Basic Information

Insect: Cephus pygmeus
Gene Symbol: -
Assembly: GCA_036026175.1
Location: JAYRBY010000480.1:1181423-1185257[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.032 3.1 9.0 2.7 1 23 314 336 314 336 0.93

2 21 0.0024 0.23 12.5 0.1 1 20 344 363 344 364 0.96

3 21 0.0007 0.066 14.2 0.7 1 23 373 395 373 395 0.98

4 21 6.4 6e+02 1.8 0.1 2 23 422 443 421 443 0.78

5 21 0.044 4.2 8.5 0.8 1 23 451 474 451 474 0.92

6 21 0.0041 0.39 11.8 0.8 2 23 481 504 480 504 0.87

7 21 1.4 1.4e+02 3.8 0.2 2 23 537 558 536 558 0.91

8 21 0.13 13 7.0 0.6 2 23 567 589 566 589 0.93

9 21 0.00076 0.072 14.1 2.2 1 22 595 616 595 619 0.91

10 21 0.00029 0.028 15.4 6.5 1 23 703 725 703 725 0.98

11 21 0.0033 0.31 12.1 0.2 1 23 732 755 732 755 0.95

12 21 9.5e-05 0.009 16.9 2.1 1 23 761 783 761 783 0.98

13 21 0.00065 0.062 14.3 2.1 1 23 789 811 789 811 0.97

14 21 2e-05 0.0019 19.1 0.8 1 23 817 839 817 839 0.97

15 21 0.13 13 7.1 1.0 1 23 852 875 852 875 0.96

16 21 0.00014 0.013 16.4 3.9 1 23 891 914 891 914 0.96

17 21 0.0037 0.35 11.9 1.5 1 23 922 945 922 945 0.96

18 21 5.4e-05 0.0052 17.7 1.6 1 23 951 973 951 973 0.98

19 21 0.0068 0.65 11.1 6.9 1 23 979 1001 979 1001 0.98

20 21 0.00012 0.011 16.6 3.1 1 23 1007 1030 1007 1030 0.98

21 21 0.073 7 7.9 5.4 1 23 1036 1058 1036 1058 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.032	3.1	9.0	2.7	1	23	314	336	314	336	0.93
2	21	0.0024	0.23	12.5	0.1	1	20	344	363	344	364	0.96
3	21	0.0007	0.066	14.2	0.7	1	23	373	395	373	395	0.98
4	21	6.4	6e+02	1.8	0.1	2	23	422	443	421	443	0.78
5	21	0.044	4.2	8.5	0.8	1	23	451	474	451	474	0.92
6	21	0.0041	0.39	11.8	0.8	2	23	481	504	480	504	0.87
7	21	1.4	1.4e+02	3.8	0.2	2	23	537	558	536	558	0.91
8	21	0.13	13	7.0	0.6	2	23	567	589	566	589	0.93
9	21	0.00076	0.072	14.1	2.2	1	22	595	616	595	619	0.91
10	21	0.00029	0.028	15.4	6.5	1	23	703	725	703	725	0.98
11	21	0.0033	0.31	12.1	0.2	1	23	732	755	732	755	0.95
12	21	9.5e-05	0.009	16.9	2.1	1	23	761	783	761	783	0.98
13	21	0.00065	0.062	14.3	2.1	1	23	789	811	789	811	0.97
14	21	2e-05	0.0019	19.1	0.8	1	23	817	839	817	839	0.97
15	21	0.13	13	7.1	1.0	1	23	852	875	852	875	0.96
16	21	0.00014	0.013	16.4	3.9	1	23	891	914	891	914	0.96
17	21	0.0037	0.35	11.9	1.5	1	23	922	945	922	945	0.96
18	21	5.4e-05	0.0052	17.7	1.6	1	23	951	973	951	973	0.98
19	21	0.0068	0.65	11.1	6.9	1	23	979	1001	979	1001	0.98
20	21	0.00012	0.011	16.6	3.1	1	23	1007	1030	1007	1030	0.98
21	21	0.073	7	7.9	5.4	1	23	1036	1058	1036	1058	0.97

Sequence Information

Coding Sequence: ATGAATTCTACAAAAACGTTCATTGTGAAGGTAGAGAATTCACATATTACATTATCAGTAACAGACACATTTAAAGACCTGCAGATGAAGTTGAAAGAACATGGGATAGATGTAAACATAGCGTCGATGCTAATTAAAGGAAGAATGGTAAATGAGTCTTCTGTCGTATCAGAGTGCCTTAGTGTcgAAAGTAAGAATGTACAGGATGAGAGTGTAGAATTTGTATTACCAGATTTATCTGAAATGTCAGAAACAGAAATGATTTCTGATCAAGaTGTCGATACTCAATTGTGTCGATTATGTGGCATGACGACAGAAGACCCAgttgatatttttgaagaatcaaatattacagagataataaacaaattattaccGATATCTATATGTCAACAAGAAACACTATCACGATACATATGCAGCCCATGccataagaaaattattttcattcaggattttgttttactctgtatagaaaatgaaaaaaaattgtcaaaccTAACTACTTCAACAGACCAATCTACTGAAATTCCAATAAATGACAATACAGAAGttgcaaaaatattgcaaataaatgacaaaacaaataaatacagatGTCCCAATTGCAAAGTAAATCTAATCATCTCCAAAGATGTTCAATCGGAAAATTTTGATAGTGCCTTTCAAATAACTTTAAATTCAACAGATAGTACAGATGAATCTGAGATAAATGCAGAgctaaagaaacaaaaaacgGATGTCGTATCACGGAAAGGTACACACAAAGAAATAAGTACCAGATCGTCAccaaagaggagaaaaatggTTTCTGAGACCacagaaaatacttttcttacaATTGATCCGAATTTGGATGTTTCTGATATTACCAGTGAATTCGTTGATTTCGATACTCTGGAGGAAAGTAATGACGAGAGTATAAAAAGGCCAATGAAACATAAATGCGATATATGTGATATAGAATTTTCTTCGGAAGATCATTATCGGTTTCATGTGGATCGACACGAGACGGGATGTTTCGATGACTTCAAATGCTCTATATGTAAGAAAGAATTATCCTCCGAGGATAGCTTATGGGAACATCAAGAATGCTGTGAAATAGGTCTTGAATACTATAGTTGTACATTATGCCAGAAAACGTTccttgaaaaagaattattaaatgatcatATGCAAATTCACGATGAAGAGGATACAAAATCTCTTCATACAGATACGGATACAGTTCAAtcagaaaatggaaaaaaatcaactaaaTTAACATGTGAAGTATGTGGAGCGCGCTATGTATTACGGGAACgatatgaatttcatatagAAAGGCATAATTTTGGAAACATCAAGACTTTTTCATGTCTAATTTGTGAAAAAAGGTTTAAGAGTGAAAACATTCTGTGGGATCATTACCAATATCAACATAGAGCAGGTGAGAAATTCGCTTGTATAACTTGTGAGAAAACATTTGTCAAACGAGCAAACTTGAATTATCACTTAAAAACATTTGGCCACAAGGGTGGAAAATTCGTAAACAGCATAGAGCATAATCAAAGCACCGACTCCAGTAACGTGAAACTGTCTGATGTTGGTAAACCACGACCTAAGATAACTTGTTTAGAATGCGGAGCTCGTTTTGTTTTACAAGAAAGATATGAATTCCATATGGAAAGACATAAATCTGGAAAAATGGATGTTTGCGTGTGCAATCTGTGCGGTAGAGAAtcaacaaatgaaaatgttttgtgGGATCATTATCAGTATATGCACAAACGCACGAAACGTTATGTTTGTACTACAtgtggaaaattatttcacaaaCAGTCAATGTTGAGTAGGCATCAAGTCAAATACGGTCACAAAGgtacaaaagaaatagatatCGAAACGGATGGCAATGCTATAACAATAGACAGTGCTGCTTTTAAAAAGGTGATAGCTGAAGAGataatagaaatgaaatcCGTAAATTGCGTACTCTGTGGAGAAGTAGTATGGGGTGTAGACCCAAATTTGATAAACGATGCTGTTACCTGTTCGAATTGTGAGAGACCTGGACTGTCTTTGCAAGTAGATTCCGACGGTGCTAAGGTAATATCACGTCGTCAGTACCATTGCAACATGTGtaacaaacattttacaaCAAAAGATCGCCTAGAGTATCACATAATGCGCCACTCGGAAAATATGGAGGAATTTGTATGTAGTACTTGTGGAAAGGAACTCAGTACTGAACAAGCTTTGTTCGAGCATTACTTGTATGTGCACAAAGGTGCAAGACCACACGTTTGTGAGCTTTGTGGAAAATCTTATCAATTCAAAGCTCGGTTAAAGGAGCATATGAGAAGTCATAGTGGAGAACGACCATTCGCCTGTGAAATATGTGGTCAACGATGTATGACGAATAATGCGCTACGCTCTCACAAAAAAACTCATATCACAGAGAAGCGATTTCCGTGTCAGATATGTAAGAAGGCATTCAGAAAAAGGCAGGATTTGAACGAACACTTGGAGAGACACTGGAAGAATGACAAGACGATGACGTTACCACAAGTGTTTAGTTGTTCTATTTGTATGGAGATGTTTCCGACTTTTCGGATTCTGAAAAAGCACATGAAAGAGACTCACAGCGTGGAGAGTCAGGATCCTATATTGACTGAATTGCAACCATGGTTTGAGTGCGAAGACTGTCACGAGAAGTTCAAGCATCAAATGTCTTTGAAAGTTCATCGTGAGAGGGTTCACGAGGGTAAAATGAAGCCCGTTTATCATTGCGATTTATGTGACATCACATATAAGAATGCACGGGTACTCTCGAATCACATAAAGAATAAACACGAGGGTGGTAAACGGTATAAATGCGCTCAATGCGGTAAAGAGTACAATCAGTCTACGTCTTTacataatcatattttattgcatactGGAGAAAAGCCGTTCAGTTGTGAACATTGCGAAATGACGTTTCGCACTAAGGAATCCCGTGATCATCATCAACGAAAACATACTGGAGAACGTCCTTATAAATGTCCACATTGTGACAAAGCATTCGCTACTACAACTCAACGTCGAGAGCATCGAAAACGAGAACACGATGAAGGCAATAATCATCATTGTCCGGAATGTGGGAAAGTATGTTTTGGTGAACATGGCGTTAGAAGTCATTTAAACACTCATATGGCCGAGAAACAGCAGTCACAGAATGATATTACATAA
Protein Sequence: MNSTKTFIVKVENSHITLSVTDTFKDLQMKLKEHGIDVNIASMLIKGRMVNESSVVSECLSVESKNVQDESVEFVLPDLSEMSETEMISDQDVDTQLCRLCGMTTEDPVDIFEESNITEIINKLLPISICQQETLSRYICSPCHKKIIFIQDFVLLCIENEKKLSNLTTSTDQSTEIPINDNTEVAKILQINDKTNKYRCPNCKVNLIISKDVQSENFDSAFQITLNSTDSTDESEINAELKKQKTDVVSRKGTHKEISTRSSPKRRKMVSETTENTFLTIDPNLDVSDITSEFVDFDTLEESNDESIKRPMKHKCDICDIEFSSEDHYRFHVDRHETGCFDDFKCSICKKELSSEDSLWEHQECCEIGLEYYSCTLCQKTFLEKELLNDHMQIHDEEDTKSLHTDTDTVQSENGKKSTKLTCEVCGARYVLRERYEFHIERHNFGNIKTFSCLICEKRFKSENILWDHYQYQHRAGEKFACITCEKTFVKRANLNYHLKTFGHKGGKFVNSIEHNQSTDSSNVKLSDVGKPRPKITCLECGARFVLQERYEFHMERHKSGKMDVCVCNLCGRESTNENVLWDHYQYMHKRTKRYVCTTCGKLFHKQSMLSRHQVKYGHKGTKEIDIETDGNAITIDSAAFKKVIAEEIIEMKSVNCVLCGEVVWGVDPNLINDAVTCSNCERPGLSLQVDSDGAKVISRRQYHCNMCNKHFTTKDRLEYHIMRHSENMEEFVCSTCGKELSTEQALFEHYLYVHKGARPHVCELCGKSYQFKARLKEHMRSHSGERPFACEICGQRCMTNNALRSHKKTHITEKRFPCQICKKAFRKRQDLNEHLERHWKNDKTMTLPQVFSCSICMEMFPTFRILKKHMKETHSVESQDPILTELQPWFECEDCHEKFKHQMSLKVHRERVHEGKMKPVYHCDLCDITYKNARVLSNHIKNKHEGGKRYKCAQCGKEYNQSTSLHNHILLHTGEKPFSCEHCEMTFRTKESRDHHQRKHTGERPYKCPHCDKAFATTTQRREHRKREHDEGNNHHCPECGKVCFGEHGVRSHLNTHMAEKQQSQNDIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00293924;
90% Identity: iTF_00293924;
80% Identity: -