Chyl004854.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cephonodes hylas
Gene Symbol
-
Assembly
GCA_030295005.1
Location
AP025364.1:5058514-5065706[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 6.5 4.7e+02 2.0 1.0 1 23 54 77 54 77 0.95
2 21 0.14 10 7.2 2.8 1 23 84 107 84 107 0.96
3 21 3.8 2.7e+02 2.7 4.3 1 23 190 212 190 212 0.97
4 21 0.0026 0.19 12.7 1.2 2 23 218 239 217 239 0.97
5 21 2.1 1.5e+02 3.5 1.4 1 23 245 267 245 268 0.94
6 21 0.1 7.4 7.7 3.4 2 22 491 511 490 511 0.96
7 21 3.5 2.5e+02 2.8 1.0 1 23 609 631 609 631 0.82
8 21 1.7 1.2e+02 3.8 0.5 2 23 766 787 765 787 0.94
9 21 0.041 3 8.9 0.3 2 23 866 887 865 887 0.97
10 21 0.19 14 6.8 2.2 1 23 895 917 895 917 0.98
11 21 0.12 8.6 7.5 3.4 1 23 951 973 951 973 0.95
12 21 0.00024 0.018 15.9 4.0 1 23 981 1003 981 1003 0.99
13 21 0.12 8.4 7.5 2.6 1 23 1088 1110 1088 1110 0.99
14 21 0.25 18 6.5 1.8 1 23 1166 1188 1166 1188 0.91
15 21 0.0035 0.25 12.3 0.3 1 23 1194 1216 1194 1216 0.98
16 21 0.0028 0.2 12.6 0.7 1 23 1286 1308 1286 1308 0.96
17 21 0.013 0.97 10.5 1.1 1 23 1314 1336 1314 1336 0.96
18 21 0.0068 0.49 11.4 2.6 1 23 1426 1448 1426 1448 0.97
19 21 0.00017 0.012 16.4 1.4 1 23 1454 1476 1454 1476 0.99
20 21 0.75 54 5.0 2.2 1 23 1567 1589 1567 1589 0.96
21 21 0.0029 0.21 12.6 3.7 1 23 1600 1622 1600 1622 0.98

Sequence Information

Coding Sequence
ATGCTTCAGCAGATGTCCTCGCCGTCGAGCGCACAATTAGGCGAGGTCGCGACTGCCGTGCGCACCTTCGAAGGCCGCGTTGGCGGCGACTTGTCTTCGGGGGCCTCTTCCGATGCCGCCGAAGACTTTGAATTGCCGCACTGCAAGATCAAAAGAAACTACAGTTGCATGAAGTGCACGTATTACACGCAGAACCCTCGCGCTTATCTTATGCACACGCGTGACGTCCACTTtgtgaaattgaaaatttttgatTGCCCACACTGCCTCTACGCTTCGAGACACTATCAGAAACTCGTAAGACACGTGAAGATGGTTCACGGAGGCTCGGCATCCGAAACTACTGCTAGAGTTGAACACGAGCCGTCGACGCCAATCTTAGAAGCTGAAGATATTTCGGAGCGAATGGAGGATATGGTAGAGGAAATCGAAGACACCGAGGACTTACAGATGGAAGTAGAAGATGTCATTGAAGAAACACCAGACCGAACTGAAGAAGCTGATCTCGAAATTGAGAGGATTACAGACACAAGTGCTTTGGACACATCAAAAAATAAAGGGAACTTTTTTTCATGCGATAAATGCAATTATGTGACACATTTACGCGCTAGGTTTACAAAACACGTGAAGTATCATTCTATGCCGATGATCAAGTGTACCACATGCGACTTTCGCACACCTTACAAATGGAACTTGGACCGTCATATGAAGAACCACGGCGGCAGCGGAAGCTTCAACTGTTCCATGTGCAATTTCACAGCTGACATCAAACAGAGTTTGACAGTGCACGAAATGAATCATCACACGCCGCCAGTGGGCTGCACCGGCGCGAGTCGCCGCCGCAATCGAGTCGGCGCGAGCGACCTCTCGCTAGCCGAGGCGGCCAACGCGCTGCTCTCTAAGGAGGAAGAAGGGAGCAGCGACTCGCGATCCTCACATTCGGCCTCGGAAATGGGCCTTCAATACTGCGAAAAAGAAATGATCATGTCAAACAGTGACTCTAATGATGCTTCAATATCAGAAACTGGTATGAAGGACCATCTAAATCAATTTAATGATGATTCAAGAACACAAAAACAGTGCAAGAAAACTCCAAGACCTATCCCCCAACTCATTCCATTAAACGCTTCAACACCcaatcaaaataaaacttcTCCCGGAGAACCACCAGCAAAGAAATTTAAAGAGTCAGTAAATGAAGGTAGTAATGCAAGTACAGAGAGCAAATCTGACAGTCAACCCTCCATCACTTCGCTCAATTTAAAAGAGCCGCGAAAGAAAAATGAATCATTTTTCGATCGTTTAAAAGAAAGACTTCTTACAGAGACTGGAGAAAATGGCTCTCTTACTTGTAAAAACTGTGGCTTTGAAAGCAAATGTTTATCTGAACATTCCGTACATGAAAAAAATTGCTCACCTTTGGGAAATCGTACCACAACAAATACATTAATGTCTAGTTTAAGTTCAACCCGTTGTCAAAACTGTAGACACAGGTGTAAATCGAGTGCCGATCTCCTTGTTCATATGAAAACATGCAGGAAAGCAGAGAAAACTGAAGATATATCTTTTGAAGATACTAAGAGTctagaaaacaatgaaatcgCTTCTAAAGTAGAAAAAGAAACAGAACCTCATCCCATGGAAAACGTAGTTTTTGTTTGGAATAATATAAATCAAGATACATCTAAATTTGATACAcctttagatattaatataaacGATGATTCCACGCTTCCAGAAATGAATAGAAGTTATGATAACGATACAGTCGATGAAAACGAAAGTATGAACTTATCGCCAAGTCAAGCTGTcggaaaaaatgtatttaaatgtccTCATTGTCCTTTCTGGGCCTCAACAGCATCGAGATTTCATGTTCACATTGTgggacatttaaataaaaaaccgtTTGAATGTTCTTTATGCAAATATAAGTCGAACTGGCGTTGGGATATAACTAAACACATAAAGCTAAAGTCAGCTAGAGATCCCGAGCACAATGAAGCCAAAGTGTTGATGACTGATGAAACTGGTAGAAGAAATTACAGTAAATATAGTAAGTTCTTGGCGATGccagttttaaatgaaaatgggGAAAATGAATTCCATTACTTGGATTCAAATACAACTGTTGATGCTTCAATGGAAGTCGATGAATCATTTAGTGACGCGAATGAAGCCACCAATGCTTCCGGTGATATGCAACCTCTAAACCTACAAACTTTGCACACCGAACACAAGTCGGAAGCAATGGATATGAGACAAGCtgataaaaaagttaagaaGACATTGTGGAAGTGCAAAAAATGTAACTATAGaGATCAATCAAAAGAGGCACTACTGGAGCATGTTCGTGAGCACTCACGAGTTGACGGAAATGAAGAAGATGCGAAAAATCTTAATGCAAGAAAACCTGACACCACACCAGAACCTTCAGACTTGGCTTACCGCTGCGGTCACTGCAACCAATTATCTAACTGGAAACACGTCATACAGcGACATTGCCGCTTGAAGCACGAGGGTGTCATAAAAGTCATCACTACAATAAAACCAAAACCAGAGCCGACCTCTATTACAAATGATGCAAACAACGACAAATGTCCGAAATGTCCCTATAAGGCTACAGACAAGAACGTACTTTTAAATCATCTCCAGCAACATCAGCCTTCTACGCACTCAATATTTAAGTGCTACTTCTGTCCGTATTTTGTTAAAGATGAATGTGAGTTAGTGCAACATCTACAACTTCATGGCGTCACAGATCCAGAAGACTACATATCAAAGGCCATGGGATGCAGGTCCCCATTACCAGAACCACAATCTGTAATACCGCCAGGTAACACCAAACGCCATAGATGCACAGAATGTCCTTACGAGACGAACAGCAAGTCTCAATTTATGTATCACGAGCAGTTCCATCGACTGCCACCAGAGACACCTTACAAATGCCCGGAATGCAATTACAGTGTATCTAAAAGGCATTTGCTTCACCAACATTTGAGAGTACATGGTATTATTCCAAAGAAAACTGAAACTGAAACAGATGTGGTTGCCATGCCATCTACTCCGAAAATTGAAAACACTACAGAAACACCTACCAACAATTTGGATGAGACGCCATTTGTTTGGGTTTCGGCAAAAAATGAATTTCACAAAATGTATAAGTGTCGTTACTGTTCATACGTGAACTCGCAGAAATGTAAAATACCCAACCATGAAAAAATTCATTGTTTTACCTTCGAAAACAGTGACGTAACTGTGTATAAATGTCTGGAATGTAAATTTACTTGCGATAATTCGGCAAGATTAGCAGAGCATTCTAAAACTCATGGAGAAATATATGGCCGCATTTATTGCCCAGTTGAAAACGACGTTCCAGATGAGGAACAAGTTGCGAAACTACGCAAAGTTATTGCTTTGGAAAAATCTAACAGTGCTGATGCGCCGCCTAAAGAAGAGCATGGAATgactgaaaataaagaaataaagttattgcatTTCTGTCAACAATGTCCAGCAAGATATTTTACTGAAAGTGAGTTAAAAGTCCACGAAAGCTTCCACAATTGTACGtctttatataaatgtaaacacTGCGATTATTCAGTACCAGAAGATGATGAATTAACATTACACCTTATTGTACACTCCGATGAATATCatactaaaacaaaaatgctGAAATTTGTTCATAATTTACATCCGGTGTATAAAGAGCCCCGGTTGGAACTGATTCATTGCCAAGATACTTTAGATATCGCATGGGTCGTGAATCCTATAAAACAAGACGACCATGAAGTAAGTATTGAAATTCCAGCTAAAAAACACAATGAATCAAAACATGTACCTAAACAATATTATTGCAAAGAATGTCCGGCAAAGTTTTTCAAAAGTTCGGCTTTGAGTTATCACATGGGCTTGCACGGCAGTGAAGGTGAACATAAGTGCAAAAAATGCAGCTATGCCGTTAAAAACGTTGGTAATTTAGCAAAACACGAACTTTTACACGAACAGGAAAATAAAGCAAGTAATTGCGATTATGAATCTGGTGAAGATGTTGACTATAAAAATGTTCCATTATCTGGAACAGATCTGTTTCAGAGGAAAACTGAAGCTCAGAAGAGAGTTTTGATTGACAAGGATAAGCTAGTTAAACCCAATGATCACTTTCCACCAGTACTTCAAGCCGATCCACAGTTTGGTTATCTTATGCATGGAAACCCTGAATTCATTTATCCAACATACTTGAAAAATGGAAGGCAGAAAGAAAAACGTTACAAATGCCACAAATGTCCGTCCGCATTTGAAAAACGGgagcaatataaaatacatcTCTCATTACACGGTTCTAAACAGCGTTATAAATGTGAACTCTGCGATTACTCCGTTAAATATTACGCTAATTATGTCCAACACATGAGAAAACATCAAATGAACGACGAAGCTCAAGCTGAACGAAAAAAAGGCGGTAACGGATTCTCCGAATCGGAAAGTCCTGACATAAAACAAGAAGATAGTTCAGATAACATAAAGCTCGCGATAAAAACAATGCCAAGAGGTACTCCTAGAAGCGATTTTCAGCAATTCTCTATTAGGGACCAGCAAACTCTACGATTACTACAAAGAAGACGATCCATAAACAACTCAGGAAAAGAAACGAGTGCTACAGAAGCGTCACCAACAAAGGAACGCAAGTTACACATGTGTTTATTATGCCCATACACTAACCAGAGACAAGATGCCCTGACAAACCACTATAAGCGGCACGATGATAGCGACGCTCTAACCACGGGTAACCACAAATGCTCATACTGCGACTTGGTTGTGGTCCAATCGCATTTTCTCCGGGAACATTTAAAAACGCATTTTAACTACCATAAAACTCTCACCCCTGAATGCTTCGTGGCAAACGAAAACGTCAGTTTTACCATAACGAAAGTGGATGAAAAAAGTGAGCCAGTTGATCTCAAATTAGATTTCCATGATAAGAACTATAAGTgcaatgatgaaaaaatattcgtaaaaaTTAATACCGGAGAGTTGTTGGTAGAATAG
Protein Sequence
MLQQMSSPSSAQLGEVATAVRTFEGRVGGDLSSGASSDAAEDFELPHCKIKRNYSCMKCTYYTQNPRAYLMHTRDVHFVKLKIFDCPHCLYASRHYQKLVRHVKMVHGGSASETTARVEHEPSTPILEAEDISERMEDMVEEIEDTEDLQMEVEDVIEETPDRTEEADLEIERITDTSALDTSKNKGNFFSCDKCNYVTHLRARFTKHVKYHSMPMIKCTTCDFRTPYKWNLDRHMKNHGGSGSFNCSMCNFTADIKQSLTVHEMNHHTPPVGCTGASRRRNRVGASDLSLAEAANALLSKEEEGSSDSRSSHSASEMGLQYCEKEMIMSNSDSNDASISETGMKDHLNQFNDDSRTQKQCKKTPRPIPQLIPLNASTPNQNKTSPGEPPAKKFKESVNEGSNASTESKSDSQPSITSLNLKEPRKKNESFFDRLKERLLTETGENGSLTCKNCGFESKCLSEHSVHEKNCSPLGNRTTTNTLMSSLSSTRCQNCRHRCKSSADLLVHMKTCRKAEKTEDISFEDTKSLENNEIASKVEKETEPHPMENVVFVWNNINQDTSKFDTPLDININDDSTLPEMNRSYDNDTVDENESMNLSPSQAVGKNVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYSKFLAMPVLNENGENEFHYLDSNTTVDASMEVDESFSDANEATNASGDMQPLNLQTLHTEHKSEAMDMRQADKKVKKTLWKCKKCNYRDQSKEALLEHVREHSRVDGNEEDAKNLNARKPDTTPEPSDLAYRCGHCNQLSNWKHVIQRHCRLKHEGVIKVITTIKPKPEPTSITNDANNDKCPKCPYKATDKNVLLNHLQQHQPSTHSIFKCYFCPYFVKDECELVQHLQLHGVTDPEDYISKAMGCRSPLPEPQSVIPPGNTKRHRCTECPYETNSKSQFMYHEQFHRLPPETPYKCPECNYSVSKRHLLHQHLRVHGIIPKKTETETDVVAMPSTPKIENTTETPTNNLDETPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCFTFENSDVTVYKCLECKFTCDNSARLAEHSKTHGEIYGRIYCPVENDVPDEEQVAKLRKVIALEKSNSADAPPKEEHGMTENKEIKLLHFCQQCPARYFTESELKVHESFHNCTSLYKCKHCDYSVPEDDELTLHLIVHSDEYHTKTKMLKFVHNLHPVYKEPRLELIHCQDTLDIAWVVNPIKQDDHEVSIEIPAKKHNESKHVPKQYYCKECPAKFFKSSALSYHMGLHGSEGEHKCKKCSYAVKNVGNLAKHELLHEQENKASNCDYESGEDVDYKNVPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGGNGFSESESPDIKQEDSSDNIKLAIKTMPRGTPRSDFQQFSIRDQQTLRLLQRRRSINNSGKETSATEASPTKERKLHMCLLCPYTNQRQDALTNHYKRHDDSDALTTGNHKCSYCDLVVVQSHFLREHLKTHFNYHKTLTPECFVANENVSFTITKVDEKSEPVDLKLDFHDKNYKCNDEKIFVKINTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01359347;
90% Identity
iTF_00788129;
80% Identity
-