Cfum012237.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cephus fumipennis
Gene Symbol
-
Assembly
GCA_030142355.1
Location
JARQSY010000808.1:541093-545294[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.35 31 5.7 0.5 1 23 74 96 74 96 0.95
2 13 0.044 3.8 8.5 2.8 1 23 134 157 134 157 0.98
3 13 2e-05 0.0017 19.0 0.5 3 23 165 185 163 185 0.97
4 13 0.001 0.09 13.7 5.3 2 23 192 213 191 213 0.94
5 13 4.7e-06 0.00041 21.0 1.2 1 23 219 241 219 241 0.98
6 13 0.1 8.8 7.4 3.8 1 23 288 310 288 310 0.95
7 13 0.33 29 5.8 0.3 2 19 318 335 317 335 0.80
8 13 4.2e-07 3.7e-05 24.3 2.4 1 23 1065 1087 1065 1087 0.98
9 13 0.00013 0.011 16.5 0.7 1 23 1094 1117 1094 1117 0.95
10 13 8.8e-05 0.0076 17.0 0.1 1 23 1125 1148 1125 1148 0.97
11 13 0.018 1.5 9.8 5.8 5 23 1157 1175 1154 1175 0.96
12 13 0.0023 0.2 12.6 4.1 1 23 1181 1203 1181 1203 0.98
13 13 2.5e-06 0.00022 21.9 1.2 1 23 1209 1231 1209 1231 0.98

Sequence Information

Coding Sequence
ATGTTGTTCGTCAAGATTGAagataatggaaaatatgACAGCCTGAcatcaaaaaGCAAATGGATTATTAGGATTATGAGTAAAATGCTTGCATTCCTACAGAATGTAGAAGGAAACGATTCCAGATCTGAGAATACTGTTGAAATATGTGGTACATCTTTAAAAGCCAATGCAGATCCTGTACAGAATCCTTGTCCATTGGATGTCAAACCCAAAGACTTTATATGCTCAGTTTGCGGTGATTGCTTTGCaggagaaaaacaattttatggACATTTGCAAGCACATACAGGAGAAATATATTGGAAATGCACTCAATGTCCAGAGTCCAATGCTGGTTTCGATTCTCTTTCGAGGCTTAAGATTCATGAGAATGCTTGTCATAATATAGTTAGACCTTTCAAATGCAAGCATTGCGATTTACTTTTTGACCGAGGTTCCCAGCGAGATTATCATATGAGAAGTGTACATTTTGGTGAAAAATCGCAAATATGTCAGATATGTGGTAAAGGATTTTTTCGCAGAAATGATTTACGTACTCATCTGAACATTCATTTAGGTACAAATCTTTGCATTTGCGAAATTTGTGGAAGGAAATTCAATCATGTATCAAATCTCATTAGACACTGCAGAATTCATGCAGgagTGAAACCATATCCTTGCTGTATATGTGGCAAAAGATTCACACAAATTGGTTCTTTGGCAAGGCATAAAAGAATTCACAGTCGAGAACAAGATAGTATTAAAGCTTGCTCAATCAAAAACCAAGAAAACGCGCCTTTTGATCTTAAAAATGCAGTTTCCAACAAACATGATCTGCAAGGTGTGGAGCCAAGTCAGCATAAGCCTAGCAAACGCCAGCACTATTGCAAAATTTGTGGGGAAAGTTTTCAATTCATATTGCTGTTACGACAACATGAAAAACATCACTTGCACAGTGCTGAAGATTTGGAATGTAAAAGTTGTGGAAAGACATTTCAGAAAGTAGAAGAAGTCAAGGAACATTGCTGTCGACCGCTTTCTTCTTGTGATGTTAAAGTcacagaaaaaattgttaagaagctttcgaaattcattagaaagacagaaaatttcaatgacaCAGCTGATGACTCTCACGGCGCTGAAACTATTCTAATACAATTACAGGAtgaaagaatagaaaatacTGCTACTTCTAACATATCAATGAATGAAATCAAAGAACAACCAATCCAAGGACAACCTATGATATACTCAGCATCAGATCAGGTCACCGATTTTAATTCGGAAGAAGCTGAAGAAAtaccaaatgaaatattacaagaGCATTTGATGGAACTTGCTGgcaaaataaatacaataagcATGGCACCAGACCGGGATGCTAGCATCAACATTTCTGAAATACTTGAAACGTACAATTGCGAGGATGTAGAGTTTGGAACTGATAATGATATCAAATCGAAACCAtatgaaatccaaaatattcatgtacaaagtgataacaatttttcaagagaaaataacattatttatatacaaacattAGGCAAGGATGGGTTTGCAATTTTAACTGATCATGAAGGTATAATGAGAAATGTCTCCTTAGACATAGTGCAAGAAGCAAATAATACGAATTATCAAcctaatatagaaaattatcatTCCGATACGTCAGAAgtgcaaatttcaaaaagtactGAACTTCCATCGGTAACGACGCAATTATCATACGTACTAAAAtcatttgatgaaaaattgatcaatcagaattttaattcaaatggATATTGTGCAATTGATTCAATTCCAAAAGTGATGATGTCACAAGAAAAATTGGATTGTAATCCTTTAAATACGGAAACCACAACGAAGATAGATCATTACcagaatttaaaagaaaaaaatcagtttaatatggaaatttgtaattcaaaTACCTTAAAAAACTGCCAGTTGAAAATGCTCGAATTGCAAGATAACTCTAATATGTCACTTGCGCATGGGAATCATGAATGTGCAAATGCTGAGCCGCATTATTTGTCATCTTGTGATGATGACGCAGTATCACAACCATTTTTCCCAAATACTAGCGCAAtggaatcaattaaaattgatgaaCAAGCGCAGAACcttgtcaattttgaaaatattgttttaaatcGGACTGACCCAACGTTGCGTTTAGTCCAATCTGAAACTGGAGAACAGTTTTATGAGTTAATACTAAATGATTTGACagataaaatacaaaactcTCCAAACATTCAAAGTTTACCAGAACCTGATAAAACCGATGGTATGTCAACCTCCTGTgacatatccaaaaatattgaaacaatGAGCAACGATACTTCCAAACAACCTAGTTTACGTTTGGTACAAATGGAAAATGGACAgcagttttttgaaattgtgaGGAACGATTCCTtggaattggaaaattttacatcacCATTGCACGAGTCAGAAACTTTACAAGCAAATAACGCTGAGAATCCCAATGAAGTTAATATCAACTTACAGCcggataattttattgaaacaaataatttaaaacataatgaaaataatcaatatttcttcGTAAATGAAAGTCAGGaagtaaattcaattaatactTTAACAAATGATACAGTTACTGTTCAACATTCGAATTTGGAATTCGTGAAAAGTGATGCGCAgtctgattttcaaaataatgatCAAACAAACTTTACTGATTTTGCAAAAACTCATTTTGACAATAGCGCAGAACACTTTCTCGAGCTTGTACGAAACGTTGACAATGGTCAAGCAACAGTTCCAGAACAAACAGATCGACCTACGCCGATAGTACGACTCATACAAAATGAAGATggcgaacaattttttgagttAATTCACGATTCCTTACAACTCGACAAAAGTCGTCACTTAGAACTACAAAATGAAAGAGTGGATAAAAATTCTTCCGCAAATGTTCAAGACACAAACACATTAAATAATCCAGACtgtaataaatcaaattttttaatttgctttcGAAATAATTTAGAATTCCGACCAATAATGAACATTGATCCAAATACGACAAAGGAACTTACTGGCGACGGTAATGATAAATCAAACACTATCAATTTCTATATAGATTTTAATCCAAACAATACTGCAGCTACAGGAAATATcgtaaaagaacaaaaacaaaaatccaaatccTCCGTAAAGAAGTTTCAGTGTTCTGAATGCAATAAGAGCTTCTCTAGTAGCTACAACTTTAAACAACACATTGGCACACACTTTACAGATCAACAAAAGTTTCAGTGCAAAGAATGTGGAACCCAATTTGCATGGAAATCAACATTGAACAAGCATATGGCATTATATCATAGACCGGATGGGCCACAGAAATTTGTTTGTGAAATTTGCCCGAAAGTATATAACACTCTTTCTCAAGTGAATGAGCATGTGAAAAGGGACCATTTGAAAGAACGGAAGCATGTCTGCCATTGtggtaaatcattttttaagaaattcgacCTAAAAACACATGGAAGAACTCATACTAAGGAGCGGCCTTACGTTTGTCGAGCATGTGGAAAAGGATTTCATCATCAAAGTCATATTATTCGACATGAACGTATACACTCTGGGGAAAGACCATATTCCTGTGATATCTGTCAAAAAACCTTTACACAATTAGGTTCACTGAAGGCGCATAAGCAACGTCATCGTCAGattcaaattgatttattagATTATCGATTAGATGAGGATGATCCATTAGCACTAAATGTGCTGTAG
Protein Sequence
MLFVKIEDNGKYDSLTSKSKWIIRIMSKMLAFLQNVEGNDSRSENTVEICGTSLKANADPVQNPCPLDVKPKDFICSVCGDCFAGEKQFYGHLQAHTGEIYWKCTQCPESNAGFDSLSRLKIHENACHNIVRPFKCKHCDLLFDRGSQRDYHMRSVHFGEKSQICQICGKGFFRRNDLRTHLNIHLGTNLCICEICGRKFNHVSNLIRHCRIHAGVKPYPCCICGKRFTQIGSLARHKRIHSREQDSIKACSIKNQENAPFDLKNAVSNKHDLQGVEPSQHKPSKRQHYCKICGESFQFILLLRQHEKHHLHSAEDLECKSCGKTFQKVEEVKEHCCRPLSSCDVKVTEKIVKKLSKFIRKTENFNDTADDSHGAETILIQLQDERIENTATSNISMNEIKEQPIQGQPMIYSASDQVTDFNSEEAEEIPNEILQEHLMELAGKINTISMAPDRDASINISEILETYNCEDVEFGTDNDIKSKPYEIQNIHVQSDNNFSRENNIIYIQTLGKDGFAILTDHEGIMRNVSLDIVQEANNTNYQPNIENYHSDTSEVQISKSTELPSVTTQLSYVLKSFDEKLINQNFNSNGYCAIDSIPKVMMSQEKLDCNPLNTETTTKIDHYQNLKEKNQFNMEICNSNTLKNCQLKMLELQDNSNMSLAHGNHECANAEPHYLSSCDDDAVSQPFFPNTSAMESIKIDEQAQNLVNFENIVLNRTDPTLRLVQSETGEQFYELILNDLTDKIQNSPNIQSLPEPDKTDGMSTSCDISKNIETMSNDTSKQPSLRLVQMENGQQFFEIVRNDSLELENFTSPLHESETLQANNAENPNEVNINLQPDNFIETNNLKHNENNQYFFVNESQEVNSINTLTNDTVTVQHSNLEFVKSDAQSDFQNNDQTNFTDFAKTHFDNSAEHFLELVRNVDNGQATVPEQTDRPTPIVRLIQNEDGEQFFELIHDSLQLDKSRHLELQNERVDKNSSANVQDTNTLNNPDCNKSNFLICFRNNLEFRPIMNIDPNTTKELTGDGNDKSNTINFYIDFNPNNTAATGNIVKEQKQKSKSSVKKFQCSECNKSFSSSYNFKQHIGTHFTDQQKFQCKECGTQFAWKSTLNKHMALYHRPDGPQKFVCEICPKVYNTLSQVNEHVKRDHLKERKHVCHCGKSFFKKFDLKTHGRTHTKERPYVCRACGKGFHHQSHIIRHERIHSGERPYSCDICQKTFTQLGSLKAHKQRHRQIQIDLLDYRLDEDDPLALNVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00293926;
90% Identity
iTF_00254534;
80% Identity
-