Basic Information

Insect: Cephonodes hylas
Gene Symbol: -
Assembly: GCA_030295005.1
Location: AP025361.1:2546887-2551509[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0032 0.23 12.4 2.0 1 21 332 352 332 355 0.90

2 10 2.2 1.6e+02 3.5 0.1 3 23 382 402 380 402 0.88

3 10 0.024 1.7 9.7 1.0 2 23 425 446 424 446 0.96

4 10 0.00093 0.067 14.1 1.3 1 23 450 472 450 472 0.95

5 10 0.0086 0.61 11.1 5.0 1 23 479 502 479 502 0.97

6 10 0.00026 0.019 15.8 1.4 2 23 510 532 510 532 0.96

7 10 3.4e-05 0.0024 18.6 1.6 1 23 539 562 539 562 0.97

8 10 0.00046 0.033 15.1 0.8 1 23 568 590 568 590 0.98

9 10 1.9e-05 0.0013 19.4 5.3 1 23 596 618 596 618 0.98

10 10 0.0092 0.66 11.0 0.6 1 20 624 643 624 647 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0032	0.23	12.4	2.0	1	21	332	352	332	355	0.90
2	10	2.2	1.6e+02	3.5	0.1	3	23	382	402	380	402	0.88
3	10	0.024	1.7	9.7	1.0	2	23	425	446	424	446	0.96
4	10	0.00093	0.067	14.1	1.3	1	23	450	472	450	472	0.95
5	10	0.0086	0.61	11.1	5.0	1	23	479	502	479	502	0.97
6	10	0.00026	0.019	15.8	1.4	2	23	510	532	510	532	0.96
7	10	3.4e-05	0.0024	18.6	1.6	1	23	539	562	539	562	0.97
8	10	0.00046	0.033	15.1	0.8	1	23	568	590	568	590	0.98
9	10	1.9e-05	0.0013	19.4	5.3	1	23	596	618	596	618	0.98
10	10	0.0092	0.66	11.0	0.6	1	20	624	643	624	647	0.94

Sequence Information

Coding Sequence: ATGGCTACAACAATTAATGAGATTAAGACTTATTTTGGTAGATGTAGATGTTGTTTGGAATTTGGTTACTTGAAAAATATGTGGACTGTACATCATTGGGAGGGAGACACTGAAATATACGGAGATATGATAATACAATGTTTCGCTTTCactTTGGAGAAGCCAGATTGTGTTGATCAAGATCAGATCTGTGAAACATGCATAACAAGGCTGCGGGATGCATTTAGCTTTAAAAACCTTTTAGTCAAGTCACAGAAGATGTTGCAAGATGGGTTAAAAGATGGAGAAATTGTACCAATAAAATTGGAGAATATAAAACCAGAGACATCTCTTGCTGTTGATAGTGATACAGCCAATGACACACAGGATGAGATTGATAAGGAAATTGAGCTTGATATGGATGAAATGGATGAAATTAATGATACAGGAGTCCCTATGAAAGAGGATCCTGTGTATGAACAAGTTGAATATTTGGAGGATGAAATTGTAGACAACCCAAATACAAATGCAGTTACCCAGCAACCCATCGAGTCCGACGAGAGTGGTCCGTCTAAAAGAAAATGGCCCAAAAAGCTCCCTCGAAACCTGAGGAATAAAACATATCTGCAGTATACAGAGGATGATATGCGAAAGGGCATAGAGGCAGTGAAATCACAGAAAATGACTATGTCTGAAGCGGCTGAGTACTATAATGTGCCGAGGAAAACTTTAACAGCCAAATTGAAGAACGAATCAGAGAaTGTACCGGACGCAAATAATAAGGAAAATGCGTCTTTAGATAAAAAGGAGAAAAAACGCACGGTTGCTCCTAAGAGGAATAAAAACACGCTTCGGCCAAGAAAACGCACGCGAAAAATAATACCTGAAGACGCACCTAAAGATGAGAAAGAAGAAAGTGCCGCCTTACAAGAAATGAGGAAACACAAAGATAATATAGACTCCATATTACTGTGGTCGAATGCGACCATGATTAAAGGACAGTTGGGCGGCGACTATACGTGCTGTTTTTGCTCTGAAAAATTTCCGTCACCAGCCGAACTCAAACGGCACAATCTCGACACTCACGAGGATGCCCACTCTAAAGCAATCCACGTGAAATATGTATCAGATTTGATAATCAAGTTGGATATCACCAGTCTTCGGTGCATAGTCTGCGGTACGAAGATCGACTCATTAGAACTGCTCATGAAACATCTCGTAGAACATAAGAAAGTAATTCACGGCGACATCAAGAATCATATAATTCCGTTTAAGTTTGAAAGTGAAAAGTTACAGTGCGCGGTGTGTAGCAAACAGTATCGGTTTTTCAAAACGTTATCGGAACACATGAGTGAACATTATTCCAATTTCGAGTGCGCTTTATGCGGCCGTCGTTTCATTAACAAACAGTCCATGCAGACGCACAGCTATCGGCACCAGAAGAACGTAGGCGTGTTCAAGTGCTCGCATTGTCCTAAGGAGTTCGATACACGACATAGACGAAGCGCACACGTCCGAAAGATCCACCTTCACGGCAGTAAGACTAGGAAGTGCCATGTATGCAACGAGAAATTTTCTTCGAGCCCACAAGTACAGAACCATATGGTGAAAGCACATGGAGCCAAACCATTAGAATTCAAGTGTGACGCGTGTGACAAGTCCTATACCAACCCAAGCTCCTTGAGTCTTCACAAAAAGAGATTCCATCTGATGTTGCGGCCCCACAAATGCACAATATGTGAAATGGCGTTCTTCTCCAAAGTGGAGCTGGGTACGCATATGGTGACTCACACCAAGACCAAAGAGTTTCAGTGCGAGATATGCGACAAGCGTTTCGGAACCAAATGCTGCTTGAACCAACACATGCGAGCTCACTTTGGCATCAAGCGCTACAGATGTGACTGGTGCGATCTGAAATTTGCGGCGAGATCTAAGATGAAAATTCACATGTGGAAGAAACATAGAGAGGTCGTGTGA
Protein Sequence: MATTINEIKTYFGRCRCCLEFGYLKNMWTVHHWEGDTEIYGDMIIQCFAFTLEKPDCVDQDQICETCITRLRDAFSFKNLLVKSQKMLQDGLKDGEIVPIKLENIKPETSLAVDSDTANDTQDEIDKEIELDMDEMDEINDTGVPMKEDPVYEQVEYLEDEIVDNPNTNAVTQQPIESDESGPSKRKWPKKLPRNLRNKTYLQYTEDDMRKGIEAVKSQKMTMSEAAEYYNVPRKTLTAKLKNESENVPDANNKENASLDKKEKKRTVAPKRNKNTLRPRKRTRKIIPEDAPKDEKEESAALQEMRKHKDNIDSILLWSNATMIKGQLGGDYTCCFCSEKFPSPAELKRHNLDTHEDAHSKAIHVKYVSDLIIKLDITSLRCIVCGTKIDSLELLMKHLVEHKKVIHGDIKNHIIPFKFESEKLQCAVCSKQYRFFKTLSEHMSEHYSNFECALCGRRFINKQSMQTHSYRHQKNVGVFKCSHCPKEFDTRHRRSAHVRKIHLHGSKTRKCHVCNEKFSSSPQVQNHMVKAHGAKPLEFKCDACDKSYTNPSSLSLHKKRFHLMLRPHKCTICEMAFFSKVELGTHMVTHTKTKEFQCEICDKRFGTKCCLNQHMRAHFGIKRYRCDWCDLKFAARSKMKIHMWKKHREVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00290615;
90% Identity: iTF_00290615;
80% Identity: iTF_00290615;