Basic Information

Insect: Cephus fumipennis
Gene Symbol: -
Assembly: GCA_030142355.1
Location: JARQSY010000477.1:98138-100018[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0056 0.49 11.3 1.3 1 23 85 107 85 107 0.97

2 12 0.0093 0.82 10.6 0.9 1 23 279 301 279 301 0.99

3 12 0.022 1.9 9.5 0.7 2 23 315 337 314 337 0.94

4 12 0.001 0.091 13.6 7.0 2 23 344 365 343 365 0.97

5 12 0.00064 0.056 14.3 1.9 1 23 374 397 374 397 0.98

6 12 0.031 2.7 9.0 2.1 1 23 412 435 412 435 0.94

7 12 1.7e-06 0.00015 22.4 1.3 1 23 441 464 441 464 0.96

8 12 0.016 1.4 9.9 0.8 3 23 471 492 469 492 0.94

9 12 0.0017 0.15 13.0 0.2 1 23 497 520 497 520 0.97

10 12 2.3e-08 2e-06 28.3 0.4 2 23 527 548 526 548 0.97

11 12 6.9e-07 6e-05 23.7 0.4 1 23 554 576 554 576 0.97

12 12 4.8e-07 4.2e-05 24.1 0.1 1 23 582 604 582 604 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0056	0.49	11.3	1.3	1	23	85	107	85	107	0.97
2	12	0.0093	0.82	10.6	0.9	1	23	279	301	279	301	0.99
3	12	0.022	1.9	9.5	0.7	2	23	315	337	314	337	0.94
4	12	0.001	0.091	13.6	7.0	2	23	344	365	343	365	0.97
5	12	0.00064	0.056	14.3	1.9	1	23	374	397	374	397	0.98
6	12	0.031	2.7	9.0	2.1	1	23	412	435	412	435	0.94
7	12	1.7e-06	0.00015	22.4	1.3	1	23	441	464	441	464	0.96
8	12	0.016	1.4	9.9	0.8	3	23	471	492	469	492	0.94
9	12	0.0017	0.15	13.0	0.2	1	23	497	520	497	520	0.97
10	12	2.3e-08	2e-06	28.3	0.4	2	23	527	548	526	548	0.97
11	12	6.9e-07	6e-05	23.7	0.4	1	23	554	576	554	576	0.97
12	12	4.8e-07	4.2e-05	24.1	0.1	1	23	582	604	582	604	0.98

Sequence Information

Coding Sequence: ATGAGACTGTGGCAGCTCTCTGACTCCCATGGGAATCTCCGTTATTCGCTCGTCCCGGTATCGGATGACTCTTCAGGAAGGGCCAGCAGGCAGCAGGAGCTCATAGTGTCTAGCAACATCAAGGTCGAGGTGGCCGAAGAGTTCGTTGGAGTTGGTGGGACGGCAGGAAAGGCTGAGCAGGCTGAACTCTCTAGCGAGGAGAGTCGTTACTTGGGCTCACTTGCTCATCTTTGCGAAGTGGCCATCGAGTGCTTCTCTTGCGACACGTGCACTATGAAGTTTCCCGTAGAGAGTATGTTGCTCAGACATAAGTTTCGCCACAGACGAAATTTTCGAACAAGACGACTGTTCGTGcggaataagaaaatttctttgtccCAAAATTTACGGGGCAGTTCCAGCGACGCTCGTTCGCCAAACGATCCCATCTACATGTGTCGGCTCTGCAGCTTCCGCTGCGACAGGCGAGTCATTCTGAGCTCACACGTCGCAGCGAAGCATTCCTCCGCTCGGCTGGAGAAGGAAGTGCCGGCTTCTCGTACCTGCCCCGACTGGGAATCAAAGACCATGAAGACAACCAACAGACGGCAGAGTTCTAAGCGGGTGGCTTTGGTAcgggggaaaaagaaaggggaaacGCGCCAAGTACCGGAAGAGAAGACCAAGTGCTGCGGCGACAGTGTCAATGTTGACGATAACGATGAGAACGATGCACAGAGTGTAGACGGTAGTACGGAAGAAGGGAGAGAGGAAGCCGAGGAAAAAGACGAGGACAAAGTCGAAGGGGAAGATGATGGCGAAAGTAGGACGGGACTGAAGCAGGCTGAGAGGAATTACCGTTGCGACGTGTGCTCGTTCGAAACCAGCCGAAATGATATATATCAGAAACACTTGAGGATACACAAGCGACGGCACCGATCGAGCCCCCGAGGGATGATTTTATCTTGTGCCCGCTGCGATTTTCGGTGCAAGAACGCCCCCAACCTGGATGCCCACATCGCCCGAAAGCACGACGCCAACGAGCAGTGCCAATGCAACATTTGCGACTTCAAGTGCGCGAAGAAGAGCACTTTGTACTCGCACATGAGGAGGCATCGGATCCAGGAACTCGGAAACATGTACTCGTGCAACGAGTGCGGCTTCAAGACCGGGAACAAGACCAGCCTCTATTCGCACATTAAGCGGAAACACAAGTCGGCTCGTTCGGCGTCAGGCGCCAAGGCGcccgaatttttcttttgcaatcAGTGCGACtacaagaataaaaacaagTACGAACTGAAGGTTCACGTTGCACGCAAGCACACCGACGACTTCAAGTTTTCGTGCGAAACATGTGGCAAAAAGTTCAAGGTAAAGGGAGATCTAACCAATCACATTAGGTTCACTCACAAGGAGCAACCTGTAATCTGTGATGTTTGCGGCAAGACCTGCCTCAACAGCAACTCCTTGTATGTACATCAGAAATTCGCCCACTACAAGGCCAAGTACGAGTGCGGCATCTGTAAGCGACGCATGGTGAGTCAAGAGAATCTGGACGAGCACATGCTGCGTCAACACGAGAAGCGGGAAAACGTCGTGTGCGAGGAGTGCGGCAAGACTTTTTCGCGGAACAGTCGGCTAAAGGTGCACATGAGGATTCATACTGGCGACAAGCCCTACGCCTGCACGATCTGCAACAAGTCCTTTGCTCGGCGCACTGCCCTTAAGCAGCACCTACTCATACACACGGGAGTGAGACCTTACGTGTGCGACATTTGCGGCAAGGCCTTCACGCAAAAACCCGGACTCATCAGCCACCGGAAGTCTCATCCTGGATCTCATCCGCCACTTCCGAGGGTTCTAATAGACCACATTCTCAATGACGTCATGAACAATTAA
Protein Sequence: MRLWQLSDSHGNLRYSLVPVSDDSSGRASRQQELIVSSNIKVEVAEEFVGVGGTAGKAEQAELSSEESRYLGSLAHLCEVAIECFSCDTCTMKFPVESMLLRHKFRHRRNFRTRRLFVRNKKISLSQNLRGSSSDARSPNDPIYMCRLCSFRCDRRVILSSHVAAKHSSARLEKEVPASRTCPDWESKTMKTTNRRQSSKRVALVRGKKKGETRQVPEEKTKCCGDSVNVDDNDENDAQSVDGSTEEGREEAEEKDEDKVEGEDDGESRTGLKQAERNYRCDVCSFETSRNDIYQKHLRIHKRRHRSSPRGMILSCARCDFRCKNAPNLDAHIARKHDANEQCQCNICDFKCAKKSTLYSHMRRHRIQELGNMYSCNECGFKTGNKTSLYSHIKRKHKSARSASGAKAPEFFFCNQCDYKNKNKYELKVHVARKHTDDFKFSCETCGKKFKVKGDLTNHIRFTHKEQPVICDVCGKTCLNSNSLYVHQKFAHYKAKYECGICKRRMVSQENLDEHMLRQHEKRENVVCEECGKTFSRNSRLKVHMRIHTGDKPYACTICNKSFARRTALKQHLLIHTGVRPYVCDICGKAFTQKPGLISHRKSHPGSHPPLPRVLIDHILNDVMNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01473369;
90% Identity: iTF_00254548;
80% Identity: -