Basic Information

Insect: Cephus pygmeus
Gene Symbol: -
Assembly: GCA_036026175.1
Location: JAYRBY010000729.1:239076-243101[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0017 0.16 13.0 0.4 1 23 195 218 195 218 0.95

2 9 9.5e-07 9e-05 23.2 2.2 1 23 223 245 223 245 0.99

3 9 1.4e-06 0.00013 22.7 1.9 1 23 251 273 251 273 0.98

4 9 0.001 0.098 13.7 0.9 3 23 281 302 279 302 0.96

5 9 4.2e-06 0.0004 21.2 1.4 1 23 308 330 308 330 0.97

6 9 5.8e-06 0.00054 20.8 1.0 1 23 336 358 336 358 0.98

7 9 0.0027 0.26 12.4 5.3 1 23 364 386 364 386 0.96

8 9 1e-07 9.7e-06 26.3 0.8 1 23 392 414 392 414 0.98

9 9 0.0025 0.24 12.5 1.3 2 23 423 444 422 444 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0017	0.16	13.0	0.4	1	23	195	218	195	218	0.95
2	9	9.5e-07	9e-05	23.2	2.2	1	23	223	245	223	245	0.99
3	9	1.4e-06	0.00013	22.7	1.9	1	23	251	273	251	273	0.98
4	9	0.001	0.098	13.7	0.9	3	23	281	302	279	302	0.96
5	9	4.2e-06	0.0004	21.2	1.4	1	23	308	330	308	330	0.97
6	9	5.8e-06	0.00054	20.8	1.0	1	23	336	358	336	358	0.98
7	9	0.0027	0.26	12.4	5.3	1	23	364	386	364	386	0.96
8	9	1e-07	9.7e-06	26.3	0.8	1	23	392	414	392	414	0.98
9	9	0.0025	0.24	12.5	1.3	2	23	423	444	422	444	0.96

Sequence Information

Coding Sequence: ATGGAGAGCAGGCCGGCGCCGCTCCGTTCCAGGCGGGTTTGTAGATTCTGCCTAACGGAGTCCGAGCCGCTGAATTTCATCTACGAGAGGGACCACAGCAAGCCCTTCCAGGTGCCGCTTACCCTGCAGATTATGTCGTGCGTCGCCATCGAGGTATACGCCGCGGATGGTATGCCACAGATGATATGCACCATGTGCCGCTGGAACTTGGACCGCTCCTACAAATTCAAGCTCCAGTGCAAGAAAGCAGACGAGGCTCTGAGAGCTTATCCACTGTCAGGAGTCTTACCGAGACCGTTTCCACCTATTTCAAATGACCCACCCGAGACAGGCACTAAAAGGTTGTCCGAGCAGAGGAGCCAGAATGAGCAGTCAAAGAAACCAAAGGTGGAAAACAATGAACGCGACAGAAGAGACACCAGGgagcgagagcgagaaagagaaagacaggCTGAGAAGCAGATAAGCAAAGTTGAGCGTCATGACCTGTATGATGAGGAGCAGGATGGCGGGAGTGAAGGCGATCATGAAGCCTCTAACGAGAAGGAAGACAGGAAATTAGAACCTGGTGAAATAAGGGTTCACGCCTGTGATCAATGCGATCGCACTTTCCCATTGAGACAAGCACTGCAACTTCACGTGCAGCGAGCTCATCGTGATCGTAACTACAAGTGCACTGAATGCGACCGCATGTTCTTCTCTAAGTACGATCTGGCTAAGCATATGACCACGCATTCCGAGGAGAAGCCATTCACTTGTCCGATTTGCCATAAGCAGTTCTCACGAGCTAACCTTCTCCAACGCCATGAGAAGGTTCACAGAGAGGAGTTGCGCTATGGTTGTCAGCACTGCGACCGAGAATTCTTTACTACTGATGAACTAGAAAAGCACGAGGAGACCGTGCATAAAGCCATCAAGCCCTATCAATGTAACATTTGCAACAAACGCTTTACTTACAAGCAAGGTCTAGAGCGACATGAGATGCTTCATAATGAGGACAACACCTTTGTCTGTGAATACTGCAAGGAAGCCTTCCGAACCAGCACTAAGCTTGCTCGTCATCTTTCTACCCATTCTGGACATAGGCCATATCTCTGCAAACTGTGTCCACGTACGTTTCTTCTCTCTCATCATCTTACTAGACACATGCGATCGCACTCTGTTGAAAAACGACACGTCTGCGAGGACTGTGGCAAAGCTTTCAAACGCAAGGAAAGCCTTGAGGTACATCAGCTGACTCATAGTAAAAGGTCAGGCATGGGTCTTACTTGCGACGTCTGTCAAGAGTCTTGTAGAAATAGGGCTGATTATGTGACACATATTAAACAGCATATTGAAGCTGGTGAGAAAATGGGGCCAGATGGATTACCCCCTGACACTACAAAGGATAAACCAGAGACAGATtctgaagaggaagaggaagaggaacaGTACTCTGACGGAGATGATGATTATGAGCCACCATCTTATATTGTGAAGAAACTTCCAAAAACTACTGATTTGCCAGACAGTGAGGAAGAACGTGACAGAACAGAGAAGGAAGACAGAAAGGAGCAGATCGTCTTCGTACGTGGAAAGGATGGAAACGTTGTCAAGAAAACAATCAAAACCTTGATGCCTATTCAACGCAGAGAGATTCAGGAAACGAAGATGAAGCCAAGCCCAGCTGGTCAATCAAATTCAAAGGTTACTCCGATCAAATCTGATGACACACCGAAGAGCCGCGTCGACGAGACCGAAGCGCAGGTACAGAAAATCGTCGCGTCAGTCTTCAAAGAACATAAAATACCCCTGAAACATCAGAACATTCCACAGGAACAAGCCAAGGACACCGCAGTGAGCTCCTCCAGTCAAATCCACACCAGGTCTCAGTCCAGCCACACCACGCCGAATCAGTCCATGAAGGAAGAGAAGCCCGAAACTGGCAGCGCTACTCCAAAATCCGTTAACACGGTAAAGGTAATCAAAAGGATCGTTGTACGAAAATCTGCAGGAGGTACCGAGACATCAGGATCAACAACCACCACCAAAGAGGCAGACAACACGTTGACGACTACTCAGGGTACTCCAGGGACAGCACACAAGGTCACGAAGCGAGTCATCGTTCGCAGAATCATCAGGCAGGGTGACACGACCCGAGAAGTCATCATGAATCCAGATGGGACAATCATTGATCCAGCAGAGCTTGCCAAACTGCCAGCTGGTAACGTTGTCAAAAGAGTAGTAGTAAAGAAGCCAATGGACAAGAATCAGACTCTAGCACAGAGCGTATTGCAAACTAGTGATCATCGTCAGGGTACACCCATCAAAATTGAACAGATGGTTACTGATTCTTCAAAATTGGAATTGAAAACATCTCAGACATCAACCGTATCTTCTGCATCTATGAAGACTGTTACAGTGCAGAAGGTCGAGCAGATTCCAGGAACTCCTTCGGGGCTGACTAAAGGAGATCAGGAGACCAAGGAGAAGCTGGAACAACTTGAGAAACGCGTAGAGCAGCAACGTCTGAAGATTGAAGAGCTGCAGGCCAGAAAGCAGCAGGAGTATGAACCCATGGACGAAATGTTACCAGAGAGACATGATGAATCTGAGGACGAGCAGCAGTTGCCATTAAAGAGGGTTTTCGTTAAGAGGAAGCAAAGCATTTATGATGAAGAACAAGAATataatgacaatgataaaCCAATTGTAACGAAGGAGGAGAATCAGAGTTCCTTGGAGGAGGAAAAGTTTAAGATTATCAAGGAAGACGTGAAGCAGCAAGAATTGACTACGGCGGAACCGTCTAAGAAAGATTATAAGAAACCAATAGTGATGAGTACGTCCAAGGTATATGGTAATAAGAAGATTGTCCTGATGAAAACTGAAGAGCCATCTGAAGTTGAAGAAATGAGTCGTGAATTAAGTAACATCCTAGATTCTGCAGAGAGCGTAGTAAAGATGCAAGAGAATGTTCTTAGCAGTCTCAGTCAGATCCCAGCTATTGGAGAAGGTGAGCGTAGAGTAGAGATCGAGACCACAGAAGTTGAAAATACAACACCTAGTGAACCGATGGAAGTAGTCGAAGAACAAATTCCTGAAGAATCTTGTAAGATTGAAGACTCTGGCGTAGTCACTAATGAGGATAGTCAGGGTAACCAAGATGTGGTGGAGCAACTGGAAAATGAGGACAATACCACTGTTCTGGATGAGAGTCATGGTGAGTCCTTATCTTTAACAGGTCAAGATCTGTCCGAAGCCACAGATATATTTGGAGCATCAGAGTCGACGTTAGATGGGCAAAAATCTGAAGACAACAATCTTGAAGATTCAGTAATCACCTTGTCTGAATCAAACAACACGATCAATCTGACTGACCCTAACGACACACAGGATAGCCTCGAGGATAAACTCTCTCAAATGGAAGGCTGA
Protein Sequence: MESRPAPLRSRRVCRFCLTESEPLNFIYERDHSKPFQVPLTLQIMSCVAIEVYAADGMPQMICTMCRWNLDRSYKFKLQCKKADEALRAYPLSGVLPRPFPPISNDPPETGTKRLSEQRSQNEQSKKPKVENNERDRRDTRERERERERQAEKQISKVERHDLYDEEQDGGSEGDHEASNEKEDRKLEPGEIRVHACDQCDRTFPLRQALQLHVQRAHRDRNYKCTECDRMFFSKYDLAKHMTTHSEEKPFTCPICHKQFSRANLLQRHEKVHREELRYGCQHCDREFFTTDELEKHEETVHKAIKPYQCNICNKRFTYKQGLERHEMLHNEDNTFVCEYCKEAFRTSTKLARHLSTHSGHRPYLCKLCPRTFLLSHHLTRHMRSHSVEKRHVCEDCGKAFKRKESLEVHQLTHSKRSGMGLTCDVCQESCRNRADYVTHIKQHIEAGEKMGPDGLPPDTTKDKPETDSEEEEEEEQYSDGDDDYEPPSYIVKKLPKTTDLPDSEEERDRTEKEDRKEQIVFVRGKDGNVVKKTIKTLMPIQRREIQETKMKPSPAGQSNSKVTPIKSDDTPKSRVDETEAQVQKIVASVFKEHKIPLKHQNIPQEQAKDTAVSSSSQIHTRSQSSHTTPNQSMKEEKPETGSATPKSVNTVKVIKRIVVRKSAGGTETSGSTTTTKEADNTLTTTQGTPGTAHKVTKRVIVRRIIRQGDTTREVIMNPDGTIIDPAELAKLPAGNVVKRVVVKKPMDKNQTLAQSVLQTSDHRQGTPIKIEQMVTDSSKLELKTSQTSTVSSASMKTVTVQKVEQIPGTPSGLTKGDQETKEKLEQLEKRVEQQRLKIEELQARKQQEYEPMDEMLPERHDESEDEQQLPLKRVFVKRKQSIYDEEQEYNDNDKPIVTKEENQSSLEEEKFKIIKEDVKQQELTTAEPSKKDYKKPIVMSTSKVYGNKKIVLMKTEEPSEVEEMSRELSNILDSAESVVKMQENVLSSLSQIPAIGEGERRVEIETTEVENTTPSEPMEVVEEQIPEESCKIEDSGVVTNEDSQGNQDVVEQLENEDNTTVLDESHGESLSLTGQDLSEATDIFGASESTLDGQKSEDNNLEDSVITLSESNNTINLTDPNDTQDSLEDKLSQMEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01199618;
90% Identity: iTF_01395331;
80% Identity: -