Basic Information

Insect: Cephus pulcher
Gene Symbol: -
Assembly: GCA_030142455.1
Location: JARQTB010000471.1:122106-123842[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.5e-05 0.0028 18.2 1.2 2 23 187 208 186 208 0.96

2 10 3.2e-07 2.5e-05 24.6 2.5 1 23 214 236 214 236 0.98

3 10 7e-05 0.0055 17.3 0.1 1 23 242 264 242 264 0.97

4 10 0.0011 0.087 13.5 3.2 3 23 272 293 271 293 0.95

5 10 1.4e-06 0.00011 22.6 0.8 1 23 298 320 298 320 0.96

6 10 9.5e-07 7.5e-05 23.1 0.7 1 23 330 352 330 352 0.98

7 10 7.5e-06 0.00059 20.3 1.1 1 23 358 380 358 380 0.98

8 10 4.8e-06 0.00038 20.9 0.5 2 23 387 408 386 408 0.97

9 10 3.1e-05 0.0025 18.4 1.8 1 23 414 436 414 436 0.99

10 10 0.00011 0.0085 16.7 0.1 1 21 442 462 442 463 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.5e-05	0.0028	18.2	1.2	2	23	187	208	186	208	0.96
2	10	3.2e-07	2.5e-05	24.6	2.5	1	23	214	236	214	236	0.98
3	10	7e-05	0.0055	17.3	0.1	1	23	242	264	242	264	0.97
4	10	0.0011	0.087	13.5	3.2	3	23	272	293	271	293	0.95
5	10	1.4e-06	0.00011	22.6	0.8	1	23	298	320	298	320	0.96
6	10	9.5e-07	7.5e-05	23.1	0.7	1	23	330	352	330	352	0.98
7	10	7.5e-06	0.00059	20.3	1.1	1	23	358	380	358	380	0.98
8	10	4.8e-06	0.00038	20.9	0.5	2	23	387	408	386	408	0.97
9	10	3.1e-05	0.0025	18.4	1.8	1	23	414	436	414	436	0.99
10	10	0.00011	0.0085	16.7	0.1	1	21	442	462	442	463	0.95

Sequence Information

Coding Sequence: ATGACATTGGCAAACGTTGCCACATTCTCCGAAAATTTTGCACTCATTCTgttaATCGATGGGAAGAAGTCCTCAAATCCGTTGGATCAAAGGAACGGAATACTACTGTCGGAAAGTTCTTCGGCCCCAGAGACCACCGGGGCTAATGACCAGGGCAGCCCGAGTGCATGCGGAACCAAGAGCTTCTCCGTTTCCGCTTACGCCACACAGTCGGGAACGTCGACACATGTCGAGAAGGATTCACGCGCTGAAGAGGACGAGACCCACCGAACACCTTGTGACTCGACTGAATCACAGCAGCCGGCATACTACGCGATATTCGCTGGAGCTTTAAAGGATGTGGACAGCGTTTTCTATCTTCCACAGCGAGAGTACGACGACGCTCACGGTGTCTATGAACGTAATGAGAACTTGAAGATACCGGTTGACTTCAGTCCGTCGAATGAGGCGCAAGCTTGTTTGGATGCTGCGAGGCAGCCATTAAATACCGACTTGGATGGAAGGGGAAGGATCAAGGGCTTGAAGGCTGATCGAAATTCAGATCCGGAAAAGAGGTTGAAGTGCGAGGAGTGCGATCGCGTTTGCGTAAACAAGGAACTCCTGAGAAAGCATAAGATTGTCCATAGCAAAGTCTTCCGGCACGAGTGTCAAATCTGCGGAAAGAAATTCAAACGGTCGACCGAGCTCAAGATACACGGGAGGACGCACTCCTCCGAAAGAAATTTCGCGTGCGAGCTCTGCGGCAGTGCTTTCAAGCTGAAGTCTCAGTTGGTAGCCCACGCGAGGCGACACACAGCCGATTACAGGGTCTTCTGTAAGCTCTGCGGCAAGGGCTTCCACAATAACAGTGACTACCAGTCTCACAACAAAGTAAAGCACGTTGCCAAGGAACATGCGTGCCCATCCTGTGGGAGGTCCTACAGGGAAGCATCCCTCCTTCGCCGCCATCAGAGAATCCACCAGCCGGATTACGTGCCGGACAAACGATTTCAGTGTGAGATTTGCGGCAAGACGTTTGTTCTTCGCAAGTCCCTCGAGATGCACTTGAAAAGTCACACAGGAGAGAAAAGATACAAGTGTGACGTTTGCGGCAAAGGACTCTGCACGAGGTCCTCCCTCCTTGATCATATAAAACTTCATACCGGGCAGAAGCCGATCGTCTGTGACCTGTGCGGACGCGCCTTCACTAAAAGATCCACGATGATGGTGCACAGAAGGACTCACACCGGTGAACGACCGTATCGATGCAACGTGTGCAATAACACTTATACGCAGAGGACGAGCTTGGTTATTCATCAACGTTATCATTCCGGTGAACGGCCATATATTTGCAAACTTTGTTCGAGAGGATTCGTTTCCAGTGCGCAGCTCAGGGTCCACCAGAATTCTTGCCGATGA
Protein Sequence: MTLANVATFSENFALILLIDGKKSSNPLDQRNGILLSESSSAPETTGANDQGSPSACGTKSFSVSAYATQSGTSTHVEKDSRAEEDETHRTPCDSTESQQPAYYAIFAGALKDVDSVFYLPQREYDDAHGVYERNENLKIPVDFSPSNEAQACLDAARQPLNTDLDGRGRIKGLKADRNSDPEKRLKCEECDRVCVNKELLRKHKIVHSKVFRHECQICGKKFKRSTELKIHGRTHSSERNFACELCGSAFKLKSQLVAHARRHTADYRVFCKLCGKGFHNNSDYQSHNKVKHVAKEHACPSCGRSYREASLLRRHQRIHQPDYVPDKRFQCEICGKTFVLRKSLEMHLKSHTGEKRYKCDVCGKGLCTRSSLLDHIKLHTGQKPIVCDLCGRAFTKRSTMMVHRRTHTGERPYRCNVCNNTYTQRTSLVIHQRYHSGERPYICKLCSRGFVSSAQLRVHQNSCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01131004;
90% Identity: iTF_00294669; iTF_00293908; iTF_01475637; iTF_00296983; iTF_00293146; iTF_01473354; iTF_00297742; iTF_00298508; iTF_00296207; iTF_01474878;
80% Identity: iTF_00296983;