Basic Information

Insect: Cephonodes hylas
Gene Symbol: L
Assembly: GCA_030295005.1
Location: AP025362.1:7630718-7634829[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.56 40 5.4 5.8 1 23 3 25 3 25 0.97

2 16 5e-06 0.00036 21.2 5.1 1 23 31 53 31 53 0.99

3 16 2.3e-05 0.0017 19.1 0.1 1 23 59 81 59 81 0.98

4 16 2.5e-05 0.0018 19.1 0.6 2 23 97 119 96 119 0.95

5 16 0.86 62 4.8 0.2 9 23 150 165 146 165 0.96

6 16 0.33 24 6.1 0.1 3 23 218 238 217 238 0.97

7 16 6.5 4.7e+02 2.0 0.0 3 13 253 263 252 265 0.86

8 16 0.0011 0.078 13.9 0.9 1 23 281 304 281 304 0.91

9 16 0.029 2.1 9.4 0.1 1 23 309 332 309 332 0.92

10 16 0.0042 0.3 12.0 0.3 1 23 390 414 390 415 0.94

11 16 0.00018 0.013 16.4 0.1 2 23 477 498 476 498 0.96

12 16 0.051 3.7 8.6 0.0 1 23 506 528 506 528 0.98

13 16 0.23 17 6.6 1.6 2 23 536 557 535 558 0.94

14 16 1.2 83 4.4 0.6 1 23 632 654 632 654 0.94

15 16 0.0088 0.63 11.0 0.1 1 20 662 681 662 684 0.95

16 16 0.09 6.5 7.9 0.3 1 23 691 713 691 713 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.56	40	5.4	5.8	1	23	3	25	3	25	0.97
2	16	5e-06	0.00036	21.2	5.1	1	23	31	53	31	53	0.99
3	16	2.3e-05	0.0017	19.1	0.1	1	23	59	81	59	81	0.98
4	16	2.5e-05	0.0018	19.1	0.6	2	23	97	119	96	119	0.95
5	16	0.86	62	4.8	0.2	9	23	150	165	146	165	0.96
6	16	0.33	24	6.1	0.1	3	23	218	238	217	238	0.97
7	16	6.5	4.7e+02	2.0	0.0	3	13	253	263	252	265	0.86
8	16	0.0011	0.078	13.9	0.9	1	23	281	304	281	304	0.91
9	16	0.029	2.1	9.4	0.1	1	23	309	332	309	332	0.92
10	16	0.0042	0.3	12.0	0.3	1	23	390	414	390	415	0.94
11	16	0.00018	0.013	16.4	0.1	2	23	477	498	476	498	0.96
12	16	0.051	3.7	8.6	0.0	1	23	506	528	506	528	0.98
13	16	0.23	17	6.6	1.6	2	23	536	557	535	558	0.94
14	16	1.2	83	4.4	0.6	1	23	632	654	632	654	0.94
15	16	0.0088	0.63	11.0	0.1	1	20	662	681	662	684	0.95
16	16	0.09	6.5	7.9	0.3	1	23	691	713	691	713	0.94

Sequence Information

Coding Sequence: ATGCCGTTTCGCTGCGAATTCTGTTCGCGTTTATTCAAGCACAAGAGGTCTCGTGACAGGCACGTCAAACTGCACACCGGCGATCGCAAGTATCGCTGCTCCCACTGTGAATCTGCTTTCTCGAGAAGcGATCATTTGAAGATCCACATGAAGACTCACGACAACCAGAAACCGTTTCAATGCACGGTGTGCAACCGCGGGTACAACACTGCAGCGGCGCTCACGTCCCACATGCAGGGACACAAGCGGGACCGCGAGGGGCGCGACTCCGACCGTAGGCGACCTCTGCGATGCCTCCGATGTGGGGAGGTCTTCCGACATCCTGACCTTCTTCAGACTCACATGACGAGCGCGCACGGAATAGACGCGGCCGCCATGACTCCGCCACAACGCGTCTCGTCGCAACCGCCACCCACACTACTCGCCTGTATTTATTGCACACGAGACACATTTACTAGCATGGAGCAACTGCAATTGCATGTCAGGACGGCCCACTCGGCATTGTTAAACGGCGAATCGCCCATACAAGGCGTAGATCAGCCGGCACCCACAGATCTGAGCAGACGAACGACTGACGACGGCCCTGCGGTGAAACGTCCTCGTTCGGACTCCGACACTCCGCAGACGACATTGTCACCCAGCACTCTACTCTGTAATCAGTGTGATGCAGCTTTACCAGACTTTGAAGCATTCCGGACCCATTTAAAAGCTCATCTAGAGGAGGGTGGAGAGTTGACACGATCGAGTCCTGCTCCGTGCGTCCACTGCGGATCAACGTTTGCGGACGCGGCAGCTTCGGAGCGATACCTGACCGCACACTATCTGGCCGTCTCTTGTGAATATTCTTGCCACAGCTGTGCACGCAGTTTTTCGGCACCTGACGATTTACAAAAGCACCTTTTTGATCTACATGCTCATCATCTATATCGCTGTTCGTTgtgtaaagaaatatttgactCCAAAGTGGCTATACAGGTTCATTTCGCTGTCGCACACAGCGGCGAGAATAAAGTTTGGGTTTGTCGCTCGTGCGGTGGTGGCGCCGGCTCGCTGCGATCCGAGGCAGAGGGAGCAGCGCACGTGCGCACGCGACACGCTGCCGGTGCAGCAAGATGTGCTTGCGGCGCCCTGTTGGCTGGACCAAGGCACGCACGCCCCACAAGACCTTACCGCTGCCCCGTACCCGCCTGCACAGACACCTTCGCCGTGCAGTACCTCCTTGAACGACATATGCAAATGCACCATACCATACCCCATCAGgtgTTAAATGGTGAAATGACCAGAGTTAAAcgtatagaaaataataacgGTGGTGAAGGCGTAGATGAAGCATGCTCTCCGTGTATCACGGGGGCAGAAAATGCCGGTGTCAGTGCCGCTCCTGGAGGAAGTGAAGAGAGGCGGCGTAAAAATGGTGCAGTGGCATTACAGTGCGCATATTGTGGAGAAAGAACTCGCAGTCGCGCTGAACTAGAGGCACATACGCGTGCGCACTCCGGTGCAGCCGCCGCTCGACATAAATGCCTCATTTGTGACGAAGTCTTGCCTTCCGCTGCCGTGCTCGCTGAGCATAAGCTCACCCATTGCAAGGTGGTGGCCGGAGATACATGTTCCCGATGTCGCGCTCGCCTCTCCTCGGAGGAATCCTTCTTGAACCATATGGCTCGTCATCATCCGGCCCTCCCTGCGCCATGCGTCGTCTGCCGGCAAACACTAGCCTCAGAAGCTGAAGCCCGCTTGCATGCGCGGTTCCACTTGCGTCCTAGCGAAGACGAACAGCGTTGTGCAATATGTCTCCGGGCTCTACCTGAAGGTGAAGGTGGAGATGGCGCAAGAGCTTGTTCCGCCTGCTACGCGCGACACGCGGCACCGCGACCGCCGCCTCCCGCTGACCACGACTGTCGGCTGTGTCGACGTGCATTGGGCTCACCCACAAGACTACAAACACATCTCATTGAACACACATTTGCTGGCATTGGAGCGTTCACATGCTATTTATGTTCGGCGGTATTCACAAGCGCGATTGGCTTGCAACGACATTTGCCTGAACATGCTTCCGCTCCACGGCCTTACGACTGCGGGCGTTGCGGGCTCAAGTTCTTTTTCCGGGCGGAATTAGATAATCATGCTTTCGTACATTTGGAAGAAGCGGAAATAGCGCAACGAGCATTTTATGAGGCTTATGCAAGAGGAGCAGCCACGGCTTGGGCGGCGCTCGCACCACCGGAAGCTCCAACGCCTTTGACTACACCGATACCACCTCCATCCGAAGTAAAGCAAGAGCCTGAGATAAAGGAAGAGCGTAATGATGAATACATTGAGGTATCGTCCCCTCCCCCCGCGGCCCCGCCGCCGTCCGCCGGGGCGACCAGTCCGCCCGCGGTGGTAAAGCAAGAGAAACCCGACGAAGACTGA
Protein Sequence: MPFRCEFCSRLFKHKRSRDRHVKLHTGDRKYRCSHCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQGHKRDREGRDSDRRRPLRCLRCGEVFRHPDLLQTHMTSAHGIDAAAMTPPQRVSSQPPPTLLACIYCTRDTFTSMEQLQLHVRTAHSALLNGESPIQGVDQPAPTDLSRRTTDDGPAVKRPRSDSDTPQTTLSPSTLLCNQCDAALPDFEAFRTHLKAHLEEGGELTRSSPAPCVHCGSTFADAAASERYLTAHYLAVSCEYSCHSCARSFSAPDDLQKHLFDLHAHHLYRCSLCKEIFDSKVAIQVHFAVAHSGENKVWVCRSCGGGAGSLRSEAEGAAHVRTRHAAGAARCACGALLAGPRHARPTRPYRCPVPACTDTFAVQYLLERHMQMHHTIPHQVLNGEMTRVKRIENNNGGEGVDEACSPCITGAENAGVSAAPGGSEERRRKNGAVALQCAYCGERTRSRAELEAHTRAHSGAAAARHKCLICDEVLPSAAVLAEHKLTHCKVVAGDTCSRCRARLSSEESFLNHMARHHPALPAPCVVCRQTLASEAEARLHARFHLRPSEDEQRCAICLRALPEGEGGDGARACSACYARHAAPRPPPPADHDCRLCRRALGSPTRLQTHLIEHTFAGIGAFTCYLCSAVFTSAIGLQRHLPEHASAPRPYDCGRCGLKFFFRAELDNHAFVHLEEAEIAQRAFYEAYARGAATAWAALAPPEAPTPLTTPIPPPSEVKQEPEIKEERNDEYIEVSSPPPAAPPPSAGATSPPAVVKQEKPDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01437318;
90% Identity: iTF_00341544;
80% Identity: -