Basic Information

Insect: Cephus cinctus
Gene Symbol: -
Assembly: GCA_000341935.1
Location: NW:920739-928090[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6.9 4.1e+02 1.1 1.0 3 23 152 172 147 172 0.83

2 16 3.2e-05 0.0019 17.8 2.5 2 23 177 198 176 198 0.97

3 16 3.6e-05 0.0021 17.7 1.4 2 23 205 226 204 226 0.97

4 16 6.3e-06 0.00038 20.1 0.6 1 23 232 254 232 254 0.98

5 16 1.2e-07 7.1e-06 25.5 1.0 1 23 260 282 260 282 0.98

6 16 0.043 2.6 8.0 0.4 1 20 288 307 288 310 0.93

7 16 1.5e-05 0.00088 18.9 1.7 1 20 316 335 316 338 0.95

8 16 9.3e-07 5.6e-05 22.7 2.4 1 23 344 366 344 366 0.97

9 16 2.6e-05 0.0015 18.1 0.6 1 23 372 394 372 394 0.98

10 16 6.6e-06 0.0004 20.0 5.0 1 23 400 422 400 422 0.97

11 16 3.3e-08 2e-06 27.3 0.4 1 23 427 449 427 449 0.97

12 16 0.00013 0.0075 16.0 0.4 1 23 455 477 455 477 0.97

13 16 1.1e-06 6.4e-05 22.5 6.2 1 23 483 505 483 505 0.98

14 16 2.7e-06 0.00016 21.2 1.5 1 23 511 533 511 533 0.98

15 16 2.3e-06 0.00014 21.4 0.5 1 23 539 561 539 561 0.97

16 16 0.00031 0.019 14.7 1.2 1 23 567 590 567 590 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6.9	4.1e+02	1.1	1.0	3	23	152	172	147	172	0.83
2	16	3.2e-05	0.0019	17.8	2.5	2	23	177	198	176	198	0.97
3	16	3.6e-05	0.0021	17.7	1.4	2	23	205	226	204	226	0.97
4	16	6.3e-06	0.00038	20.1	0.6	1	23	232	254	232	254	0.98
5	16	1.2e-07	7.1e-06	25.5	1.0	1	23	260	282	260	282	0.98
6	16	0.043	2.6	8.0	0.4	1	20	288	307	288	310	0.93
7	16	1.5e-05	0.00088	18.9	1.7	1	20	316	335	316	338	0.95
8	16	9.3e-07	5.6e-05	22.7	2.4	1	23	344	366	344	366	0.97
9	16	2.6e-05	0.0015	18.1	0.6	1	23	372	394	372	394	0.98
10	16	6.6e-06	0.0004	20.0	5.0	1	23	400	422	400	422	0.97
11	16	3.3e-08	2e-06	27.3	0.4	1	23	427	449	427	449	0.97
12	16	0.00013	0.0075	16.0	0.4	1	23	455	477	455	477	0.97
13	16	1.1e-06	6.4e-05	22.5	6.2	1	23	483	505	483	505	0.98
14	16	2.7e-06	0.00016	21.2	1.5	1	23	511	533	511	533	0.98
15	16	2.3e-06	0.00014	21.4	0.5	1	23	539	561	539	561	0.97
16	16	0.00031	0.019	14.7	1.2	1	23	567	590	567	590	0.94

Sequence Information

Coding Sequence: ATGGAAGATTTTTCAGTGAAAGACGAACCAATGGATGCTTTAAGTTTAGAGGCACAGGTGATGGCTGAGAACATTGTAAGCGTTGTACTTAAAGAAGAACCTGGAGCTAGATTCGATCCAAATTATATGGATGATATCTGTTCAGGGAACTTTGAAAAGGTATTTCTACCTATCGAGAATCAGGAAGTTGATTTATCTGAAGAAATGGTTCAACTAGGAATTAAGAATGAGGACAATGTTCAGCACAATTGGCCAGAGCAGGTCATTGACAACAGTTTATGTGAGAAGGAAGATAACTCACTGCATCGATACCTGGTCGATTCCGAACTCCAGCAAACCTATCTTGATTCAACTACCTCAAGAGATACAGTGAATTCAATGAACGAAGATGATTCTGGACGATATAACTTATTTGGCATAAACCCTCAGCAATCTAAATTCTGCAAAATACAATGCATCGTATGTAAAAAATGGTTTTTAAACAATGAATCTCTGGTCACTCATTTAGGTACACACTGTGAAGGAACTCAATGTGAAGTGTGTAATGAAAACTTTGAACACAAATCTAGTTTGCATGCTCATATGCTACTTCACATGGGCATGAATCCATTAGAATGTAACATATGTCAGAAAAGATTCACCAACAAATTACGCTTACGTGGTCACATGCAATCCCATACAACAAATAATCCATATGAGTGTGATACCTGTCAAAAAACATTCATAAAACGATCAGGTTTAAGCAATCACCTGTTGATTCATGCTGGCGAAAGATTATTCAAGTGCGAAATTTGTCAAAcaacttttaaagaaaaaggaaatttgaATCGACATATGCTAATTCATACAGGAGAACGTTCATACAAATGCGATGTGTGCTGTGCAGTTTTTCGCGAGAAAGCTAAACTAAACATTCACATACCAGTTCACAGTGGTATAAAGCAACATCAGTGTACCGTATGTCACAGATCATTTGCACAAAAAACAGCGCTAAATAATCACATGCCGGCACATAGTGGTCAAAAACCGCACGAGTGCAATATTTGCCAAAAAACATACAAACGAAAATCTGAATTAGTAAGGCATACCCTGGTGCATACTGGCGAGAGGCCATACGAGTGTAAAGAATGCCTAATGACATTCAGGGAAAAGGCAAAGTTGAACTCCCATATGTTGGTTCACACGGGCGAGAAACCACACGAGTGTCACATATGTCAAAAAGCTTGCGCACGTAAATCGGATCTCAACAGTCATATGCTCTCCCACACTGGTGGCCAGTATGATTGCAATATATGTGAGAAAATCTTCACAAGAAAATCTGATTTAAATAGACACATCTTAATACATACTGGTGAGAAACCATTTGCATGTCATTTATGCGAAATGGCATTCAGAGAAAAGGCTAGACTAAATGCTCACATGCTTATTCACACTGGTGATAAAAGACATACCTGTCATATCTGTCAAAAAACATTCAGGGAAAAATCTACCCTGAAAAAACACATGCTCATCCATACTGGAGATAGACCGTACAAGTGTTTTGTTTGTCGTAAGGCCTTTACTCAAAAAACGACACTTAATAGCCACATATTGATTCATACCGGCGAGAGACCTTATGAATGTAATGTCTGTCAAAAAATGTTTAGAGAACGATCTGCATTGAGAAAACATGAACTAATTCACACAGGTGAAAAACCATATGAATGCATCGTTTGTCTAAAGAAATTCACCTACAAATCAGCACTAAAAAGTCATATGACAAGCAATCATTCATCGTAG
Protein Sequence: MEDFSVKDEPMDALSLEAQVMAENIVSVVLKEEPGARFDPNYMDDICSGNFEKVFLPIENQEVDLSEEMVQLGIKNEDNVQHNWPEQVIDNSLCEKEDNSLHRYLVDSELQQTYLDSTTSRDTVNSMNEDDSGRYNLFGINPQQSKFCKIQCIVCKKWFLNNESLVTHLGTHCEGTQCEVCNENFEHKSSLHAHMLLHMGMNPLECNICQKRFTNKLRLRGHMQSHTTNNPYECDTCQKTFIKRSGLSNHLLIHAGERLFKCEICQTTFKEKGNLNRHMLIHTGERSYKCDVCCAVFREKAKLNIHIPVHSGIKQHQCTVCHRSFAQKTALNNHMPAHSGQKPHECNICQKTYKRKSELVRHTLVHTGERPYECKECLMTFREKAKLNSHMLVHTGEKPHECHICQKACARKSDLNSHMLSHTGGQYDCNICEKIFTRKSDLNRHILIHTGEKPFACHLCEMAFREKARLNAHMLIHTGDKRHTCHICQKTFREKSTLKKHMLIHTGDRPYKCFVCRKAFTQKTTLNSHILIHTGERPYECNVCQKMFRERSALRKHELIHTGEKPYECIVCLKKFTYKSALKSHMTSNHSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00294657;
90% Identity: iTF_00294657;
80% Identity: -