Cpul005476.1
Basic Information
- Insect
- Cephus pulcher
- Gene Symbol
- lola
- Assembly
- GCA_030142455.1
- Location
- JARQTB010000435.1:1556991-1560440[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2 5.9e+03 -2.7 0.1 4 21 102 119 101 121 0.77 2 2 1.6e-08 1.9e-05 24.5 0.0 9 40 420 452 419 457 0.85
Sequence Information
- Coding Sequence
- ATGGAGGACGATCAGCAGTTCTGCTTAAGGTGGAATAATCATCAGAGTACGCTTGTCCAGAACTTCGATACCCTCTTAGAGAGTGGCACGTTGGTTGACTGCACCTTGGCGGCGGAGGGGAAGTCTTTAAAGGCCCACAAAGTGGTCCTCTCCGCGTGCAGTCCATTCTTTGAGGGCCTCCTCAGCGAACACTATGACAAGCATCCCGTGTTTATACTCAAGGATATTAAGTTTAAAGAACTCAAAGCCATGATGGACTACATGTATAAGGGAGAAGTAAATATCTCTCAAGACCAATTGGCAGCGCTCCTCAAGGCCGCCGAGTCCCTGCAAATCAAGGGTCTCTCGGAATGTAAAACGAGCGGCAATAGTGGCGGCGGCGGGGGTGGTTGTGGCGGAAGGAGCGAGCCCAGACCACCGAAAGTCGTCTCACAGCCAACGGCGCCGTCGTTGGACATTCCCCACCCGTCTTCCGGTCTCACCATAGAAAAGAACATCAAAGTTCCTAGGCAAAGTTTGACACAGGTCTCCGTCGGTGATCTGCCAGAAGACTCCGCCAGTCCCCAGCTTCCCAGAGGGCTCTCCTCCAGgGAAGGCTCGCAAAGTCCGACAaatgcaaaaagaaagaaaaggtttCGCGGTAGGAGCCTGGGCGACGACAATTCCGTTGAAAACCACGACGCATCGAACTCGAGTGACATGCCCCAGCAAATGGGGGTTTCGTCACTCGCGATCGCGCCCGTTACCAACGAAAAGTCACACGCCGACCCCACAGACTCTCTCGGTAGTTCAGTGCTAATGCAACAGCTGGCCAAACCTGCCGACGAGATGCTCCAGATGCCGCTGGAGAATCAACAGCCTAATGATAATTTGATAGAACCAAAGTCCGAGTACCTGGAGGATCCGGAGGAGAGTGTTGAGGATCTAACCCTCGATGACGACATGAACGATTTAAATGAGATGGAACAAGATACCAACAGAGCTGGCCCTTCACACGAATCCTCCCAGCACCCTGGTGGGGGGGCGGGAGCGCGGGCTCGGTCGAGCGGGAATTTGAGTTATGGTGATGATGGTGACGGTGAGGGTATTAGCGCCTGCGATGGTGCTGAAGGTGCCCTGTGGGCCTCACATTTCCTCGAATGTAAAAAGGGCCCTAACACGAGGCGACCTCGACCGGACGTTGACGTAGGCGCGTTGCTCAAGTCCCTGGCTAATAAGCAGGGTAGAAAGTATAGCTTAGACTCGGTTAAGATGTCTCTGGACGCGATTTTGCAGCAGGGCGTTAGCACCACTCAGGCCTCTGAAATGTACGGCATTAATCGCTCGACTCTGCAGttctatttgaaaaaattgaacgtCGTAAGAAGACGATGGAGACAACCTAGCAACTGGATGCAGTCTAGTCAGTCTTCGACTTGA
- Protein Sequence
- MEDDQQFCLRWNNHQSTLVQNFDTLLESGTLVDCTLAAEGKSLKAHKVVLSACSPFFEGLLSEHYDKHPVFILKDIKFKELKAMMDYMYKGEVNISQDQLAALLKAAESLQIKGLSECKTSGNSGGGGGGCGGRSEPRPPKVVSQPTAPSLDIPHPSSGLTIEKNIKVPRQSLTQVSVGDLPEDSASPQLPRGLSSREGSQSPTNAKRKKRFRGRSLGDDNSVENHDASNSSDMPQQMGVSSLAIAPVTNEKSHADPTDSLGSSVLMQQLAKPADEMLQMPLENQQPNDNLIEPKSEYLEDPEESVEDLTLDDDMNDLNEMEQDTNRAGPSHESSQHPGGGAGARARSSGNLSYGDDGDGEGISACDGAEGALWASHFLECKKGPNTRRPRPDVDVGALLKSLANKQGRKYSLDSVKMSLDAILQQGVSTTQASEMYGINRSTLQFYLKKLNVVRRRWRQPSNWMQSSQSST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00294592;
- 90% Identity
- iTF_00293065;
- 80% Identity
- iTF_00295364;