Basic Information

Insect: Cephus fumipennis
Gene Symbol: Prdm15
Assembly: GCA_030142355.1
Location: JARQSY010000311.1:7678-18966[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2 1.7e+02 3.3 0.3 2 23 241 262 240 262 0.94

2 11 3.6e-05 0.0031 18.2 1.2 2 23 270 292 269 292 0.96

3 11 1.6e-05 0.0014 19.4 0.7 2 23 454 475 453 475 0.97

4 11 0.013 1.2 10.1 0.5 1 20 479 498 479 500 0.94

5 11 8.8e-06 0.00077 20.2 1.6 1 23 508 530 508 530 0.98

6 11 0.021 1.8 9.6 3.9 3 20 536 553 535 555 0.93

7 11 5.1e-05 0.0044 17.8 5.4 1 23 559 581 559 581 0.96

8 11 1.2e-05 0.001 19.8 0.3 3 23 602 622 600 622 0.97

9 11 0.029 2.6 9.1 3.0 1 23 627 649 627 649 0.96

10 11 0.00013 0.011 16.5 0.1 2 23 655 676 654 676 0.96

11 11 6.1 5.4e+02 1.8 2.3 1 8 681 688 681 689 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2	1.7e+02	3.3	0.3	2	23	241	262	240	262	0.94
2	11	3.6e-05	0.0031	18.2	1.2	2	23	270	292	269	292	0.96
3	11	1.6e-05	0.0014	19.4	0.7	2	23	454	475	453	475	0.97
4	11	0.013	1.2	10.1	0.5	1	20	479	498	479	500	0.94
5	11	8.8e-06	0.00077	20.2	1.6	1	23	508	530	508	530	0.98
6	11	0.021	1.8	9.6	3.9	3	20	536	553	535	555	0.93
7	11	5.1e-05	0.0044	17.8	5.4	1	23	559	581	559	581	0.96
8	11	1.2e-05	0.001	19.8	0.3	3	23	602	622	600	622	0.97
9	11	0.029	2.6	9.1	3.0	1	23	627	649	627	649	0.96
10	11	0.00013	0.011	16.5	0.1	2	23	655	676	654	676	0.96
11	11	6.1	5.4e+02	1.8	2.3	1	8	681	688	681	689	0.91

Sequence Information

Coding Sequence: ATGTCGGATGCAGATTTGCTCACCGCTGAATCGAAAAATAGCGGGCTCGAACTTTACTTGTCAGcTTGTAATATTTGTGGTCAGAGTCATGATACACACGATTGCCCTTTTTTACTTGATTTGCATTATGTTACTGATATGCCAGTACTGTCTCGTGCAAGACAAACTCTTCCCAAAGATTTGGAAATTACTCGAATGGCAGATGGTTCAACCACAGTAATCACAAATGTTGATCTTCCAAGAGGCACAACCTTCGGTCCCCTGTGTGCTAAAAGAAACTGGACAATGAATCCACTAACCAATTTTCCAATCAGAGTATTTGGAAATATAGCTGCTGAAACATATCATTTGGATTGCTCAAATGAGAACAATTCCAATTGGATGCGTTTTATTGTTCCTGCATCTAATGCAAAGGAACAAAATCTTATTTGCTATCAGgtgaagcaagatatattttataccgCAATGTGTATGATTCCAAATGGTGAAGAATTGCGGGTTTGGTATGCACCATATTATgcactgaaaatgaaaatgccgTTATACAATCCGGATTTTGCAAACATCAGTGCTACTCTACCAGATTCAGATATGCAGCAAATCGTGAAAGCTAAATCTGATGGAGACCAAATAGGattattaaACAAAGATGTTGCACAAGAATTAGCAGAGACACTGCCAGCTCAACATTTGGGTGCTCGAGATGATAAAGCAACATGGAATTGCAGAATATGTTCAACAGTTATTTGTTCAGTTGTTTTATATGCCAAACATTTAATGGAACATTATAAACCATTACTTGGGGTTTATTGTAATATGtgcaataagaaatttaacaATGTTTCAGCTTTAGAGCGGCATAAAAACATGAAGCACCCAGAGGAAACATCAAACGAAGGAGTTATCGGTATTCCAACTTCTGAAagtcaacaacaacaaaatgcACAGacaatatttcttaatatgAACGATTCCGACGGTCAAACATCAGATGCCATGAGAGacattttagaaaaatttaaagctGGAAAGGCTATAACGGAAAATAGTCTGCATTTGTCTTCATTACCAAATGATAAAGAGCATCATGCTGATCTTCCACTTTTGGATACGAATTCTATAATTGTTAACGATTTACTGCAAAATAATGGATCTCTTATTGAGAATTCTTctctaaaattaattttagaaaatcagTGTCTTAATATGAATCTCGGATTGAATAGTATTGCAGATTCAATGCTATCAGAAAATATATCTGCTGTTGATTCTGTTAAATTTAATGTTGAAGAATTAGCATCGGAGCTTTTGGATATTGTTCCAGATGTTGACAATATTAACAAAAGGATAGATAATTTGGAATGTGACATTTGTgacaaaaagtttgaaaaagtaGATTACCTCTATCGTCATTTAAGAAAACATACTGGCGAATTTATTTGTCCTTCGTGTTTGGCTGTTTTCGCTCGAAAAGAAAATCTGCTTTCACATacgtgtttttcaaaaaaattagacTATCATTATGAGTGCCCATATTGTCAAAAACCATTTAtgttaaaaaagtatttaaagaGACATATGGTGAAACACACAGaaTGGAATAATTGTAGATGGTGCCATCATGCATTTACTTCACAATCGGAATTACAAGAACATAAATGTTTGGCACCAAACCATGTATGTCTGCAGTGTGGAAAACGTTTCGTGCACAGAGCACATTTAAATCGCCACGTCAAGCTTCATAATGATCCAAAACCTGTCACGAAACGAATCAGAAAGAAGCAACCAGATAAACCAGTCATTTGTGAAAAGTGCGGggatgtttttaaaaatccttaCAGTTTAAAACAACATTTACGTTCTCATGGAGAAAGAATGTTTGAATGTGATGTATGTCACAGACGCTTTCATCGTGTAGGAGTATTAAAAGAACATAAAACTATACATCAAAGTGCGCAAATTCCGTGCAATATTTgcgggaaaaaattgaaaagtaaaaaagctTTAGACATTCACATGCTCCTTCATGGGAACAAGAAATATCAGTGTGACAAGTGTGATAAGAAACAGCTCGATGTGTCGGGAGTTAGACAAATTGAGTGCAGTGATTCGGATGTGGGGATAAAATCTTCTCACAGTAGTACACCTCAGCGACATCAgagcttggaaaaaaaaacgtcatcTACACCCGCTAGCACCGAGAGACCATCACGATCGCCATCTCCAGATCGAACACCCGGTAGAGCATTTGCAAGATCATCACCACAGGGCTTCGAAGGGAAGCGGAAGTATCGTACAACACCATTTAATACCACGCGAATTTAA
Protein Sequence: MSDADLLTAESKNSGLELYLSACNICGQSHDTHDCPFLLDLHYVTDMPVLSRARQTLPKDLEITRMADGSTTVITNVDLPRGTTFGPLCAKRNWTMNPLTNFPIRVFGNIAAETYHLDCSNENNSNWMRFIVPASNAKEQNLICYQVKQDIFYTAMCMIPNGEELRVWYAPYYALKMKMPLYNPDFANISATLPDSDMQQIVKAKSDGDQIGLLNKDVAQELAETLPAQHLGARDDKATWNCRICSTVICSVVLYAKHLMEHYKPLLGVYCNMCNKKFNNVSALERHKNMKHPEETSNEGVIGIPTSESQQQQNAQTIFLNMNDSDGQTSDAMRDILEKFKAGKAITENSLHLSSLPNDKEHHADLPLLDTNSIIVNDLLQNNGSLIENSSLKLILENQCLNMNLGLNSIADSMLSENISAVDSVKFNVEELASELLDIVPDVDNINKRIDNLECDICDKKFEKVDYLYRHLRKHTGEFICPSCLAVFARKENLLSHTCFSKKLDYHYECPYCQKPFMLKKYLKRHMVKHTEWNNCRWCHHAFTSQSELQEHKCLAPNHVCLQCGKRFVHRAHLNRHVKLHNDPKPVTKRIRKKQPDKPVICEKCGDVFKNPYSLKQHLRSHGERMFECDVCHRRFHRVGVLKEHKTIHQSAQIPCNICGKKLKSKKALDIHMLLHGNKKYQCDKCDKKQLDVSGVRQIECSDSDVGIKSSHSSTPQRHQSLEKKTSSTPASTERPSRSPSPDRTPGRAFARSSPQGFEGKRKYRTTPFNTTRI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01474190;
90% Identity: iTF_01474955;
80% Identity: -