Basic Information

Gene Symbol
ZNF536
Assembly
GCA_030142455.1
Location
JARQTB010000754.1:426490-429037[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.2 15 6.4 1.5 1 23 409 431 409 431 0.96
2 9 0.00081 0.064 13.9 5.3 1 20 437 456 437 459 0.97
3 9 5.9e-06 0.00047 20.7 1.6 1 23 465 487 465 487 0.98
4 9 1.2e-05 0.00097 19.7 3.1 1 23 493 515 493 515 0.98
5 9 1e-07 8.2e-06 26.2 0.2 1 23 526 548 526 548 0.98
6 9 1.3e-09 1e-07 32.2 0.6 1 23 554 576 554 576 0.99
7 9 8.8e-06 0.00069 20.1 0.6 1 23 582 604 582 604 0.95
8 9 2.4e-05 0.0019 18.7 0.1 1 23 610 632 610 632 0.93
9 9 0.00013 0.011 16.4 0.1 3 23 640 660 638 660 0.97

Sequence Information

Coding Sequence
ATGAGTTGGGAAATAAGTTATGCGGATATGTGTCGCGCTTGTATGAAAGTCGACGGCGTTCTGTTGCCCATGTATGGCGACGAGATAatcagtaagaaaaaattgccTGATAAATTGGCCGAGCTTACTTCGGTAAAAattgataaatttgatgGCTTACCAAATATGCTGTGTGCCAAGTGCGCATACAGAACAGATGCATTTTATGACTTCAAACGACAAGTTCAAGCTACGGAGAAGAGATTGAGAGAAATGTTTCAAATAGATTTATGTCCTGTGATTaaggagGAAGTAATAGAGGAGGGAAATGAGCAAGttgaattatatgaaaatgctAATGAATATGTGGATAATGATCTGCAGTATGAATCACAAAATTTAAGCAGTAGGAATAGTTTGACTGAGGAAACAGAGAATGGAATTGCCTTACATGAAGTTTTTAGTGGAACAGTAAAAGCTTGTGAGAGTGGAAATCTTACGGATGAAGACATAGACGAAGGCACTGAATATCTGGAAGATGCTTCAGTAGACACAGAAAAAACATATGAGCCAAATGATTTCAATCACATATTTATTCGGGAAATACAGCAAATTGCAACACAAGCCAATACCATTGTTAAAACCGAAGTACCTGATGCAATTACAAATATGTTTGAATCCCaagatttaaattatacaataatgtaCATACCTGAAAACGAGATGGACCCACTAGTACAAACAGGTGggcaaaatatattcatcaGTGAAGAGAAAGCCAATGAGTCCAGTAACCATGATAGTTTTATAACTTCCTGCCCCTCGGAAGATATAATCACTACTGAAAAGACCAACAAAGGCACAGAATCCTTAGGTATCGAAGATTCTGATAGTCATGTGACAGTTAATACAGAAAAGAAGTGCTGGAAAACTTCAATTTGCAAGACAAACATCAAGGAAGAAAATACCACAGTGGATAATGATGAAGCCTCAACTTCTCAGAAGCAAAAATCAGTAGATCAAAGTATACAgaacgatgatgatgatgatgaagattCTGACTACTTTGCGGATCCCAGAGATAATATACTAGGTAGTGTGACAGACACCATTATGAGAATCAAAGAGATAAAAGTGAACGATGATATCATCGAATACCAGTGCACGCTCTGTATGCAAAACTATGATCAAATAACTGGAGTGCTCATTCATATGGTAGACAATCATGTACCAGCAGGTGGACCATTTTTCTGTATGGTATGTGAAATGGATCTAGAGAGTCACAGGAAGCTACGAGCTCATGTGAAAACACACACTGGTCGACTACCATACACCTGTTTCATCTGCAAGAAATCTTACTCAATGAAACGATATCTTAAAAGACATATGGTCTGTCACACAGACTTCCCAAGACACCGCTGCCCCAAGTGTGGTCTCAGATTTAAGGTCAAATCTGAACTGGAATCACATGTAACGACTCACATCCATGGTGCTCCATACGCATGCAGCCAGTGTACCCGTGTATTTAACCACAAAGGTAATTACAAGCGTCACTTGATCACTCATCTGGATCCTCAGGGTTTACATTTACCCAAGTATCCCTGTGAAGTCTGTGGAAAACGCTTTCCAAATAGACGCACACTGGAAATTCACATGCGTGTTCATACTGGTGAAAAACCATTCAAATGTGACGTATGTGGGAGATCATTTTCACAGCAAGGAAATCTTCAGAATCATATGAGAATTCACTCTAATCCTCGTAGTTATACGTGTGAGGTATGTGGGAAAAGATTTAACCAAAGGGCCACCCTAAGAGACCACAGTTTACTTCATACAGGTGAAAAACCATATGTTTGTACCGTATGTGGTGTAGCCTTCACATTCAGTGCTGCATTGCGTCGCCATATGTGGACTCATACTGGTGGAAAACCATTTGGCTGTGAAATTTGTAATGCTGGTTTTGTTGGCAAGTACGAGTTAAGACGTCACATGAGTATACACAATGAGGGTTCAAAAACAAAACGAAAGCGAAACCCAAAGAAGAAGATCGAAAAGCCACCGGAAGAACCAAAAgaggaaattattattatagaagaTAATCCCAATGGAACGCATACTATATTAATAGAGCAAGTACTTTTAGCACAGGACACCACTCAGCCTGTACCCCAGGAagaatctgaaaaagaaaatgttgatgcaatttttaatcttataCAATATTGA
Protein Sequence
MSWEISYADMCRACMKVDGVLLPMYGDEIISKKKLPDKLAELTSVKIDKFDGLPNMLCAKCAYRTDAFYDFKRQVQATEKRLREMFQIDLCPVIKEEVIEEGNEQVELYENANEYVDNDLQYESQNLSSRNSLTEETENGIALHEVFSGTVKACESGNLTDEDIDEGTEYLEDASVDTEKTYEPNDFNHIFIREIQQIATQANTIVKTEVPDAITNMFESQDLNYTIMYIPENEMDPLVQTGGQNIFISEEKANESSNHDSFITSCPSEDIITTEKTNKGTESLGIEDSDSHVTVNTEKKCWKTSICKTNIKEENTTVDNDEASTSQKQKSVDQSIQNDDDDDEDSDYFADPRDNILGSVTDTIMRIKEIKVNDDIIEYQCTLCMQNYDQITGVLIHMVDNHVPAGGPFFCMVCEMDLESHRKLRAHVKTHTGRLPYTCFICKKSYSMKRYLKRHMVCHTDFPRHRCPKCGLRFKVKSELESHVTTHIHGAPYACSQCTRVFNHKGNYKRHLITHLDPQGLHLPKYPCEVCGKRFPNRRTLEIHMRVHTGEKPFKCDVCGRSFSQQGNLQNHMRIHSNPRSYTCEVCGKRFNQRATLRDHSLLHTGEKPYVCTVCGVAFTFSAALRRHMWTHTGGKPFGCEICNAGFVGKYELRRHMSIHNEGSKTKRKRNPKKKIEKPPEEPKEEIIIIEDNPNGTHTILIEQVLLAQDTTQPVPQEESEKENVDAIFNLIQY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00255264;
90% Identity
iTF_01473363;
80% Identity
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