Basic Information

Insect: Cephus cinctus
Gene Symbol: -
Assembly: GCA_000341935.1
Location: NW:44278-56328[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.81 49 4.0 0.1 1 23 116 141 116 141 0.95

2 17 0.042 2.6 8.0 5.6 1 23 148 171 148 171 0.97

3 17 0.017 1 9.3 0.6 2 23 187 208 186 209 0.95

4 17 3.8 2.3e+02 1.9 3.7 1 23 215 237 215 237 0.97

5 17 0.024 1.4 8.8 0.5 2 23 243 264 242 264 0.97

6 17 6.6 4e+02 1.1 1.1 2 23 652 673 651 673 0.94

7 17 0.048 2.9 7.9 0.1 1 23 688 710 688 710 0.94

8 17 0.011 0.68 9.8 0.3 1 23 718 740 718 740 0.98

9 17 0.13 8 6.5 2.3 2 23 836 857 835 857 0.96

10 17 8.8 5.3e+02 0.7 0.3 3 23 869 889 867 889 0.90

11 17 0.0022 0.13 12.1 0.2 1 23 966 988 966 988 0.98

12 17 0.025 1.5 8.8 0.3 1 23 1063 1085 1063 1085 0.97

13 17 3.6e-05 0.0021 17.7 0.6 1 23 1091 1113 1091 1113 0.97

14 17 0.0043 0.26 11.1 2.6 1 23 1162 1184 1162 1184 0.97

15 17 0.00031 0.019 14.7 1.4 1 23 1190 1212 1190 1212 0.99

16 17 0.084 5 7.1 0.2 2 23 1307 1328 1306 1328 0.97

17 17 2.2 1.3e+02 2.6 0.1 3 23 1337 1357 1336 1357 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.81	49	4.0	0.1	1	23	116	141	116	141	0.95
2	17	0.042	2.6	8.0	5.6	1	23	148	171	148	171	0.97
3	17	0.017	1	9.3	0.6	2	23	187	208	186	209	0.95
4	17	3.8	2.3e+02	1.9	3.7	1	23	215	237	215	237	0.97
5	17	0.024	1.4	8.8	0.5	2	23	243	264	242	264	0.97
6	17	6.6	4e+02	1.1	1.1	2	23	652	673	651	673	0.94
7	17	0.048	2.9	7.9	0.1	1	23	688	710	688	710	0.94
8	17	0.011	0.68	9.8	0.3	1	23	718	740	718	740	0.98
9	17	0.13	8	6.5	2.3	2	23	836	857	835	857	0.96
10	17	8.8	5.3e+02	0.7	0.3	3	23	869	889	867	889	0.90
11	17	0.0022	0.13	12.1	0.2	1	23	966	988	966	988	0.98
12	17	0.025	1.5	8.8	0.3	1	23	1063	1085	1063	1085	0.97
13	17	3.6e-05	0.0021	17.7	0.6	1	23	1091	1113	1091	1113	0.97
14	17	0.0043	0.26	11.1	2.6	1	23	1162	1184	1162	1184	0.97
15	17	0.00031	0.019	14.7	1.4	1	23	1190	1212	1190	1212	0.99
16	17	0.084	5	7.1	0.2	2	23	1307	1328	1306	1328	0.97
17	17	2.2	1.3e+02	2.6	0.1	3	23	1337	1357	1336	1357	0.87

Sequence Information

Coding Sequence: ATGTCAGGACGACTTCCTCGGCTGCGTGCGCTACGTCCGCGACCTCAGCCACATCTTCAGAATACACCAGCACCTACGAGGACTGAGTCTAGATACAataaggaggaggaagaggaaattAATGACGAAGAGGACGAGTTGTTGGTTGAAAATGAGGAGGATATTGAGGGCGGAGTGgatgaggaagaggaggaagaggatgagATTATTGATGAACAGGAACTGGAGGAACAGGAGTCTGTGAATGATGATAGATTTAAGAGTGATGAAAGTGAAAAGAGACTTGTTATTAAAGAGGAACCTGTGGAAATTGTTACTGAGGAACCGGAGGACTCTGAAAGGAATTATGAGTGTAAAACCTGTAACCCACCTAAGGGTTTATCCAATCTAAAGGCTTATCTTGCACATCTTAAGAATGAGCATAAACAAAAGgTCAAGTGCTATGAATGTCCCCACTGTGAATTTGTTTGTCAGCACGTAAAGAAATTACAAAGGCACTTCCGTGTTGCTCATGAGGATCTTCAGGACAAGGTTGCAGCTGAATCCGCGGAAAGAAGTCGCTGTCCAATGTGTGCTCACATTGCAGCCAACCCTCAGGATCTCGAAACCCATCAAAGAGTCCATCATTTGAAACGACGTTTTTTTAGATGCGCCAAGTGTTCCTACGTAACACACGTTCGTGCTCGTTATACAAAACATGTGAAATATCATTCGATGCCAATGATAAAATGCGACGCTTGCGATTTTCGTACTCCATACAAGTGGAATTTGGATCGTCACACACGCAATCATGGCGGAGGTGGAGCCTTTCAATGTAGAGCCTGTAATTTTACAGCAGACATTCGTCAAAGCTTAACAGTACACGAAACCAATCATCATGAACCTCCTGTAGGACGAACTCCTCGCAAGATGAACACACCTTTTGAACGCAAACCTCGTAATAGTCCAAAGCGTTATAACCAGGTGGGTGCAAGTGATTTTCGAGATACAGCGACTGGGTCGAACCACCCGGAAAAACTGAAGTCTGGCAGTCCGGCGAAGTCTTTATCTCCAGACAAAAACCTAAGTTCACCCGAGGACAGAAGAAGTGCCATTGCCGGTGCAGAGTGCATCGCCCTCAAGTGCGAAGAGAAAGGTTGCCAATTCATCACCGCCTGGGATTCGAAGATGCAGCGACACTTAGCAGAATCTCATTCTCAGAACGCGGCAAATAAACCTAAGAAACCATTACCTATGCTAATACCACTGAGTCCCGTAAGCAACGCCAAAGCTAACAATGCTGGAGCCAGTGGTCCGGGTACGACCTTACTGAAGGTTCCCCGGGTGAGAGTAAGACCAGAACTAGCTCGAATCGCACGTGATACAGAAATGGCACGGCTATATGGAAACAAAGAACAGGCGTCCGAGCTGAAGAAGGAGGCTGGTACGACAGATTCCTTTGAGAAAAAGAACGCCTCCTTCTTCGACAAACTGAAGGAGAGACTGATGACGACTTCCGGGAACAATGGGATAGCTGAGGTGGCCATAGAACAGCAGTCGGGAGATGAACGCATTTACGGGGAACGTACTGGTGAAGACCGTACTTCTGATGAACCACCAACTAAAATCCTTATTATGAGTGATACCAAGGAATATCCGCAACCTCCAGAACTTACTCCAGCACCTGTTTCACTCTTAACATCCACAAATTCCTCAAGGGAGATCTCGGCATTACCTTTGCGACCTCCGCCACCCTTAAAGGCTGCTACCCGAAGTCAGGGTCAGTCACTCCTGAAAAATAATCCTGCTGTCTCTAACGCCAATGCGACTGTAACGCCGACTACAGGCGTTAATGCTTCCCTTAGTACAACTGCGGCTGTCACCGCGCTCGCAATAACGCCGGTGACTGCTATGGCACCTTCGAGGTCTTCTCCGCCGGGTTCCGGGTCAGAGGAGAGTAAACGCACTTTGTGGAAGTGCAAACGATGTAATTTTCGCGATTCTAACAAGGAGACTGTGTTAATTCATGTCAAATCTCATTATGAGTCTATGGATGATGTTGCTGAATCTGAAAAGAATGCCTTTACCTGTGAGGATTGTCCTTTCTCAGCTGCTGATGCCGAATCCTTGGCTCTGCATCGTGTACATCATCGACCCAATCTTGAAGCCATATTTAAATGTTATCTCTGTCCATACTATGTTAGCACCAAAGTGGAGCTCTTGGATCATGCTCGATTACATGGAGAGGAATTGGCTGTTGTTCATCAGAGAAATGTAGAATCTGAATCACCACCTTCTAAGCGTAAATATTCTCAGAATCATCGTACAGTTCTAGCGAACAACCAAACTAAAGAGGAATCATCAATGGAACAAGTTATACACATAACATCCCCAAGCACTTCAACTTCAGGTTCAGTTTCATCAAAGGGTAACGAAGCTCCACCTCTTCTCTTGGATACGCGCGCACTTCCTGATGCACCGTTAGTGTGGGTATCGCGAACAGATGGTACGATTGcaaaaatgttaaaatgtCGACACTGTCCGCACGTATCATCACGTCGAGCCGAGGTCCGCGATCACGAGAGTATGCACATGAACTCACCCAACCAGGGTTCTCTCATAGCTTGTCCAAGCTGCAGCTTCGCTTGTTCACGAAGAGAAGTCATGGATTCTCATGCAGAAATGCATTCAGGCGCCCTGGGGACTGTACACTGTCTCGTTGACGAAGGTCGGACTGATGCTCAACAGCTCAACGACCTCTCCACCCTGCTTGGACTTCCTCAACCCATATCCGTGGCTTCGGAACCTGATTTGAGGGATTCCAGGCTGGTTCACTGCTGTAGCAAGTGTCCTGCACGCTTCCTATGCGAGAAGGAGCTCAGAATTCACCTGCGTTATCATTGTACGGAGCTAGCCTATTCATGCCAGTGGTGCTCGTACGCTGCTCGACAACCAGCTCATCTGCTGGCACATCAGAAAGCACATTCACCCGAATACCAGGACCGCACTCGTTACCTACTCTCCCTGTATGGCCACTCGCAGAGATACCCTCCTCCTACGACGGCGTGTGTCGAGGCGAACACTCAGGATTCCGCAGAAGGTAACACTACTAACGTCGCTTGGATCGTCGTCGAGGTAGGGGCAGGACGTAGCAATGTTCTGACTAATCACCTTACTACTAGCAGTCAGGAAACTGGAAACCAAGTGTTCACCTGTGCCAAGTGTCCGGCGCGATACTTTAAACTGGACGCCCTGGAGTATCATATGACTCTTCATGGTACAAACAATAGGTTCAAGTGCACGGAGTGTGATTACTCGTCGAAGACGGCTCAAAATCTGGTGAAGCACCAAGTTGTTCATCGTCGGCACGCCGAAGCTAACGAGAATGTGACCTCTTCCAGACTGCTACCACCACCTGATCCACAGTTTGGCATCCTTATGCGTGGTAATCCTAACTTTGTGTATCCAGGATATCTAAGGAATGGCCGACTTCGGGAGAAACGGTACAAGTGTCACAAATGTCCGTCGGCTTTCGAAAAGCGTGAACAGTATAGGATTCACTTGACGTTACATGGTGCCAAGCAACGATATCGCTGCGATACTTGTGATTATTCGGTCAAATATTACGCGAATTATGCTCAACACTTGAGAAAACACCAGGCCAACGCCCAGGCACAGGCGTCTCGACGACGATACGAGGACGATGCTATAACTATTGACACTGGAATCCAATCTGATAgcactatatctatatctcgCTCTGGCAAATCCTTAACCAAGTCCTCAGCCGGTTTCTCCGCAGCTGGCAATATCTTGGCTAGTGGTAGTGCATCGAATTCTGCCGTGTTGCAAGTTTCTAACCAGGACAAGCAGTCGCTTATGCTCTTACAAAAGAAAGGTGTCCTGGTGGCACCTAGTGAAGTTGAAGCAGAAAATATTCGCTGTCAAGACTGTCCTTTCAGTACTCCTGATAAGGATGTCATGGATGCTCATAAGCGTCGCCATGGTATCGAGAGGATGACACCTCCTTGTCCTCATTGCGACTATGTACCTCGCAAGGATGAAAACGTGGGCGACCATATTCGTCTTCATTTTACCAGGCTCTACAAGCCAGACTCTTACCTCATCGCTGAACTGCTCACCCTGACGATGCGTCGCGTTCCTGCAAACGGCAAAGAGGACGCTAAGGAAAATGAATTGCTGTTCAAGGAATGTGGCGATGGGAGATTTCTACCAATAGTTGACCCGACTACGTCCTCCAGGTCTTTATCTCCTAATGAAAACAGTGTGCAAGAGAAAGTCATAGTGGATCCTAACACAGGTGAAGCCAAGCACCATCTCACTgtataa
Protein Sequence: MSGRLPRLRALRPRPQPHLQNTPAPTRTESRYNKEEEEEINDEEDELLVENEEDIEGGVDEEEEEEDEIIDEQELEEQESVNDDRFKSDESEKRLVIKEEPVEIVTEEPEDSERNYECKTCNPPKGLSNLKAYLAHLKNEHKQKVKCYECPHCEFVCQHVKKLQRHFRVAHEDLQDKVAAESAERSRCPMCAHIAANPQDLETHQRVHHLKRRFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVGRTPRKMNTPFERKPRNSPKRYNQVGASDFRDTATGSNHPEKLKSGSPAKSLSPDKNLSSPEDRRSAIAGAECIALKCEEKGCQFITAWDSKMQRHLAESHSQNAANKPKKPLPMLIPLSPVSNAKANNAGASGPGTTLLKVPRVRVRPELARIARDTEMARLYGNKEQASELKKEAGTTDSFEKKNASFFDKLKERLMTTSGNNGIAEVAIEQQSGDERIYGERTGEDRTSDEPPTKILIMSDTKEYPQPPELTPAPVSLLTSTNSSREISALPLRPPPPLKAATRSQGQSLLKNNPAVSNANATVTPTTGVNASLSTTAAVTALAITPVTAMAPSRSSPPGSGSEESKRTLWKCKRCNFRDSNKETVLIHVKSHYESMDDVAESEKNAFTCEDCPFSAADAESLALHRVHHRPNLEAIFKCYLCPYYVSTKVELLDHARLHGEELAVVHQRNVESESPPSKRKYSQNHRTVLANNQTKEESSMEQVIHITSPSTSTSGSVSSKGNEAPPLLLDTRALPDAPLVWVSRTDGTIAKMLKCRHCPHVSSRRAEVRDHESMHMNSPNQGSLIACPSCSFACSRREVMDSHAEMHSGALGTVHCLVDEGRTDAQQLNDLSTLLGLPQPISVASEPDLRDSRLVHCCSKCPARFLCEKELRIHLRYHCTELAYSCQWCSYAARQPAHLLAHQKAHSPEYQDRTRYLLSLYGHSQRYPPPTTACVEANTQDSAEGNTTNVAWIVVEVGAGRSNVLTNHLTTSSQETGNQVFTCAKCPARYFKLDALEYHMTLHGTNNRFKCTECDYSSKTAQNLVKHQVVHRRHAEANENVTSSRLLPPPDPQFGILMRGNPNFVYPGYLRNGRLREKRYKCHKCPSAFEKREQYRIHLTLHGAKQRYRCDTCDYSVKYYANYAQHLRKHQANAQAQASRRRYEDDAITIDTGIQSDSTISISRSGKSLTKSSAGFSAAGNILASGSASNSAVLQVSNQDKQSLMLLQKKGVLVAPSEVEAENIRCQDCPFSTPDKDVMDAHKRRHGIERMTPPCPHCDYVPRKDENVGDHIRLHFTRLYKPDSYLIAELLTLTMRRVPANGKEDAKENELLFKECGDGRFLPIVDPTTSSRSLSPNENSVQEKVIVDPNTGEAKHHLTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01475809;
90% Identity: -
80% Identity: -