Cpul013451.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cephus pulcher
Gene Symbol
-
Assembly
GCA_030142455.1
Location
JARQTB010000895.1:713568-717655[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.12 9.4 7.1 1.2 1 23 357 379 357 379 0.97
2 20 0.95 75 4.3 0.4 1 19 386 404 386 404 0.97
3 20 0.012 0.94 10.3 0.9 1 23 428 450 428 450 0.98
4 20 0.016 1.3 9.9 0.4 1 20 504 523 504 525 0.94
5 20 0.035 2.8 8.8 7.1 1 23 537 560 537 560 0.98
6 20 0.095 7.5 7.4 2.8 1 23 565 587 565 587 0.97
7 20 0.00011 0.0085 16.7 0.5 1 23 623 645 623 645 0.98
8 20 0.00057 0.045 14.4 0.1 1 23 651 673 651 673 0.98
9 20 7.1e-05 0.0056 17.3 0.6 1 23 711 734 711 734 0.96
10 20 0.0022 0.18 12.5 0.5 1 23 740 763 740 763 0.92
11 20 0.41 32 5.4 0.3 1 23 770 793 770 793 0.92
12 20 0.00072 0.057 14.1 0.1 2 23 802 823 801 823 0.91
13 20 0.14 11 6.9 2.8 1 23 873 896 873 897 0.94
14 20 0.00036 0.028 15.0 1.2 2 23 912 933 911 933 0.96
15 20 0.00013 0.01 16.5 1.7 1 23 947 969 947 969 0.98
16 20 0.00048 0.038 14.7 0.2 1 19 991 1009 991 1011 0.96
17 20 0.04 3.1 8.6 0.7 5 23 1069 1088 1066 1088 0.92
18 20 0.085 6.7 7.6 0.3 3 23 1115 1136 1115 1136 0.90
19 20 0.12 9.1 7.2 0.8 3 23 1170 1191 1169 1191 0.91
20 20 0.012 0.96 10.2 0.4 3 23 1222 1243 1220 1243 0.94

Sequence Information

Coding Sequence
ATGGAGGAGATGGAGCAATTGCGGAATGTCGAGGATTTGTGCAGATTATGTCTCTCTGTTGATCAGCCAAAGTCCTCTGTGTTTCGTGGGGAAGACTCTTCTGTTTCGCTTGCTACTAAAATAGAGGCATGCCTCTCGATCGAGATTTCTCAAGGCGACAAGCTCTCTACCACAATATGCACAGAGTGTGTGACGAAGGTTAACCAGTGGCATGCTTACAAAGAATCCTGTCTACGGTCCCAGGATAAGCTGCAGGAGTGGTTGGCGAGACAGACTTCTTCAGAACTATTGGGAAATGCTGTAAAAGAAGAGCCTGAGGAAGTCAGCTATGAGCCTTGGGAAGATGATAGCTCGGTTGCAGGCACTGAACCCAGTGATAGAGATATTAACTACTCACCAACATCATCCTCCAACGTTCAGGAATATTCTaaggagaaaaagagtgaaGACGTTAATGAAGAGTCAAAATGTACCGAGTTGTTAAAAGATATAGTAAATGCAGAAGTTTTGGGTAGCTCCTCCAAAGAACCAGTTCATAAGGAACAGATTCCGATAAAAGCGATCAAGAAAGAACCATTATCaaatcatgaaaatgataCCAATGTCGAAGTGGCGCCAGTGCCAAGTGGAGAGTTGCTTCTCAATCCTTTAgccattaatataaataaaccaGACATGGTAATGGAAGCCGATTCAACCCAGAAATCAACTTCAGCGGTAGTCACTGtcaaaagaaaagtaagacGCGGTCCGCATACGCATTACAGAGGACACCGAGTGTTCAAACAGAAATGTTCTTTCTGTCAGATCCATCTACATTCAAAATTCACGTACGCGAAACACAtggcaaaatttcattcggacGCAGATAATGCTCAAGAAAGTCAGAATGTAGAAGCGGCAGAAAAGAAGGTGAAGGCGTCACCACCTCGAAAGACAAAAACTATAACGGACGCATCAGGAGAAGTTGAAGAGATGATCGAGGACGTGGAGGAGGAAATAGACATGATGGATCAGAACTCTTCCCTTTCGCAAGTTCAGCAAAGCATAATCAGCCAATTGAAGACATTTTCGTGTTACTCTTGTCAGCTTTCATTTCCGGACCGTCGCAGTACATTGTATCATATTCGAGAACACATGCCTGACCTACGACCTTACACTTGTGTGGCATGCCTAACTGAATTTTCCGATAGGTCCACTTACCAATCTCATTGTGGTGCGTCTGTCGAGTGTGCCATGAAGATAGCTCTTGTAGTGCCCACAATGGGGATCGAGAAGCTTTTCACGTGTAACATGTGCCTGCGGCCATTGAACAATCGCAAGGAACTGCTCAGTCATTTGTCCAAACATTCTGACAAGCAGTACGCAAAATTAACGACGTCAATGAGCGTTCCTCCAAAACTGAAACCCATAGCCTTACTGACATCTAAAGAGACGAATACCGTGTCCGCCGATCATATCTACGCTACCATGCCACATCCTTATAAAAATGGCGACCCTGCATTCAATCACGAGTGCAACTTCTGCGGGATGATATATCGATACAAGCCAAACATGTTGAAGCACCGTGATATATGCAAAAGACTTCCGCCGGATGCTCGTACTGTGTACAAGTGCGTCCATTGCGGCATGACCTTCAGGGTCTTCAAGAAGTTTCACTCGCACACAAGAGTGAAGCACAAGAAGAGGGAATTCGTTTGCTCAAAATGCTATGGGAAATTCCGATCGCCTCGTGATTACCTCTCTCATCATGAGAGCCATACGAAGGTCACGTCGAAGAATGAGAGGTACGTGGTAACGGAGAACGGACAAGACGTGATCCTGGATAACAAAGAGACCCGCGTGTCGAGgatcaatgataaaaagtataaCTGTGGAATGTGTGATATGGATTTTGGAACCAGGTCTGAGTTAACGAAGCACAAGAATGTGCATCTGAAAGTGAAGATCTACTCGTGCGTCATCTGCAGGAGTATGTTCAGTAGTGCAGGTGCTCTGGAGATACATATGAAGGAGCATGGGATTGAGGATCCCAGGGAGAGGAAAGCAAACAGTTCCTGCGTGGAGTACAGAACTCCTGGGAACGGTGAACATAGTGCAGGCCACAGTACAAATTCCAGTGGCATCAGGTTCAACTGTGACAGTTGCATCAAGAGTTTCTCCAACCTGGCGAATCTGCGACGGCATATCAGGAACGCGCACACGCCGAACGAGGTCTTCAAGTGTCCTGATTGTTTGAAGGTCTTCAGCGATAAAACTATTTACGAGCAGCATACCAAGGCTGAGCACAAGTCTTCCAGGCCGTCTTATCAGTGTATCAGGTGCACCAAGATCTTCGCCCTGCATGCGAACCTCGCGCTGCACGTCTTGAACGTTCACGAGAACAAACTGGGTACGAGGTTACAGTGCGACATTTGTGGTAAGAAATTTATCGAGGAGACATCCTTGCGGATTCATAAAGGCTGGCACGCAAGGGCCAGTTGTCGTTTGAACGCTGACAAGTTTCCAGATGACGCCAAGAGGGTGAAGATCGAAGCCATCCCCGTGGATTCCTTGAAGCCGGCCAAAGCCAGGAAGTCCTTGCCAAGTGTGCCAACTACTAGGCAGGTGCATCAATTTCAGTGTTACGTTTGCCATGAAAATTTCAGGGAGATTAATCGCCTCAAGGTGCATCTTCAGGATGTTCACCACGCGGACGGCAAGGACGAGAAGAGTCACGTGAACAAGGAGTTGCATTGTCAACTCTGCACCAGTGTGTTCCCGGACAACGACAGCTTGCAAAAGCACATGAAGTGGCACAAAGAGAATTCAATTTCGAGTGCGCAGAAACGCAAGAATTTCCAGTGCGACGTTTGCGGCAAGTACTACACCCTGAAAAAGAGTCTGGCGCGTCACAAGAAGCTTCACAAGGCGACAGCAGTGGTATCCTTGAAGCTTCAGTCTCTAGCAAGAAAGCAAATGGCTGCCATGTACCAGTGCCCACTATGTCGCAAGGTCTTCGATACCTACATGGGTCTACAGAGGCATAAGGTCTGTCATGGGTCCGAGTCGAGTGCACAGAAATCGTCCCAGTCAGGCCGTGCCACGAGGACGTCGATCAATACGGAGCACCAAGATCTGAGGAATCCAAAAATCGAATTGGACGATTCACCGGAAATCGATTCACTCGACAACAGTGGCGCCAGGAAACCCGTCACGTGCATACTCTGCAAAAAGGTCTTCCCCGGCATGAGCACGCTCTTCAAGCACAAGCAGACCGTTCACAACATCCGCTACAATAGACAGTCGAAGCAACCTAAAGTCGAGTTCATACCGATTCTCCAGCGAAGCGGTCGCGTCGGCTGTAACCTTTGTCCCAAGGAATTTCCAACGTTGCCAAGACTGAAGCAACACTTCACCCTGATTCACAAGTCTGAGCACAGTGGCTGCACGGCTCACTGCTGCGACCCTTCAAACGCTACTGTGTCcaaaacgaagaagaaggtcCATGGCGGGCTCGTTGTCTTCTGTAAACTGTGCGAGAAGCATTTTGATAACAAACCTGATGTGGTGGATCATCTGATTGGGAAGCACAGGTGCGGCGGCGACTTCGATAAGCAGGATAAATTCTTTTCCATGCTGAACTTGGACACGTACGTGGTGAACGGCGCAAACGGTACTATCTGTCCTACTTGCAATATCAAATATCCAAACTTGAGATCcctcaaaattcattatttcaaacTTCATGACTGTATATGA
Protein Sequence
MEEMEQLRNVEDLCRLCLSVDQPKSSVFRGEDSSVSLATKIEACLSIEISQGDKLSTTICTECVTKVNQWHAYKESCLRSQDKLQEWLARQTSSELLGNAVKEEPEEVSYEPWEDDSSVAGTEPSDRDINYSPTSSSNVQEYSKEKKSEDVNEESKCTELLKDIVNAEVLGSSSKEPVHKEQIPIKAIKKEPLSNHENDTNVEVAPVPSGELLLNPLAININKPDMVMEADSTQKSTSAVVTVKRKVRRGPHTHYRGHRVFKQKCSFCQIHLHSKFTYAKHMAKFHSDADNAQESQNVEAAEKKVKASPPRKTKTITDASGEVEEMIEDVEEEIDMMDQNSSLSQVQQSIISQLKTFSCYSCQLSFPDRRSTLYHIREHMPDLRPYTCVACLTEFSDRSTYQSHCGASVECAMKIALVVPTMGIEKLFTCNMCLRPLNNRKELLSHLSKHSDKQYAKLTTSMSVPPKLKPIALLTSKETNTVSADHIYATMPHPYKNGDPAFNHECNFCGMIYRYKPNMLKHRDICKRLPPDARTVYKCVHCGMTFRVFKKFHSHTRVKHKKREFVCSKCYGKFRSPRDYLSHHESHTKVTSKNERYVVTENGQDVILDNKETRVSRINDKKYNCGMCDMDFGTRSELTKHKNVHLKVKIYSCVICRSMFSSAGALEIHMKEHGIEDPRERKANSSCVEYRTPGNGEHSAGHSTNSSGIRFNCDSCIKSFSNLANLRRHIRNAHTPNEVFKCPDCLKVFSDKTIYEQHTKAEHKSSRPSYQCIRCTKIFALHANLALHVLNVHENKLGTRLQCDICGKKFIEETSLRIHKGWHARASCRLNADKFPDDAKRVKIEAIPVDSLKPAKARKSLPSVPTTRQVHQFQCYVCHENFREINRLKVHLQDVHHADGKDEKSHVNKELHCQLCTSVFPDNDSLQKHMKWHKENSISSAQKRKNFQCDVCGKYYTLKKSLARHKKLHKATAVVSLKLQSLARKQMAAMYQCPLCRKVFDTYMGLQRHKVCHGSESSAQKSSQSGRATRTSINTEHQDLRNPKIELDDSPEIDSLDNSGARKPVTCILCKKVFPGMSTLFKHKQTVHNIRYNRQSKQPKVEFIPILQRSGRVGCNLCPKEFPTLPRLKQHFTLIHKSEHSGCTAHCCDPSNATVSKTKKKVHGGLVVFCKLCEKHFDNKPDVVDHLIGKHRCGGDFDKQDKFFSMLNLDTYVVNGANGTICPTCNIKYPNLRSLKIHYFKLHDCI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01474139;
90% Identity
iTF_00297773;
80% Identity
-