Basic Information

Gene Symbol
KDM5A
Assembly
GCA_030142455.1
Location
JARQTB010000737.1:201612-214354[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-25 4.1e-22 78.6 0.0 2 89 108 191 107 191 0.94
2 2 5.5 1e+04 -2.9 0.1 49 81 828 858 825 862 0.64

Sequence Information

Coding Sequence
ATGGTCTCGAAGCTCGACGTAAATATCGGTACCGAGCCTCATCTAGGGAGCCATCAGCGAGCCAAAGATATGGGCGACAGGAGTGAATCGGATTTCGAGTTTGTCATTCCACCGGAGGCTCCAGTTTTCGAACCCTCCGCTGAGGAGTTCCTGGATCCACTTGGATATATAGCCAAGATACGACAGCATGCTGAGAAATCCGGTATCTGCAAGATCAAGCCGCCACCCaattGGCAACCACCCTTTGCAGTAGATGTGGACAAATTTAAATTCGTTCCTCGAATTCAGAGGTTAAACGAATTAGAAGCCAAGACTAGGATTAAGTTAAATTTTCTAGATCAAATTGCTAAGTTCTGGGAGCTCCAAGGATCCTCCTTGAAAATTCCATTGGTTGAACGGAAGGCATTGGATCTTTATTCCTTACACAGAATCGTTACAAGTGAAGgaGGTATTGAGACAGTGACTAAAGAAAGAAGGTGGGCCAAGATAGCGAATAAACTTGGTTACCCATCAGGCAGGAGCGTAGggagtattttgaaaaatcattacgaAAGAATTCTATATCCATTTGACGTCTTCAagcaaggaaaaatattaaccgATATTAAATTTGAACCCGATTCGGAGGCTAATGAGAAGAAGGACAGGGATTACAAGCCTCATGGTATAATATCAAGACAACAAATAAAACCACCAAACGAGAAATTCTCCAGGAGATCGAAGCGCTTTACAGGTCAAGAGGAGAAACAGGAATCCACAGTATCACCAATAAAACTGGAGGATTGTAAAGATGAGTGCGAGTCCGATGGTGATTACAAAGACATTAGGGAGAGGGATAGGAACAAAGATAGGAGTCAAGATGACAACGATAATAGTAAGGAGCTCAAGAAACTACAGTTTTATGGTGCCGGGCCAAAGATGGCTGGCTTCAATACCAAAGAGCCAAAGAAATCGAATAAGACGAGGGGCGTTAAGCTGAATTACGACTTCGATCCATTGGCTAAGTATATCTGTCACAATTGTGGAAGGGGCGACACCGAGGAGAGCATGTTGCTGTGCGACGGTTGTGACGACAGTTACCACACCTTCTGCCTGATGCCGCCATTAACGGAAATACCGAAAGGCGACTGGAGGTGTCCAAAATGTGTTGCTGAGGAAGTTTCCAAACCTATGGAGGCTTTTGGATTTGAGCAAGCACAGAGGGAATACACTCTGCAGCAGTTTGGGGAAATGGCTGATCAGTTTAAGAGTGACTACTTTAATATGCCAGTCCATATGGTCCCAACACCTCTGGTGGAAAAGGAATTTTGGCGTATTGTCTCCTCCATAGATGAGGATGTAACGGTAGAATATGGCGCAGATTTACATACAATGGATCACGGCTCAGGATTCCCTACGAAAACTAGCGTCAATCTGTTCACTTGCGACCAAGAATACGCCGAGTCCTCTTGGAATTTGAATAATCTACCAGTGCTACACGGTAGCGTCCTGGGACACATAAACGCAGATATAAGTGGAATGAAGGTTCCATGGATGTACGTGGGGATGTGCTTCGCCACTTTCTGTTGGCACAACGAAGATCACTGGAGTTACTCTATTAATTATCTGCACTGGGGCGAGCCGAAAACCTGGTATGGAGTTCCTGGGTCTCAGGCGGAGCGTTTTGAGCACTCCATGAAATCTGCCGCACCGGAACTATTTCATAGTCAACCAGATCTTCTTCATCAGTTGGTCACTATCATGAATCCCAATATTCTCATGAGAGAAGgcGTTCCAGTCTTCAGGACTGATCAACATGCTGGGGAATTTGTCATTACGTTTCCTAGGGCTTATCATGCCGGGTTTAATCAAGGGTACAATTTTGCTGAAGCAGTCAACTTCGCACCTGCTGATTGGTTAAAAGTTGGCAGAGATTGCATAAGTCACTACTCGAATCTCAGACGTTTTTGTGTATTCTCCCATGATGAACTGGTGTGCAAAATGTCCCTGGATCCCGACTCTCTGGACATCGGTATAGCCACGGCAACATATCACGACATGCTGCAAATGGTAGAAGATGAGAAAAAACTGCGAAAAAATCTTCTGGAATGGGGTGTAACAGAGGCTGAACGAGAAGCCTTTGAGCTTCTGCCAGATGATGAGAGACAGTGCGAAGCCTGCAAGACAACCTGCTTCCTGAGTGCAGTGACCTGCTCGTGTCACAGTTCTCAACTGGTCTGTCTGCGGCACTTCACAGAACTTTGTGACTGTCTACCAGAAAAGCACACATTACGTTATCGTTACACATTGGATGAGCTTCCAATCATGCTGCAGAAACTCAAACTCAAGGCGGAGTCCTTTGACTCCTGGGTGAGCAAAGTCAAGGAGGCTATGGATCCCAAGGGTGACAAGATAGAACTAAATGAACTCAAAGATCTTCTTAATGAGGCCGAGACAAAGAAGTTTCCTGACAGTGAACTTCTGACCGCTCTGACAACAGCTGTTCAGGATGCTGAAAAGTGTGCTAGTGTTGCTCAACAATTGTTAAATAACAAACAACGCACAAGAACAAGACAATCCGTGGATACAAAGTACAAACTGACCGTCGAAGAGCTGACCCTGTTTTACAAAGAGATTACGAATCTCTGTTGTGAACTCAAGGAATCTGATGGTGTTAAATACATCTTGGATCAAGTGCTCCAGTTCCAGAAGGACGCAGAGGAGCTCGAGGCCAAGGAAGATGACTGTGACCTGGAAAAGTTAGAAAAGTGCATAGACTTTGGTGATTCCATTTGCATTGAACTACCACAATTGGTTCGTCTTAAACAGAGATTAACACAGATTCAGTGGCTCGAAGAAGTTAAGTCTATCCAGGAAGAACCAAAATCAGCAAGTCGTGAGGATCTCGTTAAACTCATAGAGAAGGGTATGAACATCCCACCTCATTTCAGCATTGAAAACACTCTATCAAAGTTGCAGTTGTTGATGTTGAGTATTGAAAAGTGGGAAGAGAAGGCGAAGTTGTACCTGGACACAAAAAACAGACAGACTATAGCAGCTGTTGAAGATTTCGTCAATGAGGCGGACTCCATCGATGCTTATTTACCTAGCTTGGACGATCTGCAAGATATATTGACAAAGGCAAAGACCTGGACAAAGACTGTGGAGGACATACAGGCGCGTGACAACTATCCTTACTACGATACGCTGGACGATTTGGTGCGCAGGGGTAGGAATATACCTCTTCACCTAGACGCTCTACCTTTGCTAGAGTCTACTCTCTCCCAGGCGAAGGCGTGGAAAGAGAGAACGGCCAGAACGTTCCTTAGGAAGAATTCTCATTACACGCTCATGGAGGCTCTTTCGCCAAGGATCGGCGTCGGCGTTCAGGCGATGAAGACAAAACGAAACAAGGGTGACGAGTCCGTCGGCGCCGTTTTCGTCTGTGACACAAAGCTCGACGACAGTAACGACTCAGCCAACGTTGTTGCCGCATTTAAACTTGCTGAACAACGCGAGATGGAGGCCATGCGGAATCTTAGAGAGAGGAACTTGATGAAGACTGACATGGAGGATTCCCGGTATTGCGTTTGCCGTAGACCCAGGTTCGGTCTTATGTTACAGTGCGAACTGTGCAAGGACTGGTTTCACTCAAATTGTGTGCCTCTTCCTAAGACCACGTACAAAGGAAAGATACCCACATCGCGTGAAACCAAATTTCTCTGTCCCTGCTGCCTGCGCTCCAGGAGGCCACGTCTAGAGACTATTCTGGCACTCTTGGTGAGCCTGCAGAAGATTCCAGTGCGTCTACCCGAAGGCGAAGCTCTGCAGTGCCTTACGGAGCGTGCCATGAACTGGCAGGATCGTGCTAGACAAGCGCTCAGTACAGATGAACTATCCTCTGCCCTGGCGAAGCTCTCCGTTCTTTCACAGAAACTTGTGGAAGCTGCGGCCAGGGAGAAAACGGAGAAGATCATAAATAGTGAGCTTAAAAAGGCCGCTAATAATCCAGAATTACATCAAAGGATTCAAGCAATTGCACCCCTCAGTGGTGTTCATTCTGATGACAGTGTACCTAGCACAGCTgatgacgatgatgacgtcGTCACTATTGAAGACGACGAACCTACCTGCAGCACGTTCAACAGTAACGAGCATGCGTATTCCTATGTTTCCAAATTCCAACCCAAATCACAATCACAGGATTCCGAGGCAGCAGTGGTTCTCTCTGAAAGCGCTCGAACGCGTCTCGAGGAGCTCATGATGGAGGGCGATCTCTTGGAAGTCGCATTGGACGAGACACAACACATCTGGCGAATCCTGAGCCACACAAATAGTCCAAGCAGTGTGCGAAAGTATGCAGCCTTCGAGGAAGTTCAGGCGACGTTCAAGCACGACATGAAGGATGTGAAGAAGCGGGGCCGAAAACGTAAGTCCGAGGAATTCGAGCTCTTGAAGAAGCTTGGTCGACAGAAGATGGACGAGAAGAATCTTATGAAGCGTAAGGGATTTGCCAAGGACAAGAAGATCGTCTCCACGGCAGGTCAAGTTAAACGTGGACCACGGAAGCTTAAGCGCAAAGAAGGCGAAGAAATCCCCAAGAAACGTGGCGGCAACAGGAAGAAGACCAAACAGGATACATCCGACGAGGAAGATGATTGTGCAGCTGTCAATTGTTTACGACCAAGCGGTCGTGAGGTCGACTGGGTTCAGTGCGACGGCGGCTGTGAAGGTTGGTTCCACATGCACTGCGTCGGTCTGGATCGGACAGACATAGCTGAAGAGGACGACTACATATGCAGCAACTGCAAGGAGGCAGATCAGAACGCAACGTCCCAGGGATACCACAGCGCGGACACCGATCCCGATATCCAGGAGGCCTCGTCCTATATCATGATCTTCTAA
Protein Sequence
MVSKLDVNIGTEPHLGSHQRAKDMGDRSESDFEFVIPPEAPVFEPSAEEFLDPLGYIAKIRQHAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTSEGGIETVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKILTDIKFEPDSEANEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFTGQEEKQESTVSPIKLEDCKDECESDGDYKDIRERDRNKDRSQDDNDNSKELKKLQFYGAGPKMAGFNTKEPKKSNKTRGVKLNYDFDPLAKYICHNCGRGDTEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTPLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLHGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILMREGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKVGRDCISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFTELCDCLPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGDKIELNELKDLLNEAETKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVLQFQKDAEELEAKEDDCDLEKLEKCIDFGDSICIELPQLVRLKQRLTQIQWLEEVKSIQEEPKSASREDLVKLIEKGMNIPPHFSIENTLSKLQLLMLSIEKWEEKAKLYLDTKNRQTIAAVEDFVNEADSIDAYLPSLDDLQDILTKAKTWTKTVEDIQARDNYPYYDTLDDLVRRGRNIPLHLDALPLLESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKRNKGDESVGAVFVCDTKLDDSNDSANVVAAFKLAEQREMEAMRNLRERNLMKTDMEDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTTYKGKIPTSRETKFLCPCCLRSRRPRLETILALLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALSTDELSSALAKLSVLSQKLVEAAAREKTEKIINSELKKAANNPELHQRIQAIAPLSGVHSDDSVPSTADDDDDVVTIEDDEPTCSTFNSNEHAYSYVSKFQPKSQSQDSEAAVVLSESARTRLEELMMEGDLLEVALDETQHIWRILSHTNSPSSVRKYAAFEEVQATFKHDMKDVKKRGRKRKSEEFELLKKLGRQKMDEKNLMKRKGFAKDKKIVSTAGQVKRGPRKLKRKEGEEIPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCEGWFHMHCVGLDRTDIAEEDDYICSNCKEADQNATSQGYHSADTDPDIQEASSYIMIF