Basic Information

Insect: Cephonodes hylas
Gene Symbol: ZEB2
Assembly: GCA_030295005.1
Location: AP025388.1:2101363-2105761[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00053 0.038 14.9 0.2 1 23 81 103 81 103 0.98

2 9 0.093 6.7 7.8 2.6 2 23 108 129 107 129 0.97

3 9 3.8e-05 0.0027 18.5 8.6 1 23 159 182 159 182 0.95

4 9 0.00017 0.012 16.4 1.2 1 19 186 204 186 205 0.96

5 9 3.5 2.6e+02 2.8 0.1 6 22 222 238 218 242 0.86

6 9 0.00019 0.014 16.3 0.2 2 23 255 277 254 277 0.95

7 9 0.36 26 5.9 2.2 1 23 283 306 283 306 0.89

8 9 3.3e-05 0.0024 18.7 0.4 3 23 317 337 316 337 0.99

9 9 9.8e-06 0.0007 20.3 1.2 1 23 343 366 343 366 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00053	0.038	14.9	0.2	1	23	81	103	81	103	0.98
2	9	0.093	6.7	7.8	2.6	2	23	108	129	107	129	0.97
3	9	3.8e-05	0.0027	18.5	8.6	1	23	159	182	159	182	0.95
4	9	0.00017	0.012	16.4	1.2	1	19	186	204	186	205	0.96
5	9	3.5	2.6e+02	2.8	0.1	6	22	222	238	218	242	0.86
6	9	0.00019	0.014	16.3	0.2	2	23	255	277	254	277	0.95
7	9	0.36	26	5.9	2.2	1	23	283	306	283	306	0.89
8	9	3.3e-05	0.0024	18.7	0.4	3	23	317	337	316	337	0.99
9	9	9.8e-06	0.0007	20.3	1.2	1	23	343	366	343	366	0.96

Sequence Information

Coding Sequence: ATGAAAAAGAACCATGGCAGAAGAAAGTATTTCAGATCATTTTACTTTCTGAAGAAATACGAATTGAGAAGAAAAGTCAGAATTGACTCAGAAGAGATAAAGAGTTGGGTGGAGAAGGATAGAGAAAGTTGTGTATTCAAGgggtttaaatataaatgtgtaaaatgtgTTTACGGATGGAATGAGGAAGATAAATTCGCTGAGCATAATAAGAAATATCATAATGAGACACCAGAACCCTACACATGTGACTTGTGCGCGTCAAGTCTTAAGTCCAAGTCGTCACTACGCGCCCACATTAACGCCCACAGAACGCTACAAGAGTGCACAGTGTGTTTGTTCCGATGTTACTCGAAAAGTCTCATTTACGCCCACATGAAGAGGCATAAGCGTGCGGTCAGATGCCTTATCTGTGACGCTCCTATGAAAAACATGATGTGTTTCTACAAACACTACAATGACAAGCACAAAACATTTCTATGCGACCACTGTGGGAAATGTTGCAAGTCCAAATACATGCTCGAAAAACATATCAGGAGGTACCACTTCGGCAAGTACCCGTGCGCGAACTGCCACATGTCTTTCAAGACAGCTAAAACGTTAAAAAGGCACACGTGGCTGAAACACCTGCCCAGCACAGCCGAGAACGCGTACTGCGCCCCCTGCGACCTGCAGTACGATACTACCGCTTTGTACCGCCGGCACGTGCAGACCAGCGCGGCGCATGCTGCCGAGAGACGGAGTAGGAACAAAAAGCTGGTCCCGTGCCCAGAATGCAGTAATGTGTATTCCAGAAAATCCTACATGATGAATCATTACAGATATGTGCATGAGAAGCAATGGAAATATTATTGCACGCTCTGCGATCGTCCATTCCTAAATCGCACTAGATATATAGAACACACGAAATTTAAACATGAAGGCGTTATAAGGGAAAAGGACAAGCTGTGCAGTATCTGTGGAAGGGGATTTGCGgCCACAAAAACGTTGATGAATCATATGAGAACGCATTCTGGGGAGAGACCTTTTGAATGCACTAACTGTGGTACTGGGTTTAGTAGGAGAAACTCCTTGATAGCCCACGTAAGAGACTGCCATAGATCAAATGAAAATGAGAGGACTGAACCTACGACCAATGCGGAATAA
Protein Sequence: MKKNHGRRKYFRSFYFLKKYELRRKVRIDSEEIKSWVEKDRESCVFKGFKYKCVKCVYGWNEEDKFAEHNKKYHNETPEPYTCDLCASSLKSKSSLRAHINAHRTLQECTVCLFRCYSKSLIYAHMKRHKRAVRCLICDAPMKNMMCFYKHYNDKHKTFLCDHCGKCCKSKYMLEKHIRRYHFGKYPCANCHMSFKTAKTLKRHTWLKHLPSTAENAYCAPCDLQYDTTALYRRHVQTSAAHAAERRSRNKKLVPCPECSNVYSRKSYMMNHYRYVHEKQWKYYCTLCDRPFLNRTRYIEHTKFKHEGVIREKDKLCSICGRGFAATKTLMNHMRTHSGERPFECTNCGTGFSRRNSLIAHVRDCHRSNENERTEPTTNAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -