Basic Information

Insect: Cephonodes hylas
Gene Symbol: -
Assembly: GCA_030295005.1
Location: AP025361.1:2540298-2546345[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.16 11 7.1 3.5 1 23 86 109 86 109 0.92

2 16 0.83 59 4.8 1.8 2 23 135 157 134 157 0.94

3 16 0.0042 0.3 12.1 3.1 2 23 179 200 178 200 0.96

4 16 0.0065 0.47 11.4 2.0 1 23 204 226 204 226 0.97

5 16 0.03 2.1 9.4 0.6 1 23 231 254 231 254 0.94

6 16 0.0017 0.13 13.2 0.1 2 23 262 284 261 284 0.92

7 16 0.0077 0.55 11.2 0.5 1 23 291 314 291 314 0.94

8 16 0.017 1.2 10.1 0.9 1 20 320 339 320 341 0.93

9 16 0.032 2.3 9.3 0.9 1 23 386 410 386 410 0.94

10 16 0.034 2.5 9.2 0.3 2 23 482 503 481 503 0.97

11 16 0.18 13 6.9 0.1 1 23 507 529 507 529 0.97

12 16 0.00033 0.024 15.5 1.2 1 23 534 557 534 557 0.93

13 16 0.0021 0.15 13.0 2.3 1 23 562 585 562 585 0.94

14 16 0.0036 0.26 12.2 2.3 1 23 592 615 592 615 0.98

15 16 0.00047 0.034 15.0 1.2 1 23 619 642 619 642 0.94

16 16 0.0004 0.029 15.2 2.5 1 23 648 670 648 671 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.16	11	7.1	3.5	1	23	86	109	86	109	0.92
2	16	0.83	59	4.8	1.8	2	23	135	157	134	157	0.94
3	16	0.0042	0.3	12.1	3.1	2	23	179	200	178	200	0.96
4	16	0.0065	0.47	11.4	2.0	1	23	204	226	204	226	0.97
5	16	0.03	2.1	9.4	0.6	1	23	231	254	231	254	0.94
6	16	0.0017	0.13	13.2	0.1	2	23	262	284	261	284	0.92
7	16	0.0077	0.55	11.2	0.5	1	23	291	314	291	314	0.94
8	16	0.017	1.2	10.1	0.9	1	20	320	339	320	341	0.93
9	16	0.032	2.3	9.3	0.9	1	23	386	410	386	410	0.94
10	16	0.034	2.5	9.2	0.3	2	23	482	503	481	503	0.97
11	16	0.18	13	6.9	0.1	1	23	507	529	507	529	0.97
12	16	0.00033	0.024	15.5	1.2	1	23	534	557	534	557	0.93
13	16	0.0021	0.15	13.0	2.3	1	23	562	585	562	585	0.94
14	16	0.0036	0.26	12.2	2.3	1	23	592	615	592	615	0.98
15	16	0.00047	0.034	15.0	1.2	1	23	619	642	619	642	0.94
16	16	0.0004	0.029	15.2	2.5	1	23	648	670	648	671	0.95

Sequence Information

Coding Sequence: ATGGGAATTCTATTGTTCGTAGATGACCTGGAAAACAATAGAAGTGACCAATACCTTGGTCGTTTGGAAAATGTTCTTGAACCATCGAAATTTCACGATTTCGCTGGTCAAATCCAAACCCGAGCTAAGAAATCAAATGAGATGAGTGGAGAAAGTAATGATGAGGCCATCGAACTGGGcaaacaaaaacacaacatAAGTGTAATCATGAAATATTCAAACGCGACAGTTATCAAGACTTACTGGAATTCCGGCTACTTGTGCTGTTTCTGTCGCCGCCAGTTTGCGCTGCCTTATCAGttgaaaaaacacaatttgagAGACCATAAATATGCGTATTTCAACGttataaaaggaaaaaactTAGACGAAATAAGAATACTCTTGGACATCACAGAACTCCATTGCAATGAATGCAAATCTAAGATCGTCTCCTTgaacaattttgtaaagcaCTTGAAGTATATTCACAGAGAGACTATCCACGATGTTACTGACTACATAATTCCGTTCAAGTTCGATACGGACGAACTGCAATGTGCTTTATGTAAGAAGCAGTTTGAACATTTCAAATTACTGAGCAATCACATGAACCAGCATTACAAGAATTTCGAATGTACATTTTGCGGGCGttggtttataaataaacgcACTTTGCAGTTGCATACATTTAGGCACAAAGACGGCGCTTTCGAGTGTCCGTACTGTTCGAAATTGTTCGAAAGTATGAAGAAGAGGAACGACCACGTTCGCGGGGTGCACTACCTGTCCAACAAGACTATGAAATGCCCTCTTTGCGGCGAAACGTTCGAAACCAACATGCAAGTAGAGGAGCACAAGATGGACGTACACGGTCTCGAGTGGCGGCTGTACGCGTGCCAACCTTGCAACATTTCTTTCATTAACGAAACGTACTTACAAGCCCACAAAAAGAGATTCCATTCCTTATTGCGACCCCACAAGTGTGTTTTATGCCACATGAGTTTTTATTCAGAAGTCGAGCTCCGCATGCACAAAGCAACGGGAGCAAGTGATAAAATTTACGTATATTTCGAAAGCGACCCCGACCGCGAGGAGAGGTTCAAGTTCCTGACAGAAATAAAGACTATATTGTCTTACACCAACGTCACTCCTTACAAGAGCCGAGTCAGCCGCTTCTGCTGCGCCTACTGTACCGATGAGATTTTCGACAACGCTGAAGATCTGCGCAACCACACGCGCAGAGTGCACATGGACGACCGGACGAAGAAAGTGGACCTCATGATGCGCCCGTATTGGATGAACGAGATTCTCAAACTGGACATCGAGAACCTGCTGTGCGTCGTGTGCTGCGTACCACTGTACAACTGGACAGAAATGTTCCAGCACTTGGAAGAGAAACACGACGTCATTCTCGATCTGGCGTATCGAAGAGTAGTGCCTTACGTGTTAGGAAGCGAGCTGAAGTGTGCCCTGTGCAAGCAGGTGTTCATGAACTACCTCCAGCTGGATGGACACATGAACTCGCATTACAACAACTATGTGTGCGTAGATTGTGGCGACACGTTCCTCACCGGGCCCAGGTTAAAAAGTCACATGAAAATACACATGGTGGGGAAGTTCCCCTGCCCCTACTGCGACAAAGTGTTCAACTTGCAACACTACAGAAAGAAACACGAAATCGTAGTGCATAGTAACTTGAACTACAAGTGTCAGTATTGTGTCCAGAAGTTCAGCAGGGAGAAGGAACGTAACAAGCACATGGCAGATAAACACGCGGATAAAATGGAAGTGTTCACTTGTGACCAGTGCGGCAAGACCCTCAACTGGCGCCATGAATTTTTGAGCCATATGAGAAAGGTGCACGGCAAGAAGTTCGAGTGTCCAGACTGCGGGAAGCGGTTTTTCCAGAAGTGCGATATGGATGGCCACATCGCCTCAAAACACACGGGGGAGAAGAACTTCATGTGTGTTTGGTGCCACAAGAGATACTCGTCGCGACCCGCGCTCGCCATGCACCTAAGATCCCATCACAAAAATGAACAACAACAAATCACATGA
Protein Sequence: MGILLFVDDLENNRSDQYLGRLENVLEPSKFHDFAGQIQTRAKKSNEMSGESNDEAIELGKQKHNISVIMKYSNATVIKTYWNSGYLCCFCRRQFALPYQLKKHNLRDHKYAYFNVIKGKNLDEIRILLDITELHCNECKSKIVSLNNFVKHLKYIHRETIHDVTDYIIPFKFDTDELQCALCKKQFEHFKLLSNHMNQHYKNFECTFCGRWFINKRTLQLHTFRHKDGAFECPYCSKLFESMKKRNDHVRGVHYLSNKTMKCPLCGETFETNMQVEEHKMDVHGLEWRLYACQPCNISFINETYLQAHKKRFHSLLRPHKCVLCHMSFYSEVELRMHKATGASDKIYVYFESDPDREERFKFLTEIKTILSYTNVTPYKSRVSRFCCAYCTDEIFDNAEDLRNHTRRVHMDDRTKKVDLMMRPYWMNEILKLDIENLLCVVCCVPLYNWTEMFQHLEEKHDVILDLAYRRVVPYVLGSELKCALCKQVFMNYLQLDGHMNSHYNNYVCVDCGDTFLTGPRLKSHMKIHMVGKFPCPYCDKVFNLQHYRKKHEIVVHSNLNYKCQYCVQKFSREKERNKHMADKHADKMEVFTCDQCGKTLNWRHEFLSHMRKVHGKKFECPDCGKRFFQKCDMDGHIASKHTGEKNFMCVWCHKRYSSRPALAMHLRSHHKNEQQQIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -