Cfum007297.3
Basic Information
- Insect
- Cephus fumipennis
- Gene Symbol
- Znf335
- Assembly
- GCA_030142355.1
- Location
- JARQSY010000490.1:1271730-1275579[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.036 3.1 8.8 3.7 1 23 400 422 400 422 0.93 2 21 0.0068 0.6 11.1 0.2 1 20 430 449 430 450 0.96 3 21 0.00075 0.065 14.1 0.7 1 23 459 481 459 481 0.98 4 21 6.8 6e+02 1.6 0.1 2 23 508 529 507 529 0.78 5 21 0.047 4.1 8.4 0.8 1 23 537 560 537 560 0.92 6 21 0.0044 0.38 11.7 0.8 2 23 567 590 566 590 0.87 7 21 1.5 1.4e+02 3.7 0.2 2 23 623 644 622 644 0.91 8 21 0.14 12 6.9 0.6 2 23 653 675 652 675 0.93 9 21 0.00081 0.071 14.0 2.2 1 22 681 702 681 705 0.91 10 21 0.00031 0.027 15.3 6.5 1 23 789 811 789 811 0.98 11 21 0.0035 0.31 12.0 0.2 1 23 818 841 818 841 0.95 12 21 0.0001 0.0089 16.8 2.1 1 23 847 869 847 869 0.98 13 21 0.0007 0.061 14.2 2.1 1 23 875 897 875 897 0.97 14 21 2.2e-05 0.0019 18.9 0.8 1 23 903 925 903 925 0.97 15 21 0.14 12 6.9 1.0 1 23 938 961 938 961 0.96 16 21 0.00015 0.013 16.3 3.9 1 23 977 1000 977 1000 0.96 17 21 0.0012 0.1 13.5 1.3 1 23 1008 1031 1008 1031 0.96 18 21 5.8e-05 0.0051 17.6 1.6 1 23 1037 1059 1037 1059 0.98 19 21 0.0073 0.64 11.0 6.9 1 23 1065 1087 1065 1087 0.98 20 21 0.00013 0.011 16.5 3.1 1 23 1093 1116 1093 1116 0.98 21 21 0.23 20 6.3 5.4 1 23 1122 1144 1122 1144 0.97
Sequence Information
- Coding Sequence
- ATGAATTCTACAAAAACGTTCATTGTGAAGGTAGAGAATTCACATATTACATTATCAGTAACAGACACATTTAAAGACCTGCAGATGAAGTTGAAAGAACATGGGATAGATGTAAACATAGCGTCGATGCTAATTAAAGGAAGAATGGTAAATGAGTCTTCTGTCGTATCAGAGTGCCTTAGTGTcgaaagtaAGGATGTAGAGGATGAGACTGTAGAATTTGTATTACCAGATTTATCTGAAATGTCAGAAACAGAAATGATTTCTGATCAAGatGTCGAGACTCAAAAGATTAAGTATTCATTATGTCGATTATGTGGCATGACGACAGAAGACCCAgttgatatttttgaagaatcaaatattacagaaacaataaacaaattattaccGATATCTATATGTCAACAAGAAACACTATCACGATACATATGCAGCCCATgccataagaaaattattttcattcaggattttgttttactctgtatagaaaatgaaaaaaaattgtcaaaccTAACTACTTCAACAGACCAATCtattgaaattccaatgaATGACAATACAGAAGCtgcaaaaatattgcaaatacatgacaaaacaaataaatatagatgTCCCAATTGCAAAGTAAATCTAATCATCTCCAAAGATGTTCAATCGGAAAATTTTGATAGTGCCTTTCAAATAACTTTAAATTCAACAGATAGTACAGATGAATCTGAGATAAATGCAGAgctaaagaaacaaaaaacggATGTCGTATCAAGGAAAGGTACACACAAAGGAATAAGTACCAGATCGGTAAGAAATTTACGATCATCTTccaatttacttaaaaaaagtaatacagtTAGTGCAAGACATACGAGGAGACAAACACGGAATATATCTAGACTTACAAAATCAAATACTACAGAGAACcatgcaaaaaatatacataacagtttaaataaaaaatcttctcGAGGAAAGAGTAAAACTAATTTGCGAGATATCAGAAAGAGAATAGTGAATAGTGATCATGACAATGAAAAACATACACAGTCAccaaagaggagaaaaatggTTTCTGAGACCacagaaaatacttttcttacAATTGATCCGAATTTGGATGTTTCTGATATTACCAGTGAATTCGTTGATTTTGATACTCTGGAGGAAAGTAATGACGAGAGTATAAAAAGGCCAATGAAACATAAATGCGATATatgtgatataaaattttcttcggaAGATCATTATCGATTTCATGTGGATCGACACGAGACGGGATGTTTCGATGACTTCAAATGCTCTACATGTAAGAAAGAATTATCCTCCGAGGATAGCTTATGGGAACATCAAGAATGCTGTGAAATAGGTCTTGAATACTATAGTTGTACATTATGCCAGAAAACGTTccttgaaaaagaattattaaatgatcatATGCAAATTCACGATGAAGAAGATACAAAATCTCTTAATACAGATACGGATACAGTTCCAtcagaaaatggaaaaaaatcaactaaATTAACATGTGAAGTATGTGGAGCGCGCTATGTATTACGGGAAcgatatgaatttcatatagaAAGGCATAATTTTGGAAACATCAAGACTTTTTCATGTctaatttgtgaaaaaagatttaagAGTGAAAACATTCTGTGGGATCATTACCAATATCAACATAGAGCAGGTGAGAAATTCGCTTGTATAACTTGTGAGAAAACATTTGTCAAACGAGCAAACTTGAATTATCACTTAAAAACATTTGGCCACAAGGgtggaaaattcgtaaacaGCATAGAGCATAATCAAAGCACCGACTCCAGTAACGTGAAACTGTCTGATGTTGGTAAACCACGACCTAAGATAACTTGTTTAGAATGCGGAGCTCGTTTTGTTTTACAAGAAAGATATGAATTCCATATGGAAAGACATAAATCTGGAAAAATGGATGCTTGCGTGTGCAATCTGTGCGGTAGAGAAtcaacaaatgaaaatgttttgtgGGATCATTATCAGTATATGCACAAACGCACGAAACGTTATGTTTGTACTACAtgtggaaaattatttcacaaacAGTCAATGTTGAGTAGGCATCAAGTCAAATACGGTCACAAAGGtacaaaagaaatagataTCGAAACGGATGGCAATGCTATAACAATAGACAGTGCTGCTTTTAAAAAGGTGATAGctgaagaaataatagaaatgaaatccGTAAATTGCGTACTCTGTGGAGAAGTAGTATGGGGTGTAGACCCAAATTTGATAAACGATGCTGTTACCTGTTCGAATTGTGAGAGACCTGGACTGTCTTTGCAAGTAGATTCCGACGGTGCTAAGGTAATATCACGTCGTCAGTACCATTGCAACATGTGTAACAAACATTTTACAACAAAAGATCGCCTAGAGTATCACATAATGCGCCACTCGGAAAATATGGAGGAATTTGTATGTAGTACTTGTGGAAAGGAACTCAGTACTGAACAAGCTTTGTTCGAGCATTACTTATATGTGCACAAAGGTGCAAGACCACACGTTTGTGAGCTTTGTGGAAAATCTTATCAATTCAAAGCTCGGTTAAAGGAGCATATGAGAAGTCATAGTGGAGAACGACCATTCGCCTGTGAAATATGTGGTCAACGATGTATGACGAATAATGCGCTACGCTCTCACAAAAAAACTCATATCACAGAGAAGCGATTTCCGTGTCAGATATGTAAGAAGGCATTCAGAAAAAGGCAGGATTTGAACGAACACTTAGAGAGACACTGGAAGAATGACAAGACGATGACGTTACCACAAGTGTTTAGTTGTTCTATTTGTATGGAGATGTTTCCGACTTTTCGGATTCTGAAAAAGCACATGAAAGAGACTCACAGCGTGGAGAGTCAGGATCCTATATTGACTGAATTGCAACCATGGTTTGAGTGCGAAGACTGTCACGAGAAGTTCAAGCATCAAATGTCTTTGAAAGTTCATCGTGAGAGGGTTCACGAGGGTAAAATGAAGCCCGTTTATCATTGCGATATATGTGACATCACATATAAGAATGCACGGGTACTCTCGAATCACATTAAGAATAAACACGAGGGTGGTAAACGGTATAAATGTGCTCAATGCGGTAAAGAGTACAATCAGTCTACGTCTTTAcataatcatattttattgcatactGGAGAAAAGCCGTTCAGTTGTGAACATTGCGAAATGACGTTTCGCACTAAGGAATCCCGTGATCATCATCAACGAAAACATACTGGAGAACGTCCTTATAAATGTCCACATTGTGACAAAGCATTCGCTACTACAACTCAACGTCGAGAGCATCGAAAACGAGAACACGATGAAGGCAATAATCATCATTGTCCGGAATGTGGGAAAATATGTTTTGGTGAACATGGCGTTAGAAGTCATTTAAACACTCATATGGCCGAGAAACAGCAGTCACAGAATGATATTACATAA
- Protein Sequence
- MNSTKTFIVKVENSHITLSVTDTFKDLQMKLKEHGIDVNIASMLIKGRMVNESSVVSECLSVESKDVEDETVEFVLPDLSEMSETEMISDQDVETQKIKYSLCRLCGMTTEDPVDIFEESNITETINKLLPISICQQETLSRYICSPCHKKIIFIQDFVLLCIENEKKLSNLTTSTDQSIEIPMNDNTEAAKILQIHDKTNKYRCPNCKVNLIISKDVQSENFDSAFQITLNSTDSTDESEINAELKKQKTDVVSRKGTHKGISTRSVRNLRSSSNLLKKSNTVSARHTRRQTRNISRLTKSNTTENHAKNIHNSLNKKSSRGKSKTNLRDIRKRIVNSDHDNEKHTQSPKRRKMVSETTENTFLTIDPNLDVSDITSEFVDFDTLEESNDESIKRPMKHKCDICDIKFSSEDHYRFHVDRHETGCFDDFKCSTCKKELSSEDSLWEHQECCEIGLEYYSCTLCQKTFLEKELLNDHMQIHDEEDTKSLNTDTDTVPSENGKKSTKLTCEVCGARYVLRERYEFHIERHNFGNIKTFSCLICEKRFKSENILWDHYQYQHRAGEKFACITCEKTFVKRANLNYHLKTFGHKGGKFVNSIEHNQSTDSSNVKLSDVGKPRPKITCLECGARFVLQERYEFHMERHKSGKMDACVCNLCGRESTNENVLWDHYQYMHKRTKRYVCTTCGKLFHKQSMLSRHQVKYGHKGTKEIDIETDGNAITIDSAAFKKVIAEEIIEMKSVNCVLCGEVVWGVDPNLINDAVTCSNCERPGLSLQVDSDGAKVISRRQYHCNMCNKHFTTKDRLEYHIMRHSENMEEFVCSTCGKELSTEQALFEHYLYVHKGARPHVCELCGKSYQFKARLKEHMRSHSGERPFACEICGQRCMTNNALRSHKKTHITEKRFPCQICKKAFRKRQDLNEHLERHWKNDKTMTLPQVFSCSICMEMFPTFRILKKHMKETHSVESQDPILTELQPWFECEDCHEKFKHQMSLKVHRERVHEGKMKPVYHCDICDITYKNARVLSNHIKNKHEGGKRYKCAQCGKEYNQSTSLHNHILLHTGEKPFSCEHCEMTFRTKESRDHHQRKHTGERPYKCPHCDKAFATTTQRREHRKREHDEGNNHHCPECGKICFGEHGVRSHLNTHMAEKQQSQNDIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00293924;
- 90% Identity
- iTF_00293924;
- 80% Identity
- -