Basic Information

Insect: Cephus fumipennis
Gene Symbol: -
Assembly: GCA_030142355.1
Location: JARQSY010000420.1:1243473-1246269[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0022 0.19 12.6 4.3 2 23 300 321 299 321 0.97

2 8 0.0015 0.13 13.1 1.8 1 23 322 344 322 344 0.98

3 8 0.003 0.27 12.2 1.8 1 23 353 376 353 376 0.91

4 8 0.00039 0.034 15.0 0.5 1 23 406 428 406 428 0.95

5 8 2.8 2.5e+02 2.8 1.2 1 23 434 456 434 456 0.96

6 8 5.5e-05 0.0048 17.7 2.5 1 23 464 486 464 486 0.98

7 8 2.7e-06 0.00024 21.8 2.5 1 23 491 513 491 513 0.97

8 8 0.00094 0.082 13.8 3.6 1 23 534 556 534 556 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0022	0.19	12.6	4.3	2	23	300	321	299	321	0.97
2	8	0.0015	0.13	13.1	1.8	1	23	322	344	322	344	0.98
3	8	0.003	0.27	12.2	1.8	1	23	353	376	353	376	0.91
4	8	0.00039	0.034	15.0	0.5	1	23	406	428	406	428	0.95
5	8	2.8	2.5e+02	2.8	1.2	1	23	434	456	434	456	0.96
6	8	5.5e-05	0.0048	17.7	2.5	1	23	464	486	464	486	0.98
7	8	2.7e-06	0.00024	21.8	2.5	1	23	491	513	491	513	0.97
8	8	0.00094	0.082	13.8	3.6	1	23	534	556	534	556	0.98

Sequence Information

Coding Sequence: ATGAAGGAAATTGCAGCAGGAAAGTGTGCTGTTCCTAACTGTGCCTCTGATCATCGTGATATCACCTGCCACCGATTTCCAAAAGATCCATTGAAAGCAAAACTTTGGAAAGATGCAGTGCAAAATCCATCTATCGATTCTATAGATCatataaaattgaacaaaagtTACTGTGTTTGCAAGcttcatttttcacttgatGATTATTTACTTCATACTAAAAGACCAACATTGAAGTCTACCGCAATACCAAGATTTTTTGTACCAGGAGATAACAAAGATTTCCTGCAATATATTTCAGTGAATGTTGaatttcctaaaaaacgaaaatgtgATGATGCACCCATTCAACACATACCATCAGAAGTTAAGGAACCATTGATtaagcaaataaaattggtGGAAGATACTCACAGTTTAGTAACTCCACCATACAGTCCATCAGCCCAATTAATACCAGCAATAAATGGAAAGGTCAAAGTTGAAAGCACAACTGTAGAAAGAGCACCACTTGATAATGAACAATGTGCCTTTAAACGAATTGGCGTATCAACTTCATTATTCAccaaaaaaatagatataggGAAGAAAGTGTATCGCCTCACAATACGCATTGATAAAACTCGTGCGCGACCGTGtccaaaatcaaagaaaatgaatatgacTCCGCAACCGGAAAacaagatacaagaaaaaatacagaaaacgAATGAATCTCATTCAAGCGATAGATTAACAATACacagagataataaaattcgtcAAAATTCATCTTGCGACATTGCAGGTTGTAAGTTACAAAAAACTCTGCTTAACAAAAAACCTGTATTCAAGTGCGACTGTTGTGCACGATATTACATTGTCAAGAGAAGTACTGGgcagaatgaaaaaaacaagtcCTGTTTTGTTTGTCATTTTGTATTCCCTACGCGACAAGCATTGTGTCTGCACATACGAAAACATTTTACATGTGATATGTGTGGCACGGAATGCGGTACtcaaatatcatttaataagCACGCAAGGCAACATGTAAGTACAGATCCTACATTGCCATACAAGTGTCATAAGTGCCTGGAAATCTTTGAAACAAAGAGCGACGTCAGACAACATAATCTTCTAATGCATTCAGCAGTGAAGTTAGAAAACAAAACTGACATGGACAAAAAACCAATAAACTGGATACATGTCCAACAACGGTATCGCAGACTTGAATTCACGTGCGATCTTTGTCAGAAAACTTTCCAATCATCAAAGCTATTGGATGCGCATCGCGCAGGACATATTGGTACATTAAAATTCACATGTCGGGTCTGCTGCAAAGAGTTTGATAGCGTCGAGGACGTTGATATgcatacaaaaatacatttagaaGTAGTTAAAGAGGAACACAAatgtaatatttgtaaaaaattgtttaaaacgGACAGCCTGCTCAATGAGCATTTACGCGGTCACCTTTCAAGGGCTCATCACTGCCCAATATGTCCCAAAGCATTTATCAATAGGACAACTTTGAGAATTCATCTAAAAACGCACAGTGAAGaTTCTGATCGTAAAGATgatcttaaaaatataaaaactgaaaGAGGTAAAACCTATTGTTGCACATTGTGCAGAGAAGAATTCAACACTTATTCTAACATGTATAGTCATATAATGACTCATTTGGAGAAAATGCATGAGGGCGGCAGTAAAACGAATATTGATGATCTTGCAGATATATTGGATATCGAAGATTCATAG
Protein Sequence: MKEIAAGKCAVPNCASDHRDITCHRFPKDPLKAKLWKDAVQNPSIDSIDHIKLNKSYCVCKLHFSLDDYLLHTKRPTLKSTAIPRFFVPGDNKDFLQYISVNVEFPKKRKCDDAPIQHIPSEVKEPLIKQIKLVEDTHSLVTPPYSPSAQLIPAINGKVKVESTTVERAPLDNEQCAFKRIGVSTSLFTKKIDIGKKVYRLTIRIDKTRARPCPKSKKMNMTPQPENKIQEKIQKTNESHSSDRLTIHRDNKIRQNSSCDIAGCKLQKTLLNKKPVFKCDCCARYYIVKRSTGQNEKNKSCFVCHFVFPTRQALCLHIRKHFTCDMCGTECGTQISFNKHARQHVSTDPTLPYKCHKCLEIFETKSDVRQHNLLMHSAVKLENKTDMDKKPINWIHVQQRYRRLEFTCDLCQKTFQSSKLLDAHRAGHIGTLKFTCRVCCKEFDSVEDVDMHTKIHLEVVKEEHKCNICKKLFKTDSLLNEHLRGHLSRAHHCPICPKAFINRTTLRIHLKTHSEDSDRKDDLKNIKTERGKTYCCTLCREEFNTYSNMYSHIMTHLEKMHEGGSKTNIDDLADILDIEDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00294795;
90% Identity: iTF_00293016;
80% Identity: iTF_00293016;