Basic Information

Insect: Cephus cinctus
Gene Symbol: RREB1
Assembly: GCA_000341935.1
Location: NW:604326-619922[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00041 0.024 14.4 0.0 1 23 38 60 38 60 0.98

2 15 0.00013 0.0077 15.9 0.3 1 23 74 96 74 96 0.98

3 15 1.7e-07 1e-05 25.0 1.3 1 23 102 125 102 125 0.98

4 15 0.076 4.6 7.2 0.2 1 23 218 242 218 242 0.92

5 15 0.18 11 6.0 5.3 2 23 248 270 248 270 0.95

6 15 0.71 43 4.2 0.3 1 19 326 344 326 346 0.94

7 15 0.14 8.6 6.4 0.1 1 23 460 482 460 482 0.96

8 15 1.2e-05 0.00074 19.1 0.3 1 23 491 513 491 513 0.98

9 15 0.00093 0.056 13.2 2.8 1 23 519 542 519 542 0.97

10 15 0.00034 0.021 14.6 3.0 1 23 928 951 928 951 0.97

11 15 0.00049 0.03 14.1 0.1 3 23 1252 1272 1250 1272 0.97

12 15 0.0031 0.19 11.6 2.2 1 23 1339 1363 1339 1363 0.97

13 15 4.1 2.5e+02 1.8 2.5 1 23 1449 1472 1449 1472 0.86

14 15 0.0084 0.5 10.2 0.4 2 23 1523 1544 1522 1544 0.94

15 15 0.99 60 3.7 8.2 1 23 1550 1572 1550 1572 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00041	0.024	14.4	0.0	1	23	38	60	38	60	0.98
2	15	0.00013	0.0077	15.9	0.3	1	23	74	96	74	96	0.98
3	15	1.7e-07	1e-05	25.0	1.3	1	23	102	125	102	125	0.98
4	15	0.076	4.6	7.2	0.2	1	23	218	242	218	242	0.92
5	15	0.18	11	6.0	5.3	2	23	248	270	248	270	0.95
6	15	0.71	43	4.2	0.3	1	19	326	344	326	346	0.94
7	15	0.14	8.6	6.4	0.1	1	23	460	482	460	482	0.96
8	15	1.2e-05	0.00074	19.1	0.3	1	23	491	513	491	513	0.98
9	15	0.00093	0.056	13.2	2.8	1	23	519	542	519	542	0.97
10	15	0.00034	0.021	14.6	3.0	1	23	928	951	928	951	0.97
11	15	0.00049	0.03	14.1	0.1	3	23	1252	1272	1250	1272	0.97
12	15	0.0031	0.19	11.6	2.2	1	23	1339	1363	1339	1363	0.97
13	15	4.1	2.5e+02	1.8	2.5	1	23	1449	1472	1449	1472	0.86
14	15	0.0084	0.5	10.2	0.4	2	23	1523	1544	1522	1544	0.94
15	15	0.99	60	3.7	8.2	1	23	1550	1572	1550	1572	0.98

Sequence Information

Coding Sequence: ATGGATTACTCTTCGAAAGTGACCGCTGACAGTGGACCGGATCAACGACAGACCAGCGAGACTCAAACGGATGCTGGATCTTCGCCATTGGTCGAGCATCCGGAAGGAACGTATCCTTGTCCTGCATGCCCTACAGTACTCTCGACCTCCAGGGAACTAACGAATCATCTACGTGGTCACAATTCACCACGCAGCACGGACTGCAGCGGCGAGGAGGACTATTCCTGCGGGGTCTGTCACAAAGTTCTTAGCTCTGCCAGTTCTCTCGATCGGCACGTGCTCGTTCACTCCGGCGAAAGACCGTTCAAGTGCAAATACTGCGACATGGCCTTCACCACCAATGGAAATATGAACAGACACCTCAGGACGGCACATCGCGCTCTCTCGCCTCATAGTTGCACGGATTCCGAAGGGAGCAGCGATTCGGAAAAGCCTGTTAAGAGACGTCGCATCGAAGAGTACAATAACAACGAGATTGCCAAACGCAATTCTCCGGATCTCATTGAGAAACATAAATCTCCCAGCATGACCATTAACAAGAGGAAGTCGTTGGATTCAACGGATGAGGTTGAGTCATTGCGCAGGCACAAGATACTCTTGAACAGTTCCAGAACTGAGACCAAGAGCAACGTCTACGAGGACACGGCTGTTCACAATTGTCAAGTGTGCGGAAAACAGGATTTCGCCACTGCTGGTCTTCTGGAGGCTCATCTCGAGCGTAACCATCCTGAGGTGTCAGCGAAATGCGATATGTGCGAACTCTCGTTCAAGAATCATCGCGTGCTCAATCATCATCGGTTCATGACACACTTTAACGACAATTCGATTAACAATAGTTCACGGAACCTCAGGAACTCTGTGGTAGGTTTCGATGATTTGACATTCGTCGATTTCTCCGCTGACAAATTCCCGGCGATCGCCAGGGCCGTTTGCGAACAGTCCGTTCATAGGCCAGCTTCCGGGGAAGTTACCAGATTCCAATGCGCCAAATGTCTCAGGGCCTTCCCTTGCAGGTCGGCCCTGGAGGCGCACGAGTCTGACTGTGGGATACCGAATTCCCAGAGCAGAACCCATGGCGAGGATCAGTCTAGGAGGGACAACTTCTTTGCTGGTCTTGATCTTCAAAACAAGGCTGCTCTCGTCGAAGCCAAGGAAGGCAAGGATCTGGCTGACATACAGAGCATCATTTCCATGACCTCTGGACCCATTCTACAGAACTTTCCTAGGTCCGACGCCAGCACACCGGATAACAGTATCAAGATCAATCCCAACCTTGGATCCTCCGGTTCATCCGGCACACCCTCCTCCGAGTACCACGAGGAAGAAGCACAGGACGCCTTCGCGGCTGAGTTCAGGAAGATGAAACTCAAAGGAGAATTTCCATGCAGACTTTGCACCGCAATATTTCCAAATCTTCGTGCTCTTAAGGGTCATAACCGGGCGCATATGAATGTCGGTCCAGGTATGCCCTATCCATGTAACATGTGCCCGTACACGAGCACCGATAAAGCTACCCTCATCAGACATTTAAGGTCGCACAATGGCGATAGACCTTACGAGTGCTCTCTGTGTAACTATGCTTTCACGACCAAGGCCAACTGTGAAAGACACGTTCGCAATCGTCATGGCAAGCTCACCCGCGAGGATATTAAGAGCGTTCTGATATATCATCCCAACGAAGACTCCACAAACGACACCGTCGACCGCACGTCTCCCAGAGCCATCTCTAGGGAGGATGCTCGTAAAACTCTAGTCTATCACAGCGAACGTGACGAAGGCATCCATCAGCATCATCATTACTCTACGTTATCCATGCCCACTGAGCCTAAGTCTGAAATCCGAGTGATCGAGGAGGCCAAGCTTCGTCAGCCGGGAATACCCTCGCTGTTCGCCGTTAATCACTACGAAAATTCGGAATTCTTCTCTAGGCCAACGAGCATCCAATCCATGGAACTCGGAAGGCATTCCGAGGAGCCGGAGAAGGGTCAGGAACTGTTAGGAAAGCACAGTTACTCGAAGGACGATGAAGACGATCAAGACACCAGGTCGTCGGATGAAAGCGTGTCTCTAGTCAGCGAAACCAAATCCGAGCTGCACCAAAGAAATCAGGATGGTCCTATCGACTTGAAAAAGAGTATGGGAGACTCCGGAAACGTGGTAGATTCCGGAGTCGAAGAAGCTCCCCTTGATCTCTCCATGGATGCCCTTGATCTCAGAAAAAGATCCAGGAGCAACGAAGCCGATCAGCCTAGTTCGTCCGAAGACTACTCCAGGAATCCAAAGGACTTCTATAACGCTACGAATCAACTTTTATTGACCCAAGCTCTTCTCAAGGCCGGACAGGCTGGGACTCAGCCTAACTCCTTGGAAGCTCTATATGCAAACGCTCATctgatttatcgaaattttggCACTTTCCCACCAGGTACCGGCCTGATACCGCCTTATCTTCTTAACCCGCATTTATTTGGCCATGATTTTGCCATGAAGGACAGAATCCAAAAGGAACTGGTACGAGGCCTCCAGCTCACCAGTGGTGGAACTCTCGTGGAACCATCCGGATTCGTCTCAAACTTTCCTCAAGGACGTGAATTATCAGCGCATACAGCTACTGACCAAACCGATTACTCCAAACTAATTTCATCCCAGCTGAATAACAAGGTCTCGGTGCCACGCGAGAAGTTAGAAAACTCTCCCAGCTCGAATTCTGTCAAGATGGTGATAAAGAATGGAGTCCTCATGCCAAAACAGAAGCAGAGGCGATACAGAACCGAGCGACCGTTCACCTGCGAACACTGCTCGGCCAGGTTCACCCTCAGGAGTAACATGGAAAGACATATTAAGCAACAGCATCCTCAACACTGGAGCCAAAGACCACGAGGTGGTCATTCCACGAGAGGTCGACCTCCAGCGAATCCTCCGACCTTGTTACAAAATCTTGGACAGTCCAGCATGTCCCAGCAGGTGCAACAGCAATATCAAAACATATTACCAAAGATGGGACAGAATGTGAGTTCCGAGTACGGAAAGCACGCTATTTCCGATCAAGTGAAGTACGCCATACTAGCACAACAGTTGAAAGGTAACAGAGTAGAGGAAAATGACACCGACGAGGAGCTGATCATCGACGAAGGTCCAACCGGAAGAGAAACACCGGATGCCCATCGTGAGAGTGAACAGCAGCCTACCAGTCTACTCAGAGGCAAACTGGAGAATCGTTCCGAGCTCAATAAGGACCAGTTAAGCATCCTCAGCGAACACGTTAACGAATTCGCAAAGGAATGTTCAGATCAGTCTCAGAACAACGAAGAAGACGACGAGCACGATGCCAAGGGCAAAATAAAGTCTGAAATAAACGAGTCCAAGCCGGAAGTTGAGACTAACGCGGATGACGATGATCTAATGTCCGAGAACAGTCTGGTGAAGTCAGAAATGCCAGATGACATGGGAAAGAGAAGCGAATCGTCACGAGAGGACGAAAACGAAAGAACCGAGGATGGAACTGTTGATCTTGCTAGTGTTTCCAAGCTGCTGGACAATGCCTCCCAACAGTATCAACAGTTTCAACCTCAGTATCTTAGCGACGAGGAAGGTCTCGTTGCTTCTACGAGCGACTGCAACAATTCGGGTAGCGACGAGAAATCCGATTCCGGAAATTCAGTTAATTCCGGAACATCGAGCTCgtccaagaagaagaagaaaaagaagaagaagaagaaatctgCATACTCGATGGCGCCGAACAGAGTGATCTGTCCTTATTGCGAGAGGCCGTTCCCATGGACGTCCTCCCTGAGGAGACACATTCTCACTCACACCGGACAGAAGCCTTATCAATGTATACATTGCTCCCTTCTATTCACGACAAAGTCAAACTGCGATCGTCATCTTTTACGAAAGCACAAGACCAATCCCCACAAGATTCGTCGAGCAAGAAACTCATCGTCCCCGGAAGCGACAAATATACCAGCAAACAGCAATAGCTTCTCAATGAGAAACGTCCCGGAGAGACCCTACAAGTGCAACCAATGTCCAAGCTCTACCTTCTCCACTCTGGGAAACTTGAAGAAGCACCGATCGACGAAGCacatagataaaaaaaataaatccaggTGCAACACGCCGTTGAGCGAATCCCAAAACAGTCCGCAGAGTTCGGGGAAGCATAACGATCAGAGTGGATACGAGAGTCAGTCCTCGAGTATATCTGAAAACATGCAAAATTCGCCACAGAACGTCCCCGTTATCAAATTGACAACCAGTACGACCTCCTCCTCGATCAACGACGCGTCCCGTTCACGAAAAACTTCTCCAAGATCCTCACCAGGACCCGCCGAAGCGCCTTTCAAGTGTCACCTGTGCGACAGCGGCTTCGCGGAGCGCCAAGATTGCCTTGAGCACATCAAGGACAATCACAAAAGGTCCTACGAGATGTTGGTGGCCAAGGGTGCGCTGGACATGGATATAGAAGCAGCAGAGGATCAGCAACAACCTCTGGTACATCAGCAGGCGAGCGACGGTGAAGAGAAACGGGGAAAATTTCCTGACTACAGTAATAGAAAGGTAGTTTGTGCGTTCTGCATGCGCAGATTTTGGTCTGCAGAGGATCTTCGTCGTCACATGAGAACTCATACCGGGGAGAGGCCATTTTCTTGCGACATTTGCTGTCGCCGCTTCACTCTAAAACACAGCATGCTGAGACATAGGAAGAAGCACGAATCTGTCGACTCTCCTATGTACGTGGGCACGAGCGGAGATGAAGAATCCGTAGCGAGTCAACCACCCACGATCACACCGAGAAGTCAGCAGCATCCAGCACTCGTAATGTCCTCGACGAGTGATAACAGATTGCGAGAGCGCGTATCTCTACCCACTGTGGAGGCGGCTGTAGCTACAGCAGACGCTGCTCCCAGTGGTCTCATGAGGTACAACGCATACGAGAACCTCACTACTCTGACTGGACAGCTGACTACCGTACAACAAAGTGGAAATCTGGATGTTCCGGAAAATTCAGAGAACGATCTTATCTCGAATCTCCTTGGTATTCGCGATAAGAGCATTATAGACAGAGTGCTTCAGGCATCAGCTGACGACGCGGCCAAACTGCTCGGAGTCAAAAGAAACTAA
Protein Sequence: MDYSSKVTADSGPDQRQTSETQTDAGSSPLVEHPEGTYPCPACPTVLSTSRELTNHLRGHNSPRSTDCSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHRALSPHSCTDSEGSSDSEKPVKRRRIEEYNNNEIAKRNSPDLIEKHKSPSMTINKRKSLDSTDEVESLRRHKILLNSSRTETKSNVYEDTAVHNCQVCGKQDFATAGLLEAHLERNHPEVSAKCDMCELSFKNHRVLNHHRFMTHFNDNSINNSSRNLRNSVVGFDDLTFVDFSADKFPAIARAVCEQSVHRPASGEVTRFQCAKCLRAFPCRSALEAHESDCGIPNSQSRTHGEDQSRRDNFFAGLDLQNKAALVEAKEGKDLADIQSIISMTSGPILQNFPRSDASTPDNSIKINPNLGSSGSSGTPSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHMNVGPGMPYPCNMCPYTSTDKATLIRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNDTVDRTSPRAISREDARKTLVYHSERDEGIHQHHHYSTLSMPTEPKSEIRVIEEAKLRQPGIPSLFAVNHYENSEFFSRPTSIQSMELGRHSEEPEKGQELLGKHSYSKDDEDDQDTRSSDESVSLVSETKSELHQRNQDGPIDLKKSMGDSGNVVDSGVEEAPLDLSMDALDLRKRSRSNEADQPSSSEDYSRNPKDFYNATNQLLLTQALLKAGQAGTQPNSLEALYANAHLIYRNFGTFPPGTGLIPPYLLNPHLFGHDFAMKDRIQKELVRGLQLTSGGTLVEPSGFVSNFPQGRELSAHTATDQTDYSKLISSQLNNKVSVPREKLENSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLQNLGQSSMSQQVQQQYQNILPKMGQNVSSEYGKHAISDQVKYAILAQQLKGNRVEENDTDEELIIDEGPTGRETPDAHRESEQQPTSLLRGKLENRSELNKDQLSILSEHVNEFAKECSDQSQNNEEDDEHDAKGKIKSEINESKPEVETNADDDDLMSENSLVKSEMPDDMGKRSESSREDENERTEDGTVDLASVSKLLDNASQQYQQFQPQYLSDEEGLVASTSDCNNSGSDEKSDSGNSVNSGTSSSSKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCIHCSLLFTTKSNCDRHLLRKHKTNPHKIRRARNSSSPEATNIPANSNSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHIDKKNKSRCNTPLSESQNSPQSSGKHNDQSGYESQSSSISENMQNSPQNVPVIKLTTSTTSSSINDASRSRKTSPRSSPGPAEAPFKCHLCDSGFAERQDCLEHIKDNHKRSYEMLVAKGALDMDIEAAEDQQQPLVHQQASDGEEKRGKFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSPMYVGTSGDEESVASQPPTITPRSQQHPALVMSSTSDNRLRERVSLPTVEAAVATADAAPSGLMRYNAYENLTTLTGQLTTVQQSGNLDVPENSENDLISNLLGIRDKSIIDRVLQASADDAAKLLGVKRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01474941;
90% Identity: iTF_01474941;
80% Identity: -