Basic Information

Gene Symbol
-
Assembly
GCA_030142355.1
Location
JARQSY010000434.1:1681831-1682481[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.4e-07 0.00045 20.6 0.0 3 39 21 58 19 59 0.96
2 2 0.87 8.9e+02 0.5 0.0 8 20 98 110 98 113 0.85

Sequence Information

Coding Sequence
atgactagcaagaaaaagtcaaacaaATTGTCGAATGCAACGGACGACACTGCTACAGTAGTATGGACAAAGGCAGAGAAATTTGCTCTtttgaaatctttgaaaaaatacggTCATAAggacatttcaaaaattgcagAGACAATACCAAGTAAATCACAAagtgatataaaaatgttgattgataaatttacaaagCAAGCCCGTTGCAAGAAACATATAAAAACTGAATCACCAATTGATAACTGGTTAGCAAGTGGTATGTTTCCTGATACTGATACTCTTATACCTGAAGCATTGTTGTTTATACAGTTGTATGAGAAGCATCCACCAGAAGAGCAAACTGCTGGATGTAATTTAAGGGAAGTATACAACTTTTTGTATAGGATGGTGCTTGGACAACCCACCATTGGTATCTCTCCTGAAGTAGAAAagactgtatattttttaatatcaaatattactAGAGAAGTATGGCCTGCCTCTCGGGCTGAAATCTTAAATGAAATTGCTAAACTACCTgctaaacaaaaatgtttaaaagtGTATCCTGctaaaaaaacgtatttttaa
Protein Sequence
MTSKKKSNKLSNATDDTATVVWTKAEKFALLKSLKKYGHKDISKIAETIPSKSQSDIKMLIDKFTKQARCKKHIKTESPIDNWLASGMFPDTDTLIPEALLFIQLYEKHPPEEQTAGCNLREVYNFLYRMVLGQPTIGISPEVEKTVYFLISNITREVWPASRAEILNEIAKLPAKQKCLKVYPAKKTYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00296717;
90% Identity
iTF_00255023;
80% Identity
-