.0	0.2	1	23	438	461	438	461	0.92
7	13	0.25	24	6.2	1.8	2	23	534	555	534	555	0.97
8	13	0.0002	0.019	15.9	1.4	1	23	564	586	564	586	0.95
9	13	0.0032	0.31	12.1	4.2	1	23	594	616	594	616	0.96
10	13	0.022	2.1	9.5	2.9	1	20	622	641	622	642	0.95
11	13	6.9e-05	0.0066	17.4	2.4	1	23	668	690	668	690	0.99
12	13	0.2	19	6.5	0.0	1	23	754	777	754	777	0.97
13	13	7.7e-07	7.3e-05	23.5	5.9	1	23	782	805	782	805	0.98

Sequence Information

Coding Sequence: ATGGCTCTAACAAACAATTGGGAGAATAGCTGCAGACTTTGCTCTGAGCAGAAGAGTGAAATGTTACCTATATTTGGAGAAGAGGGTCTTCAACGTAAGGTTGCTCAGAAGTTACGAGCATGCTTACCGGTAATGGTGTACAAAACCGATCCACTGCCTAAACAAATTTGTCAGTTTTGTGCAGCGAGATTAGACGATGCATATGAATTTAGAGAGTATTGCTTGAATGTTTATAAGAGTATGCATATAAAACTACTTGCACTTAGAGAATCTGAATcagtgcaaatatttttggatgcTATGAGAAACTCTCCAGATCCTTGTCAGGTACAACTGTGCAAAGAGAAATCTAGAGCTCCACCACCATTGGTTCCTTTACCAGCAACACTGCCAATTGAAAGTCCTTCAACCCCAGTCAATTTTATGGATACTGTTCAATCAAATAGTTGTATCGAACCTTTGCCAGAATTACCATGTGAGgttcaaataaaagaagaacCCACAGAAGCAATTCTTAAAGATGATATAGCAGCAGAAGATTTGCCTGATTTTGAGAGAAGTTCGAGAAGTATATTTGACGAAACAGGATCCATGGAAGACAATAATATACTGCTTGAGGATCATCTGAATGATCCTCAAAATGCAAGATCAAATACCAAAAGGGAAGAGAAGCGAACTAGCATATTAGAACAGGTGCTAACGGGTAGTTTAACATTGAACGACCGTAAAGAATTGAAACCAAGGGTTGGTCTTAGTTCCCAATGGTGGTGTTCAccatgtaataattattatagAACAAAGGAGAGCTTAATGAAACACATGAATCTAAATTGTCCTCGTAAATATACATGCAAAACGTGCAACTCCATCTTCGAAACAGTGGAAGATCTTGCGAAACATGAGGGTAGTGATCACCTAAAGATTATTCTAGACTTCGACAAATCTCTCAAATCATGTAATCAGTGCGATCGTGAATTCATTAGCTGGGAAATGTTGCGACATCACAGACTACGTGATCACCAATCCACCACGTCGGTACTTGGATCGAATACCTGGTGCCCACTTTGCAATAGattttttccaaatgcCGAATTGTATGAAGTTCACAAGATGCTTCATGAACCAGAATCTCTTTCACAGTCATCGGTACTACCCACAATTTCAGTTCATCCAGTAGAAGAGCTACAGCGAGAGCTTAAAAGAGATCATTTTGCTGAATGTGTCAAATCACTAACTTGTCCCACCTGTGGAAAGGTATGTACGCAGCAGAGTGCACTATCTAATCACATGCGAACTCACGagccaaaaaaatacaagtgtgAAACCTGTGGCCGTTCTTTTGGACTTTTTATACGGTTAGCAGCACATCGACTTAGTGAGCATAATCAGCAGCCAGTGATGACTCCTGTTATGGCTAGTGTAGAACAGGAAGAAGCTCTAAATGCTGAAAGAGAAGCTAGGGAAGCTAGGGAAGCCAGAACTCGTGGAAGAACTAGGACTTATTCAGAGATCGTAGAAGATAACGGCGTTCCTATCGACGGTCCACCATCTGCAAAGCGTAACAGTCAATTAAATAGCAGTGGATCAAAGAACGTAGCGCGCTGTGGTATCTGTTCGCAATGGTTCAGCGATCACACAACGATGTTGACCCACTTGCAGACTCACTCGGATAGTTACGTGTACAAGAGTTTCAGTTGTCGTGTATGCAAAAagagttttaaagaaaaatggcagCTTCTCAGGCACGAGGTGTCTCATAAACGTGGAAGTTTAACTGTCCATTCATGTTCCACGTGTAATAAAACCTTCACGGATAAGGCACAGCACAAAGCACATGTAGCTACGCATGTTGTTGATAAGACCTATCACTGTCCGAAGTGCAATAAGATTTTCTTCAAAGAATTATCATTAATGGCACATCAGTGTCCTGGGAAGCCACTGTTTGGTAAGAGGTCTGCTTCGCAGAAATCTCAGTCCCAATTTAGTACCTCGAAGAACAAATATAAGTGCTCCAAATGCAGTGCCACTTTCACGAATTCACAATCTAGGAATTCTCATATGAGAGTGCATACAGAGGCTCACGCGATGATGCAAGTGAAGAAgcaagaattaaaaaaggaattagGAATGGAATCGATGCCAAAACTTTCACCGGAATCATCCCCCGGTACATCAATGCCACTTGAACCTAAAGtagaaattaaagaagaaagtacACCAACACCTGTCAAAAGGACACTCATAAGAACACCTGGAGGATATCGTTGTGGTGTCTGTCAGTCGCCATTTGTTCTACGTGAATTAGCTGTGGCTCATTTAAGATCAGCTCATCCTGTGATGCCGTATCAATGTCCATATTGTAAAAAGCGGTTCACAACACAGTATACATTTACGCATCATATTAAGACAGATCATCCAGACGAGTCTGAGAAGTAA
Protein Sequence: MALTNNWENSCRLCSEQKSEMLPIFGEEGLQRKVAQKLRACLPVMVYKTDPLPKQICQFCAARLDDAYEFREYCLNVYKSMHIKLLALRESESVQIFLDAMRNSPDPCQVQLCKEKSRAPPPLVPLPATLPIESPSTPVNFMDTVQSNSCIEPLPELPCEVQIKEEPTEAILKDDIAAEDLPDFERSSRSIFDETGSMEDNNILLEDHLNDPQNARSNTKREEKRTSILEQVLTGSLTLNDRKELKPRVGLSSQWWCSPCNNYYRTKESLMKHMNLNCPRKYTCKTCNSIFETVEDLAKHEGSDHLKIILDFDKSLKSCNQCDREFISWEMLRHHRLRDHQSTTSVLGSNTWCPLCNRFFPNAELYEVHKMLHEPESLSQSSVLPTISVHPVEELQRELKRDHFAECVKSLTCPTCGKVCTQQSALSNHMRTHEPKKYKCETCGRSFGLFIRLAAHRLSEHNQQPVMTPVMASVEQEEALNAEREAREAREARTRGRTRTYSEIVEDNGVPIDGPPSAKRNSQLNSSGSKNVARCGICSQWFSDHTTMLTHLQTHSDSYVYKSFSCRVCKKSFKEKWQLLRHEVSHKRGSLTVHSCSTCNKTFTDKAQHKAHVATHVVDKTYHCPKCNKIFFKELSLMAHQCPGKPLFGKRSASQKSQSQFSTSKNKYKCSKCSATFTNSQSRNSHMRVHTEAHAMMQVKKQELKKELGMESMPKLSPESSPGTSMPLEPKVEIKEESTPTPVKRTLIRTPGGYRCGVCQSPFVLRELAVAHLRSAHPVMPYQCPYCKKRFTTQYTFTHHIKTDHPDESEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00255299;
90% Identity: iTF_00255299;
80% Identity: -