Ccin002893.1
Basic Information
- Insect
- Cephus cinctus
- Gene Symbol
- -
- Assembly
- GCA_000341935.1
- Location
- NW:325943-340901[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 5.5e-06 0.00033 20.2 1.0 1 23 222 244 222 244 0.98 2 31 0.0024 0.14 11.9 1.9 1 23 267 290 267 290 0.96 3 31 0.0002 0.012 15.3 1.0 2 23 297 319 296 319 0.96 4 31 0.00026 0.016 15.0 0.5 1 21 339 359 339 360 0.95 5 31 0.0022 0.13 12.1 0.2 2 23 457 478 456 478 0.95 6 31 0.0058 0.35 10.7 0.3 1 23 484 507 484 507 0.92 7 31 0.0001 0.0063 16.2 0.1 1 23 580 603 580 603 0.96 8 31 0.0089 0.53 10.2 0.7 1 23 609 632 609 632 0.96 9 31 0.11 6.4 6.8 1.5 1 23 645 667 645 667 0.97 10 31 2.2e-05 0.0014 18.3 0.6 3 23 712 733 710 733 0.96 11 31 0.0071 0.43 10.5 0.8 2 23 796 819 795 819 0.94 12 31 2.8 1.7e+02 2.3 0.0 2 23 828 850 828 850 0.84 13 31 0.036 2.2 8.2 0.0 2 23 857 879 856 879 0.95 14 31 1.2e-05 0.00069 19.2 1.2 1 23 887 909 887 909 0.98 15 31 0.035 2.1 8.3 1.4 2 23 940 963 939 963 0.93 16 31 0.00019 0.011 15.4 3.3 1 23 966 989 966 989 0.97 17 31 0.0051 0.31 10.9 0.4 2 23 996 1018 995 1018 0.95 18 31 0.0029 0.17 11.7 5.1 1 21 1045 1065 1045 1066 0.95 19 31 0.0024 0.14 12.0 1.8 2 23 1080 1101 1079 1102 0.93 20 31 0.19 11 6.0 0.9 1 23 1105 1128 1105 1128 0.94 21 31 0.015 0.89 9.5 1.4 2 23 1135 1158 1134 1158 0.91 22 31 0.86 51 3.9 0.2 2 23 1166 1188 1166 1188 0.95 23 31 2.8 1.7e+02 2.3 0.0 2 23 1195 1217 1194 1217 0.87 24 31 0.2 12 5.9 2.7 2 23 1226 1248 1226 1248 0.96 25 31 2.7 1.6e+02 2.4 2.0 2 23 1254 1276 1254 1276 0.92 26 31 2.3 1.4e+02 2.5 0.0 3 23 1339 1360 1337 1360 0.93 27 31 0.00032 0.02 14.7 1.0 1 21 1386 1406 1386 1407 0.95 28 31 0.44 26 4.8 1.3 2 23 1506 1528 1505 1528 0.93 29 31 0.54 33 4.5 0.4 2 23 1535 1557 1534 1557 0.94 30 31 0.62 37 4.4 2.5 1 23 1568 1590 1568 1590 0.97 31 31 0.071 4.3 7.3 0.2 3 20 1599 1616 1599 1618 0.94
Sequence Information
- Coding Sequence
- ATGGAGCCAAGGGAACGTTATCACGAGCTCTGCAGGCTCTGCGCCTCCTACGACGCCGTCAAGATGAATATATTCGGCCAGGAAGGGAGGAATCGTCAGCTTGTCGACAAGATACAGACTTGTCTGCCCTTCAAGatAGCGGAGGATGATCGTTTGCCAAAGTGTTTATGCTATCGATGCATGTACAAtctggaaaatttttatgacttCAGAACTGCATGTGTCAATGCGGTGGCATTATTGGAAAGATGTTTACCCTCCAGTGATGCGAGTAACAATGGAGCGCAGACTCATATGGATCAGTATACAGAGCTGCGCTCTGAGCTTCTcaaggagaaagaaaatatgcCTATACTCATTCCTGAAGCCCCCATAGTCAATCCCAATGCAGCCCTGGGCACTCCACCAAGACTGAATTCTGATGGTGAAGCGGATCATGAGATTGAAGAAATACTTGATCAGAGTGGCACCGATGAAGgCCAAGACGAGCACGAGGATCCTAAATCGGACGAGTATGAAATGGATATGGAAACTAATCCAAGTGATTTCCTGGAGATGACGTCCATTGTCACTGACGACGTCGAGGAGATACGATCTCTCTCCATGCCACGTGAGAAACAAGACACCAGTGTTTTCCAGCACACGTCGGAACAGCACGAGGTCTACGTGTGCTCTTTGTGCAACAAGGCCTTCAGCTCGAAAGGGCATCTCTCTTTGCATGCTAGAATCCACGTGGGTGCTGGTGATGTAATCGGCGAGAAAGTCATCACCGACGATCACACCTCCTACAAGAGACCTTATCAATGCGACCTCTGCAATAAGTCGTACTCAACGGCAAAGCACAGATGGGGACACGTCTCAACGACACATAGGGGTCATCCAGCGGTTACGTGTAGATACTGTTCTCGGATTTACTCGACGAGAACGAACCTGGAGGAACACATAAAGTCTCGTCATGCAGGCTTACCACCACCTCCGGAACTACCACTTCCTTATATTCAACCTGATAACAGGTTCCAGTGTAAAACGTGCCCAAAGATGTATACGAACGTCACCGATCTGAATAAGCACAGTCGTGTCTGTCTGGGCGAAAGACGTAGAGAACTGCCCAACAAGATTTCCGTTCAGAAGAGCAAAAGTCTTATAGATACGTCGGATCTATCTAGTATGGACTCCGACGACGAGAGTAAGGACTATCGGGATGCCGAAGCGAAACTCGCCAAGAATCCCCAGCTGACTATACTTAAGCAGGCACTGACCAAGGGCGATAGCCTTAAGCGGGATTACGAGGACAAAAATAGAATTGGCTCGAAACCTATGAAAGTCGCGAGGACAGaCAGCAGTGAAACCGATGCTCAGAAGAGGTGGTACTGTGAAACCTGTCCACAGAATTTCACGTCGGTGGAGAATTTAAAGGAACACGAAGTCACCCATGAGGCGGACAAACCCTACATCTGCATCCTCTGCGAAAAGGATTTCGTCCTTAAGTCGTCTCTGAGTAGACATATTTTGACCTCTCACGGGGTCGATCCTTCTCCAATCGTTGACAGTGATAAGTGTCTAAAGAAAACAGTGTCTAATCTGCAAATGCGGAATAAGCAGGCGCAGATCATCTACAACGAGTCCAAGTTAACCAAAGAGGCATCTCAATCTCCATTCTCGCCAGAGATGAATATGGATAACGACGAGGAGGATCGTGAGAGCGGCCACGAGAACATGATTGAAATCGAGACTGTGTTTGTCTGTGAAATATGCACTAGGGATTTTAATGATCGTGCATCACTATGGTTACACATCAGAGCGACGCACAAAGAATTCGCGGCGTTTGCTTGTGGAGTCTGTTTAAAGATTTGCTCGGACAATACTCAGCTCTTGAATCACGTTAACATGTACCACGGTGGCTCAAAGCTTCAGGTCTCAGAACAAAGAAGGTATAGTTGTACAATCTGTGGCAGGCAACACGATTCCAGGAAGAAGCTCATCACTCACGTTTCTATTCATAATGTTGATCCTGGTTATGATCCAGCGAGTTTTGTTCAACTgaatagtaattattataacgaGAATCTGAATAGTAACGAAGCCAATGAACAGCCCATTGATTTTGATGGTGAAGATGGAGAGAAGATCGACTGCTATATATGTTACAAGTCTTTTCCTAACGAGGATCATCTCATTAGGCATCAGCGGAACGCTCACAAGtcCGAACCCCTGGTGCAGATGGGTGACCCTAGCAATGGTAATGGATCCGGTTCTACTCCAGGCAATGGAAATCGTGCTCAGTATCATTTGTTCTTCGTTTGTGAACTTTGTGGCAGTTCGCATCCAAGTAAATGGGAGCGGTGGCTACACGTTAGTGGAGTGCACAGTAATGAACCTGCCATAAGGTGTGAGCGCGAGGACTGCGGTAAAATATTTGCTACTAGGTCACTTCGCAACGAGCATGTGCAACATCATCTTCTTCAGGGTGCCTCGCCGAATACCTGTGAGATATGTGGGAAGCTGTGGGGCAGTCGTGTGGATTACTGGAAGCATGTAATGGGCGTACACTCTGACACGGTACCCTTAATCTGTGGGGTATGTCTAAAAGTCTTCCCCGACGTCATCCAACTTAGTGCTCACGTCAAGTCGAATCATTGGCCTCTAACCAACGGAGACTTCAGCTGTGATATCTGCGGGAGGCCGTActcaaataaatcaaaaatgtCCCGGCATAGGAAGATACATGGTTTGGATACGGACAGCTACGCCAACAGCACCTTGCACGAGGTTATGAACGATTCTAGGCTGGATCAGGGTTCCCACGAGAGCGATCTCACCTGCGAGATGTGTTCTGATGTCAAATTCACTAATCTGGATGACCTGTGCAATCACAGAAGAACAGCGCACGGCCTGTTCCCTTGTGATCTTTGTAATAAGTGCTACGGACGGACCTCGCACCTTTGGAAGCACGTCAATCGTGTTCACAAGGGTCACGAGGACGTCACCTGCAGGTACTGCCTGAAAACCAGCGCTTCGAGGGATCATCTTGCTGCTCACATTGCCAAGATACACAGGTATGAGCCGGAGATGAAGAAGGAAATACGGGAGTCGTCCATCTTCAAGTCGCCTAATCCTGAGGACGAGACTCTTCATCATTGTGAAAAGTGTAACAAAGGTTTCCACAAGAGATATCTTCTACGTCGTCACATGAAAGGCTGTCAGAACTACAGAAAGGATCCCGGTGCGTTGCTCACTAGGTGTCGTGCCTGCGAGAGGATATTCAAGGACCGTGCTAGTCTCCAGAAACACATTGAGAATCATCACAGTACCTATACCTGCCATCTCTGCGATGAGACCATAACCTCCAAATTAGGTATCATGACGCATAATAGAGTGAACCACATGAACCATCCAGACCTGACTTGTGACTATACAAGTTGCAAGAAACTGTTCCGTACCAAGGAGGACCTGGAGTCTCATCGCAAAGATCACAAGTACCTTGGTACTCCTAACGTCTGCGACTTTTGCGGTGATACCGTTGAGAATAAGCTTAAGCTCAAGATGCATATACTATCCTTACACCGTAACGAAATAGGAGTATCATGTGGTGTCTGTCTTATACCCATGAAGGATCCTAAGGAACTGAAGAGACACGTGGAAGACGTCCACAGGAGTATATTGTCTAAACCTAATACCTGTCAGGTGTGCGGCAAGCAATACGCCTCCAAGTGGAAGGCTTTTGATCATACGAAAAAGTGTCACGGCAAGGTGTTCAGGACTTGTAAACAGTGTCTCGCAGTGTTCACTAGTGACGAGGATATAAAGCATCACTACGAACATGTTCACAACGTTCCCAAGGATCAGCTTGCTGGTTTTGAGTTCAGGTTGGACGTCGGACCCAGGCAGGAGGAGTTTGACGCCCCTGATATCGTTGTTAAGGAAGAGCCTCAAGAGCTTGATTTCTACGAGGAGCCTTGCGAGGAAGACTATCACAACTCTAAGAGAAGGAGGTCGTTTTCTGATACTCTGGACTGTGAGATGTGTCCTGAGATCTTCCTGAATGACGTCACTCTGGCTGAGCACTATAGAAACGTTCACAATACGGATCCTATGCGTATATTCAAGAAGCTTAAACTAGACACTGCAAAGCGGAAAACGAAAAACCGCGAGAACTTTGAATGTAAGAACTGCAGAAAGCAGTTCTCCACGAAGACCCTCTTCTGGAACCATATAAATGTCTGCTCCAAGCGTAATTCTATAAACAGAGATGACAGGGTGTACTCCACATCCATTCTGGAGTCTCACCTCAAGAATAACAATCAGATTAAAAAAGAGGAGCCTGAACCCATCCTTAATGAGTCTAATCTGAACATTCCTGACTTCAATCTCTTCGAGGATATTAATATGCAACTCTCTGGACAGAAACCTGTACCTAACCTCATGCCTCTGTCTCATATGAAATCGCTGTCAAGTATAAAGTGCTCGAGAAAGGACTCCAGAAAGGTGTACGATGAATCGACGAATACCGAGTGTGCCTGTGAAGTCTGTGGAAAACAATGGCCAGCTAAGAAGCATCTCTGGCAGCATCTTATAAGGTTTCACAGAACGGAAGCTGCTGTCACCTGTGGCGTTTGTCTGAAGCTCTGTAAAACTTATCAGGACCTGGCGGATCATCTCAAGGCAGCCCACGAAGCCATCCTTACCTGCGAGGGTAACAATTTCACTTGTAAAACCTGTGGCAGGTATCATAATGCTAGAAGTAAATTACTCTTGCATATGAGCATACACATTAATTGTAATGGTAGCAGCTGGTGTAGAAAATGTCAACAGAGTTTTGAGAGTGAAGATAAACTCAAGGAACACGTCGCTATCTGTACTGGCGGTAACCAGGTAGAGTACGAGAATCATAGTAATGATCTGGAGAACGCTGCCAAGAACAACGAAAATGATCACGATTATAAGAATATTCTTATGGACGACGAGCATTCCTTGATGGAGGAAGTGGACGAGGTCGAGGAAGTTGAGTTTGAGACTGAAGCTTCTGATAATCGTGAGGATAGTAATTCAGATGACAGTGGTGATTCCGATAGTGATAGTAATCCTAGTAGTAGTGACGACGAGGATAACGATAATGAGAATGAGGATGAAGCTGAGTGTAGGACTAACAGTAGAGCTACGGAGGTTAGCAGTGACAGTGAGAGTGCAAATCAAGATTCGGACGAGGATAAAGTTAATGTGGCTAAGGATCATCATCTGGAGCAGAGTGAAGACATCAAGTGTAACAACATTGTCAAAGCAGAACCCGAGAATGAGGAGGAATCCCAGTATCTACAGTATAAGGAAGAGTCTCCTGCATTGAAGGTAGACGAATATCCTATGGAGGAAAGGATGGATCATGAGAATCACGAGGTTGTCAAGGTCGAGGCCGACGCTCCAGATTACTCTGACGATGACTTAGAcgaggatgacgatgatggaCCCCCAGTACTAAGTCCAATGATGCCATTACCACCTGTTCAGGATGCAGAACATGATAACAGACATTTGGACGACGAGATACAGCATGAATTAACGCCTATGGTGTCtattaaaaagtcaaatgaGACTGAAGGGGTCGACGATGATGATCACCAGGAGTTCAAAGACCAAATAGAAAACGGTAAGTCGACTTCCAGCTCCTCCGAATATTATGAGAAATCCGATCCGCAGAAGGTGAGTTCGAATGTGCCTTCAGTGGTAATGGGAGAATCGCAATCAGATACAGAAGAGGAGGGCGAGGCTGAGGGTGACGAGGAAGAGTACGATAGTCAAATGGAAGCTGTGGATCAGACCGATGAAGAGAATAAAAGGTTCATCAGTTATGAGACGCATAACACTGAAGACTCCGTTGAGGGTAGCTTTGCAGAAAATTTCGAAGACGAGACAATGGAGGTCGAGGTTGCTGATGGAGATGGTAGCGTCCAGATACACGACCTCGACGGTACTGTACTGATGGTAGCAAATGATTCGGATGGTAATCAGATTCTGATCCAAAGGAACGTAGCTGACGTGATCGAGAACGACGATTCTAATCCGGAAGTCACTGAGTACGTCTACCAAGAAGGGCAGGAGTACGAACTGGAGGAAGGATACGCGGAGTCGCAGCAAGCAGATGACGTTCACGACGTCTCCGACGAGGTTcaggaggaggaagatgaaATCGGTAACGAGGAATTCGACGAGGAAGTCGTTACGAGGGAGAACGAAAATGAAGAAGGCGATGATATGGAACCTGAACAAGAGGAGtatgaggaggaggaggaggaggagcaggagcaggaagaggaggaggaagaggaagaggggCAGGAGCAGGAACAGGAGCAAGAACAGGATCATGAGCAGGAAGCGGAAGACTGTGAAGAGGAGGTTGttgacgaggacgaggattCCAAAAAACCGATTAATAGTGCCAAAACCGTAGTGTCAAGGACGTAA
- Protein Sequence
- MEPRERYHELCRLCASYDAVKMNIFGQEGRNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPSSDASNNGAQTHMDQYTELRSELLKEKENMPILIPEAPIVNPNAALGTPPRLNSDGEADHEIEEILDQSGTDEGQDEHEDPKSDEYEMDMETNPSDFLEMTSIVTDDVEEIRSLSMPREKQDTSVFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRTNLEEHIKSRHAGLPPPPELPLPYIQPDNRFQCKTCPKMYTNVTDLNKHSRVCLGERRRELPNKISVQKSKSLIDTSDLSSMDSDDESKDYRDAEAKLAKNPQLTILKQALTKGDSLKRDYEDKNRIGSKPMKVARTDSSETDAQKRWYCETCPQNFTSVENLKEHEVTHEADKPYICILCEKDFVLKSSLSRHILTSHGVDPSPIVDSDKCLKKTVSNLQMRNKQAQIIYNESKLTKEASQSPFSPEMNMDNDEEDRESGHENMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNTQLLNHVNMYHGGSKLQVSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPASFVQLNSNYYNENLNSNEANEQPIDFDGEDGEKIDCYICYKSFPNEDHLIRHQRNAHKSEPLVQMGDPSNGNGSGSTPGNGNRAQYHLFFVCELCGSSHPSKWERWLHVSGVHSNEPAIRCEREDCGKIFATRSLRNEHVQHHLLQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSAHVKSNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDTDSYANSTLHEVMNDSRLDQGSHESDLTCEMCSDVKFTNLDDLCNHRRTAHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCLKTSASRDHLAAHIAKIHRYEPEMKKEIRESSIFKSPNPEDETLHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCDETITSKLGIMTHNRVNHMNHPDLTCDYTSCKKLFRTKEDLESHRKDHKYLGTPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKELKRHVEDVHRSILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDIKHHYEHVHNVPKDQLAGFEFRLDVGPRQEEFDAPDIVVKEEPQELDFYEEPCEEDYHNSKRRRSFSDTLDCEMCPEIFLNDVTLAEHYRNVHNTDPMRIFKKLKLDTAKRKTKNRENFECKNCRKQFSTKTLFWNHINVCSKRNSINRDDRVYSTSILESHLKNNNQIKKEEPEPILNESNLNIPDFNLFEDINMQLSGQKPVPNLMPLSHMKSLSSIKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRTEAAVTCGVCLKLCKTYQDLADHLKAAHEAILTCEGNNFTCKTCGRYHNARSKLLLHMSIHINCNGSSWCRKCQQSFESEDKLKEHVAICTGGNQVEYENHSNDLENAAKNNENDHDYKNILMDDEHSLMEEVDEVEEVEFETEASDNREDSNSDDSGDSDSDSNPSSSDDEDNDNENEDEAECRTNSRATEVSSDSESANQDSDEDKVNVAKDHHLEQSEDIKCNNIVKAEPENEEESQYLQYKEESPALKVDEYPMEERMDHENHEVVKVEADAPDYSDDDLDEDDDDGPPVLSPMMPLPPVQDAEHDNRHLDDEIQHELTPMVSIKKSNETEGVDDDDHQEFKDQIENGKSTSSSSEYYEKSDPQKVSSNVPSVVMGESQSDTEEEGEAEGDEEEYDSQMEAVDQTDEENKRFISYETHNTEDSVEGSFAENFEDETMEVEVADGDGSVQIHDLDGTVLMVANDSDGNQILIQRNVADVIENDDSNPEVTEYVYQEGQEYELEEGYAESQQADDVHDVSDEVQEEEDEIGNEEFDEEVVTRENENEEGDDMEPEQEEYEEEEEEEQEQEEEEEEEEGQEQEQEQEQDHEQEAEDCEEEVVDEDEDSKKPINSAKTVVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00295442;
- 90% Identity
- iTF_00297739;
- 80% Identity
- -