Basic Information

Gene Symbol
grh
Assembly
GCA_000341935.1
Location
NW:1215181-1257021[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-62 3.1e-58 196.0 0.0 28 221 741 936 726 938 0.92

Sequence Information

Coding Sequence
ATGTCGACCTGCACCGATGAAGCTGACAATGGACCGCTGCATATGCAGGAGGCCCTCTCACCGGTGCAGGAGGGTCCGGTGTCGCCAGCATCGTCCTCTCTGAgcaatcaaaatcaaaatgaaaacgaGCAGGTCCTGCTGGCGACGATGCAGCCGGTCAACGTACTCGATCTCCACGAACCACCGCATCCGCTTCATCACAAgtaccaccaccatcatcatcgtcaCCATCATCACcagcatcatcatcatcagcacATGCAGCAGGATCAGGACGAGCAAAGGGGTCCGGACGAGGACGATCGGGTCACGCCGGAAGCCGCTGGTGCCGGTACGAATTTGGGTGAGCACAAGATGATCGACCTGATCTACAACGACGGGCAGAAGACAGTGATGTACACCCACGACAAGGAGATCATCTACGAGAACGAGGCGGACAGGGTCCAGGTGGTGGAGTATCCGCCGCCGCCCCCGTCACCGCCGTCCCCATCGCCACCGGCCACTACGGCTGCAGCCGTTGCAGCAGCCAGGGGCGCTTTGCTACCGGGAAACTGTGGTCCATCCAGGACATCGGCCGCGCTTCATCTGCATCACTATCCCCAGCTGCAGCTGCAACACGAGGACGATATACCACGAGGAGTCAGTGCGAGCGTGTCCAATTGCGCAGCAGCCACGACCACCACGACCGTCCTGGTCCTTTCTGAGCTGGTCGCGGCTGATCCTGTAGCTGGAGCCGCAGCAGCCCAGCAGCTCACCCTGACAGCAGCCTCGCTACGTGCAGGACGGCGAAGTCGCACCGAGGAGAATTCAGGTGGGGTCGACGAGGAGGGACAACAGGGCTACGGGGCCGTGGCGGGCACGCGAGAGACAGAGGACGAAGAGGAGCTGGGGGCCGAAGAGGCGCAGTCGCTGCAGAACGCGGCGGTACAGGGCGAAGCTGCGGACCCTGAGGTCCATAAGAGGGTTGCTGCCGTGCAGGTGCAGGTGCAGGGCATGGAGGGTGACTGGAGGGCGTACTGCGAGCATCCCTTGTCGGTTGCTACGGCGGCAATGTTGAATCTACAGCAGCAGCATCAGGTTCCCGCCGTGTCCGGACACAGCGATGATCCGGCAGCCTCCTAcgtttatgaatattataaattaccaGAAAAGACGGCGGATGTCAAGCTGCCGCCTACTCACGAACTCTGGTCCACGGGTGTAATGGGCCAGAAGCTGCTGGTGCAGGAGGCGCCTGGCCCAGGGCCGGGTCCTGGTTCGGCGAATAGGATGGAAGGAGGCGAGGGCAACGGCGGCGGAGGAGGGGAGCTCCACCACTTCCTTCATCAGTACAACCAACAATCCCACAGTCCTGGCCAGAGCCTTCAGGGTGGTCTTCCGCTTCCGTTGAGTCCGCAATCGTTGCGCCACGACGGAACGTCCAGCGGCGGGATTGCCGGGGTCAAGAGGGAACCCGAAGACCTCAGCTCGTCCCGCGGGGGTCAGCAGTCGAACAAGCGGCACAAAATGGCCCAACCTGAGAGTCCGACGCCGCCAGGGATGTACCACCATCACCAGCATCAGTTACAGGTGCAGCAGCAATACGGCAGTCCGTACGATCCTTACTCATCCTGCAGTCCGCGATTGCAGTCTGCAGCTTACACCTCGACCTCGGGCAACCCTACGGGAAATGCAGCCAATCCGACGGCACTTCATCAGGAGGCCACTGCGGTCTACGTCACTGGCGATGCGCTTCCACCTTTAGCATCATCCAGCTCATCCTCGTTGTCCACGACAACCGCTTCGTACACGAGGTACGAGGTTGTACCGAGCTCTTATGCTACGACACACGCGATTCGCTCCTCCTCGAGCAGCAGCAAAGTGTTGACCGTTGATCTTCCCAGCCCTGATTCCGGTATCGGTGCCGATGCTGTCACCCCGAGACAAGATCATCATCCACCCACGGCTCTTCATCAGTCGTCCTTTGACTACACGGAACTGTGTCCTGGTGGACCAACCGCAGGCGCCGCAGTCGTACTCGAGAGTGGCGCCGTGATACATCATCAGCCATTGCAACTGCAATTGCAACAGAGCCACACGCAGGCGCAAGTGCAACGAGGTACACTGGTTGCCGCTGGAGCAACTAACCCAAACCCAAACCCTCCGAGATCCAGACCCTGGCATGATTTTGGTAGACAAAATGATGCGGACAAGATACAAATACCAAAACTCTACTCGGCGTACGGATTCAAGTATCATCTGGAATCGCCCATCAGTACGTCGCAGCGACGCGAGGACGACAGAATAACGTATATCAACAAAGGACAATTTTATGGTATCACGTTGGACTATGTGCCGGATCCCGACAAGCCTCTGCTCAAGACGGGGCAGACAGTTAagAGCGTTGTAATGCTGATGTTCCGGGAGGAGAAGAGTCCCGAGGATGAGATAAAGGCTTGGCAATTCTGGCACGGTAGACAGCACTCCGTTAAGCAACGTATCCTTGACGCTGATACTAAAAATAGCGTAGGTCTCGTTGGCTGCATCGAGGAAGTGGCTCACAATGCAATAGCCGTCTACTGGAATCCATTAGAATCTTCGGCCAAGATCAACGTGGCGGTACAGTGCCTGAGCACGGATTTCTCAAGTCAAAAGGGTGTAAAGGGTTTGCCCTTACATATTCAAGTAGACACGTACGAGGAGCCGCCGCCACATCCTCACTCTTATACTCCTCCGTCTCATAGAGGTTATTGCCAGATAAAGGTCTTCTGTGATAAGGGTGCGGAGAGGAAGACGCGCGACGAGGAGAGAAGAGCGGCCAAACGAAAAATGACGGCAACAGGAAGAAAGAAGCTGGACGAACTTTATCACTCGGTCACGGAACGcagtgaattttattcaatggcCGATCTTCACAAACCTCCTGTGCTCTTTTCGCCGCCCGCCGAACACGCCATTGATAAGTGTTTCTTTTCACGACAGTTCTCAACGATGGAGTTGTCGGGATTCTACGGAGGTGGCGGCGGCGGGGGCGGGGGCGACACGGACACTTCATCCCTCAGTAACGGTGAGGGTGGAGGATTGAAGGCAGGGGGTAGCAGCCCTTATCCCGCGTGCGGCAGACCAAGCCTGCCAGCTCTCAAGTTCCACAACCATTTTCCGCCCGACAATCTGAGTTCGCTCCACGACAAGAAGGACTCGTTGCTGATGCAGGTGCAGGAGCTCCAGGGCTCGGTACTCCAGAATGTGCAGCAGGGCAACTTGGGCTCCGGCACGGTTGTCTCGGGTGTCGGTAACAGGCTTCAcatgcagcagcagcatttGCGCGGCACCGACGCCGAGGAGCGCGTGATGCTCTACGTTCGCCAGGAATCCGAGGACGTCTACACGCCGCTTCACGTGACGCCACCGTCGGTCCAGGGACTTCTCAACGCTaTTGAGTCAAAGTACAAAATTGCATCCTCGAGTATTAATAACCTCTATCGCAAAAACACAAAGGGAATTACAGCGAAAATTGACGACGACATGATACGCTACTACGTCGACGAGGATCTCTTCCTTTTGGAGGTGAGCCACTCGCACGTTAATTCCGATCGCAATCCCAATCCAGGATCACCGGGTGATCCTGGGGATCCTGGTGATCCGCCATCCGCTGGCTACGACGTCACTCTCATCGAACTTTCGTCTTCACCGACGCCATTACCGCCCTCGCCGCTTACCGTAACtgcggcgcatgcgcacgctCACAGCCATTCGCACGTCCACTCGCACGTACACGAGACTGGAAACACGTGA
Protein Sequence
MSTCTDEADNGPLHMQEALSPVQEGPVSPASSSLSNQNQNENEQVLLATMQPVNVLDLHEPPHPLHHKYHHHHHRHHHHQHHHHQHMQQDQDEQRGPDEDDRVTPEAAGAGTNLGEHKMIDLIYNDGQKTVMYTHDKEIIYENEADRVQVVEYPPPPPSPPSPSPPATTAAAVAAARGALLPGNCGPSRTSAALHLHHYPQLQLQHEDDIPRGVSASVSNCAAATTTTTVLVLSELVAADPVAGAAAAQQLTLTAASLRAGRRSRTEENSGGVDEEGQQGYGAVAGTRETEDEEELGAEEAQSLQNAAVQGEAADPEVHKRVAAVQVQVQGMEGDWRAYCEHPLSVATAAMLNLQQQHQVPAVSGHSDDPAASYVYEYYKLPEKTADVKLPPTHELWSTGVMGQKLLVQEAPGPGPGPGSANRMEGGEGNGGGGGELHHFLHQYNQQSHSPGQSLQGGLPLPLSPQSLRHDGTSSGGIAGVKREPEDLSSSRGGQQSNKRHKMAQPESPTPPGMYHHHQHQLQVQQQYGSPYDPYSSCSPRLQSAAYTSTSGNPTGNAANPTALHQEATAVYVTGDALPPLASSSSSSLSTTTASYTRYEVVPSSYATTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPPTALHQSSFDYTELCPGGPTAGAAVVLESGAVIHHQPLQLQLQQSHTQAQVQRGTLVAAGATNPNPNPPRSRPWHDFGRQNDADKIQIPKLYSAYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPLLKTGQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEEPPPHPHSYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHSVTERSEFYSMADLHKPPVLFSPPAEHAIDKCFFSRQFSTMELSGFYGGGGGGGGGDTDTSSLSNGEGGGLKAGGSSPYPACGRPSLPALKFHNHFPPDNLSSLHDKKDSLLMQVQELQGSVLQNVQQGNLGSGTVVSGVGNRLHMQQQHLRGTDAEERVMLYVRQESEDVYTPLHVTPPSVQGLLNAIESKYKIASSSINNLYRKNTKGITAKIDDDMIRYYVDEDLFLLEVSHSHVNSDRNPNPGSPGDPGDPGDPPSAGYDVTLIELSSSPTPLPPSPLTVTAAHAHAHSHSHVHSHVHETGNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00879386;
90% Identity
-
80% Identity
-