Chyl021242.1
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- -
- Assembly
- GCA_030295005.1
- Location
- AP025387.1:386815-397104[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.2e-06 0.00016 22.4 4.0 2 23 1425 1446 1424 1446 0.97 2 13 5.9e-05 0.0043 17.9 2.5 1 23 1455 1477 1455 1477 0.97 3 13 1.8e-05 0.0013 19.5 1.2 1 23 1483 1505 1483 1505 0.98 4 13 0.0021 0.15 13.0 3.0 1 19 1511 1529 1511 1532 0.95 5 13 8.6e-05 0.0062 17.4 0.6 1 23 1539 1561 1539 1561 0.98 6 13 0.12 8.5 7.5 0.6 1 20 1567 1586 1567 1588 0.93 7 13 0.0052 0.37 11.8 1.0 2 23 1651 1672 1650 1672 0.94 8 13 3.4e-05 0.0025 18.6 1.2 1 23 1677 1699 1677 1699 0.99 9 13 0.00023 0.016 16.0 1.9 1 23 1704 1726 1704 1726 0.97 10 13 0.0077 0.55 11.2 2.0 1 23 1731 1753 1731 1753 0.95 11 13 2.7e-05 0.0019 18.9 0.9 1 23 1758 1780 1758 1780 0.98 12 13 3.2 2.3e+02 3.0 2.6 2 23 1787 1808 1786 1808 0.89 13 13 0.0041 0.3 12.1 0.1 1 21 1814 1834 1814 1835 0.95
Sequence Information
- Coding Sequence
- ATGTCGGTATTGATCGACATAGTGCCAGATATAGAGCCTATATTTTCGCGCGAAGGAATAAAATTCACTTACAAACGTCAAACGAAAGCTAAATCCAGAAAAGTGGAGGGCACCGTGGAATATGAGGAGCAATTGGCCAGGCTTCAAGATGAAATGGAGTTACGAGCAGGCATCTGTGGGAGAGCCAAACTGGACTTTGAAAACGATGATGAAGACAATGCATTTGCCATGGACATAGACGACGCAATTAAACCAGAGACGTATCCTAAATCCAATCCAATTGACTGCATTATTGATGAGAAAGTGCTAAACCTGATAGACGAAGAATGGATGTGTTTCACAGGAGCTATGTTTTATAGTATGGACGAAATTGAGCATTGGAGACGGTTGAGAGATAATTCATACGATTATAAGAAGTTTTTCAATAACAACAATATAGATAACGATAACGTTGAGAATAAAGATCATGAAAAAGCGAACGAAAATACATGCAAAGATCCAGAAACCTCAAACACGGTCAAATTTGAGGGAAGCACTCAGAATAATGACGAAAGTTACTCTGAGATGGTTAAAAGGGAATTTTCTGAACTGTTTGAAGAAAATAACAACGAAATCGcCCCTATCAATGCAGCAGACCAACTTACCAAACCAGAACAAGAACCCCAAGAATATGGTCGACGGAACCACGTGAGAACCGTTCCAAAACCAACATGTAACGATATCTTTGAAAATATCAATCCTGGGCCACAGATGAATCCATTAAAAGAAGAACAAATAGATGATACAAAACATAAAGAACCTTTGAAAGTTAGTAACGAAGAGAATTACAAATATGGAATTTATGACGATACTATTAACATAGACTCAAAAGATTGTCGTGAAGTTATTGAAGTTGAAACCAAAGACTACAAAGAAAGTTCACAATCCAAGGATGTTATAGACgaaaataacatacataaccAGCTGAAAtctgaagaaaaacatcgaaaACATAGGAAGAAGAAACACCataagaagataaaaattaaaaatgggcATGTAACTTTAGATAAGGATGGTAATGAACCTCCACAAGAGCTAGACAAGGACaaggaaaaaagaaaagaaagtaaAAGAAATAAGATTTTGGCACCGATAATAACAGATGCACATACCAAAGAAGAAACTAATAATGAAAAAGCCACAgataaaattgttgatattaGGATAAAAGCCGAAGAAGGAAAAATAGACTTAAAAGAAAGTGTTTCTGGAGCTTCTACTGTATCAAAAAGTAAGAAGAAAGATAAAAAGCATCGTCATAGAAAGGATAAACACAGAAATAAGGAAAAAAGTGATACTAAAATCGTTAACAATTCCATCACGACGCTAGTTGAGAAAGTCAAAACAGAAGAAACAGTCAAACCTGAAAGAAAATCACATAAACACGATAAAAAAGATCGGGAAAGATCAAAATCGCATAATCCTAAAGAACTTGAAAGACATTCTCTAGTGGAAGATATCAGAAAAGATCTCAAGAAATCGCGGAATGACGAAACAAAATTGAAAGATCATAATCAAAACAACACGACTCCGGATGTGAACATAAAGACATCCGAAGAACACGTAAAGAAAGAACACTCTGAAGGTAAACATAGCACAAAAGAACGAAAACACAAGCATCGTCATAAGAAATCACGAGATCATAAACAAAGGAGTTCTCATGAATCTGATAAGCACAAAACAGATTTGACTCAAGATAAAAAGATCAAAGATGACAATCATTCGAAAGTGAAGAATGAAGGTCCCGAAAATGTTAAAGCAAGCACTTCTAATTCACAACCAAACATGGATCTTGTTCTTAAAAACGAAAATGTAATAGAGAATCATAGACAAGAGGATATAGGTGGAGGTGGGAACGAAAAAAGGTTGAATATTATTGAGGATGACGTAGAAGCGGCTATAGAAAGACTTTTTATTGACCCAACTGCAATCCTGAATGAATTTATCACCGAAGAAATATGTAGCTGTGTAAAAGAATACTGGGAGAGCTATTCTAACGCGAACATTGCAACTGAAATTAAACAAGAATCTCCTGTTAAGAAAGTTGAAAAACCAGACGATATCCAAGCATCTGATGACGATGTCATTGAAGAAGAACTACGAAAGCTCATCAACAAACAGTTACAAAACTTTGCGGTTGACGTCCGCATTGGCAACGAAGACTTGTCCATTTTCAACGCAAATACCCCTAAAACTAACCAGGCTAATGGAAAAATTAAGGATGAATTTTCATCAAACGATACACCTGATGCTTGTCAAACAAGCAATCAGCAACAACCGGATAAATCGCCTAAAAAGGAACGCGACGTACTCCCTGTACCTAAAACTGAAACTGATGTAAAGCAAATACAAGAGGGAAGTTCTGATGCTAAAAAAGATCCTGAGGAAATTTCCCAATCCgattctaaaaaaaagaaacacaagcATTCCAAATCGAAGCACAAATCTAAGAAAGATAAAGAACGTTCAAATTCTAAAGACAAATCTGAATCTAAAGAACATAACAAGCATTCCGATTTGAAACATAGGCATCATAAAAAGAAGAATAGAGACAAGCATTCTGAATCTAAATCTAAAGATCACTCAAAACAAGAAGAATCCACTATCAAAACTGATTTAAAACCAAAATCAGAACCAATTAAAGAACTTCAGGCAGAAAGAGAGAATTCTAAGCTCAAAGATCAAGATAAGATTCCTAAGATAAAAGAAAGCAGTCATAAACACAAATCCATCTTCAGTGATGAGCAAAAACCCAATTCAGACTACAAAAACCCAAAAACTGAGCAAAATTTACAGCAGCTAAATTCCGAAGCTAAAAACAATATTGAGATGAAGCCACCTTCTCAAATGGAactccaaataaataatagacagGAAGTATGTAAACCCAATCAAGAAATTAAACCGCCAAATGATAAAGCTAGCGACTATTCAAAAGATTCAAAACGCAAAGATGACCATCATAAGTCCAAACATAAATCAAATAAGGAAGAAAAAACCACAACCAAACCACAATTAAAAATCATAGAGACACTAAACTTATCCAAAGATGTAATGAGGTCGCATTATGAAACCAAAGAGCAAACGACATTTACAGAAACAAATTTAAAGAATAAGGAAATTCAGACTCCACAATTGCCAGCCAAGATACAACCAACAAATAATCAAAGTCCTAAATCTAAGCCACTTTCACCGATTAAAGtgagaataaattataaatcattaaataccGAGAATAAGGAAAAGTCACAAGGTGAATTGAATTCAAATGCCAATAATCAAGGCATATTAAAATCTACATTAATTTCACCCTCTGAAAGCAAAGAGAATTCTGGCTTGGAGCCACAACCCCAAAATGGGACAAAATCTGAACCCAAACAAAACAAACCaattatactaaaaattaaatCCGGAAATTTGCATATGAAAAGTAAAGATCAGGAAGAGAAGACTAAATCTAAGGCAATACCAAGTGCTATAGATAAGAAAGAAAATTCTAAGATAAAATTGAAAGAAACAGACAAGGAAGCAGACAAGAAATCACTGTCCGATAATAAAGAAAAACGAGATAAACCGCAACCAAATTCTGAATCAAGAACTGAAAGtgttaaatctataaaaaaaacagatcCTGTAGATTCCAAAGCAGATCAAAGTTTATCCATCAATGAAGATGAACAAAAATCTAATACTAAACAAGAAGACGATAAAAAATCAACTCCCAAAAGCAGAAAACGAAAACACAAATCGGAAAATAAAACACAGTCTAAAAATGACacagtttcaataataaaagaAGGGTATGAACATAACACATATTTGTCTTCTCGAATAGTGTCAGAGGATGGGcacactaaaattaaaataaaaaggcgTTTAAATGTAGAAGAAGCTCCCAAAAATCCTGCGCCTGCAGAAAAATCTAATTCCAATCAGAAAATACACACATCTTCCGTAATCGATGACCCAAAAACCAATGACGAATTACTTTATGAACCAAAACCTAAACGTGCAAAAACGAATAAAGAGTCAGACATTAAAGTACCTAAAAATGATCACATTCTACAATTAGCTCCCTTAGATTCCGAAGAGAAGAATACAAGAAAAAGGAACCCCAGAAACGTCAAAAAAGTCGataatacaaagaaaattaaatgcaaGAAGTGCCCGAATAAGTTCTTTGTATCCGAAGCCGATAGCCACGTGTGCCCGCCAATAGATCCCGCGACTTACTGCGAAATCTGCGATAGAAGTTACTGCAATAAGTACCAACTCAAACGCCACATGCAGACGCATGCACCAGTAAAGAAGAATAAAGACCACATTTGTCAACATTGTGATGAACCGTTTCCCACCCAAAATCTATTAACGCAGCACCTGAAAACTCACAATAACAAAAAGCAGTTTGAATGCAGTTTTTGTGGCAAGAAATTCGTAAGGAAAGGCTATTGGGAACGCCACGAGAACACACACAGAGGAGTAAAAGACTACGAGTGTCAAATATGCGATAAAAAATTCAGTTATCGTAATGCTTATACTCGACACAATTGCCAGAAAGCTACGTTGAAGAAGTACCGCTGTCCTTTCTGTCCTAAAGTTTTTACAGCCAGAGAAAACTTCGTGAATCACTATAATCTGCACACTGGTAAAGATCCCTTCAAATGTGTGGAATGCAGCAATATTTTTGTGTCAAACGAACACCTTTTGCTGCATGCTTGTATTGAGCAAAATAAGATCGGGAACATTATTGATGTTGATTGGTTGACTTCCAAATCTATCACCACTGTACCTCCAAAAGATGCTTTAAATTCTAAAGAAAGTGTACAAGTTACTTCTACTAAACGTAAGATGCCAATGGAATCTACAGGCAATTCAGATGAACACAGTGCTTCGAAGAAAAGAGGGCTTTACTGCGAAAAATGCAATGAGAAATTCAATgatattactaaatttaataagCACATGGCCGACCACAACAAACCAATGTTTACTTGCGATGTCTGCGAAAGATCGTTCAAGCTGAAAGCTTCCATGGTAAAACACATGAAGACGCATTCAGGAGCAGATTTCATTTGCAAAATTTGCAATAAGAAGTTCTCGACACGCCAAGTGTACAAGATTCATATACTGAAGCATTCCGAACAGAACTTTGCCTGTGAAGTCTGCGAGAAGACTTTTGAAACTCATCCTGCTTTGCAGATCCACTGTAGGTCCCATAGTGGGAATGCGTATAACTGTAATGTATGCACGAAGTCTTTTAATGATCTTCCGAGTCTTCAAAGGCACAAAATCACCCACGCTACTGAAAAGCTGTTCGCTTGTTTGTGCTGTCCGAAGAAAGGAATGACTAAGTCCCAATATCAGTCCCATTTATATACCCACACTGGAGAAACTCCGTACATCTGTGAAATATGCACTGAAGGTTTCCCCACCAAGAGGAAAATGAAGACACACATGGAATCTTGTAAAGGTGATTAA
- Protein Sequence
- MSVLIDIVPDIEPIFSREGIKFTYKRQTKAKSRKVEGTVEYEEQLARLQDEMELRAGICGRAKLDFENDDEDNAFAMDIDDAIKPETYPKSNPIDCIIDEKVLNLIDEEWMCFTGAMFYSMDEIEHWRRLRDNSYDYKKFFNNNNIDNDNVENKDHEKANENTCKDPETSNTVKFEGSTQNNDESYSEMVKREFSELFEENNNEIAPINAADQLTKPEQEPQEYGRRNHVRTVPKPTCNDIFENINPGPQMNPLKEEQIDDTKHKEPLKVSNEENYKYGIYDDTINIDSKDCREVIEVETKDYKESSQSKDVIDENNIHNQLKSEEKHRKHRKKKHHKKIKIKNGHVTLDKDGNEPPQELDKDKEKRKESKRNKILAPIITDAHTKEETNNEKATDKIVDIRIKAEEGKIDLKESVSGASTVSKSKKKDKKHRHRKDKHRNKEKSDTKIVNNSITTLVEKVKTEETVKPERKSHKHDKKDRERSKSHNPKELERHSLVEDIRKDLKKSRNDETKLKDHNQNNTTPDVNIKTSEEHVKKEHSEGKHSTKERKHKHRHKKSRDHKQRSSHESDKHKTDLTQDKKIKDDNHSKVKNEGPENVKASTSNSQPNMDLVLKNENVIENHRQEDIGGGGNEKRLNIIEDDVEAAIERLFIDPTAILNEFITEEICSCVKEYWESYSNANIATEIKQESPVKKVEKPDDIQASDDDVIEEELRKLINKQLQNFAVDVRIGNEDLSIFNANTPKTNQANGKIKDEFSSNDTPDACQTSNQQQPDKSPKKERDVLPVPKTETDVKQIQEGSSDAKKDPEEISQSDSKKKKHKHSKSKHKSKKDKERSNSKDKSESKEHNKHSDLKHRHHKKKNRDKHSESKSKDHSKQEESTIKTDLKPKSEPIKELQAERENSKLKDQDKIPKIKESSHKHKSIFSDEQKPNSDYKNPKTEQNLQQLNSEAKNNIEMKPPSQMELQINNRQEVCKPNQEIKPPNDKASDYSKDSKRKDDHHKSKHKSNKEEKTTTKPQLKIIETLNLSKDVMRSHYETKEQTTFTETNLKNKEIQTPQLPAKIQPTNNQSPKSKPLSPIKVRINYKSLNTENKEKSQGELNSNANNQGILKSTLISPSESKENSGLEPQPQNGTKSEPKQNKPIILKIKSGNLHMKSKDQEEKTKSKAIPSAIDKKENSKIKLKETDKEADKKSLSDNKEKRDKPQPNSESRTESVKSIKKTDPVDSKADQSLSINEDEQKSNTKQEDDKKSTPKSRKRKHKSENKTQSKNDTVSIIKEGYEHNTYLSSRIVSEDGHTKIKIKRRLNVEEAPKNPAPAEKSNSNQKIHTSSVIDDPKTNDELLYEPKPKRAKTNKESDIKVPKNDHILQLAPLDSEEKNTRKRNPRNVKKVDNTKKIKCKKCPNKFFVSEADSHVCPPIDPATYCEICDRSYCNKYQLKRHMQTHAPVKKNKDHICQHCDEPFPTQNLLTQHLKTHNNKKQFECSFCGKKFVRKGYWERHENTHRGVKDYECQICDKKFSYRNAYTRHNCQKATLKKYRCPFCPKVFTARENFVNHYNLHTGKDPFKCVECSNIFVSNEHLLLHACIEQNKIGNIIDVDWLTSKSITTVPPKDALNSKESVQVTSTKRKMPMESTGNSDEHSASKKRGLYCEKCNEKFNDITKFNKHMADHNKPMFTCDVCERSFKLKASMVKHMKTHSGADFICKICNKKFSTRQVYKIHILKHSEQNFACEVCEKTFETHPALQIHCRSHSGNAYNCNVCTKSFNDLPSLQRHKITHATEKLFACLCCPKKGMTKSQYQSHLYTHTGETPYICEICTEGFPTKRKMKTHMESCKGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -