Basic Information

Insect: Cephonodes hylas
Gene Symbol: ham
Assembly: GCA_030295005.1
Location: AP025376.1:7709173-7718510[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.7 51 5.0 0.1 2 23 40 62 40 62 0.92

2 9 0.0014 0.1 13.6 0.6 1 23 69 92 69 92 0.93

3 9 1.5e-08 1.1e-06 29.2 0.1 1 23 98 121 98 121 0.96

4 9 1.3e-06 9.5e-05 23.1 1.7 1 23 127 149 127 149 0.95

5 9 4.7e-05 0.0034 18.2 6.1 1 23 155 177 155 177 0.99

6 9 0.00018 0.013 16.4 0.4 2 21 185 204 184 205 0.94

7 9 6.2e-08 4.5e-06 27.2 0.7 3 23 604 624 602 624 0.98

8 9 4e-07 2.9e-05 24.7 1.7 1 23 630 653 630 653 0.97

9 9 4.4e-06 0.00032 21.4 3.3 1 23 659 681 659 681 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.7	51	5.0	0.1	2	23	40	62	40	62	0.92
2	9	0.0014	0.1	13.6	0.6	1	23	69	92	69	92	0.93
3	9	1.5e-08	1.1e-06	29.2	0.1	1	23	98	121	98	121	0.96
4	9	1.3e-06	9.5e-05	23.1	1.7	1	23	127	149	127	149	0.95
5	9	4.7e-05	0.0034	18.2	6.1	1	23	155	177	155	177	0.99
6	9	0.00018	0.013	16.4	0.4	2	21	185	204	184	205	0.94
7	9	6.2e-08	4.5e-06	27.2	0.7	3	23	604	624	602	624	0.98
8	9	4e-07	2.9e-05	24.7	1.7	1	23	630	653	630	653	0.97
9	9	4.4e-06	0.00032	21.4	3.3	1	23	659	681	659	681	0.98

Sequence Information

Coding Sequence: ATGCAAATGTGGGGTCAAGTGAGCATATTAACCCTCGCCGCAGAACGTCAAAGCTCGAGTGAAAAGTTTAGTTCTCAGCCGTCGCTTGAGGACGAAGAACGCGAGGATACAGAGCCTAGGTGTTCCTTTTGCGACGCTCCGTTTCCAAACATTGACGTGCTAGACCAGCACCTGATCCAGCGACACGCACAGCCGGCGGCGGCCTTCCACTGTGAGCTTTGCAACCGCGCGTACAGCTCAAGGCCGTTGTTGCTGCGCCACCGGGCCCTAGCGCACACTGATATCAGGAAATATCCCTGCGAGAACTGCCCCAAGGTATTTACCGATCCTTCCAACCTCCAGCGCCACATCCGCGCGGCGCACGTGGGCGCGCGCTCGCACGCCTGCCCCGAGTGCGGCAAGACCTTCGCCACCTCCTCCGGCCTCAAGCAGCACACGCACATCCACTCCAGCGTCAAGCCCTTCCAGTGCAAGGTCTGCTTCAAGGCCTACACGCAATTCTCCAATCTGTGTCGCCACAAACGGATGCACGTCGCTTGTAGAGCATTGGTGGAGTGTGTAAAATGTGGACAGTCGTTTACGTCTTACGCTTCACTCACTAAGCACAAAAGATTCTGCGACACCGCTACAGCCGCTTCAGTGAATCTTAGAGGTCAGCTCCCGCAAGGTCTTCCACAAATACCACCCTTACGGAACGTCGGCATGAATAATCCCAACAACGCCAACCCGTTCCCAATGTACAGCGGACCGGCACTGCCTCTGCCGTACAATGCATTTGCTCACTATCCAGCGCTGTTTTCCGCTGCTGCTGCTAGTTGCCCACCAGAGTTCTTGAATCCTTTGCTTTTCAACGTGCAAGGAGCGAGACTTGCTATGGAACATGACATAGCAATGTCTAACGCAAACTTAGCATCAAAGCAACAAGAAGGTCGTTTATCAGTTAAAAGCATGGACAGTTCAAATTCTGTAGACGAAATCAAAAAGCCCAAGGATATTGAATTTGATATTACAAAGAAGGATAGCGACAGTGGCGATAGAGTCACACCAAACAAGTCTCAGAGCTTGTACGTTAAGCAATCCCCATCGTCAGCTGATGAAACTTCCTCCCATCATCAATCCCCGGTGCTGCCTATGCAAACGCCACCAGTTCCTTTCAACTTTGCAAGAGATGAATTCAAGCGAAAATCACCATTTAATCTGtctttaaaacttaataataatgatgttcaaatggataaaaaatccttttcttCGTTGCCTAAAGATTTATCAAAGAATGGAAATGAAGACGAGAAAAATTCTGAATTTTCCGAAAATGAAGAAGATACAAAGAAAGAAGAATCCGAGCAACCTTTAGATTTATCCGTGTCAAGGAAGCAACATGATAAAGATTCTGAAGTCGATAATGATGATCGTTCTTTTCGTAACTCCATCAAGTCATATTCGCCACCTGAAAGTCCAACAGAGCGAAGCAAGACTCCTGAAAACGACACCACCGATGTAGACGTGGAAGGTGTAGAGCCAAAGAGGGAAGATTCACCAGCTCAGATGGTGTCGCCGCCGCTCGCGTTCCCCATGCCCGTCCACCCGCAGCACAACAACATCATTGAGGCCATGTATCGGCCCCGTTTCCCACCGTTTCATTCTTCAGAATCGATTTTGAACTCTACGCACTCTCCATACGTTCCAAGTCCGTTCAATTTTTTATCCCCTCTTCTCGGCACTGACGGTCCCGAGAGGCAACCGAGCGCTTATGCCAAGTTTCGGGAGCTGAGTGCCGCGTCCGGGAAACTGCGCGACCGTTACGGCTGCAAATTTTGCGGGAAAGTGTTCCCGCGCAGCGCTAACCTGACGCGCCACCTGCGTACGCACACCGGAGAACAGCCTTACAAATGTAAGTACTGCGAGCGGTCTTTCTCCATATCGTCAAATCTGCAGCGGCACGTGAGGAACATACACAACAAGGAGCGGCCATTCCGATGTCCGTTGTGTGACAGGTGCTTCGGCCAGCAAACCAACTTGGATCGTCACCTGAAGAAGCACGAGGCTGAGGGGGGGGACTCTCCCAGCTCTGCGGACACGGAGCGTGAGGACGCGTACTTCGACGACATCCGCTCGTTCATGGGCAAGGTGACGTGTTCCCCGGGCGCGCGCTCCCCCCCCGCCGCCTCGCCGCACGGCGCGCACCCCCCGCTGCCCCCCCtgcccgcgcaccccgcgcaccccgcgcacgcGCCACACTCGCAGCACGCGGCCCACGCGCCGCACCCGCCGCACCCGCGCCCCTCGCTCGCCATCAGCACATAG
Protein Sequence: MQMWGQVSILTLAAERQSSSEKFSSQPSLEDEEREDTEPRCSFCDAPFPNIDVLDQHLIQRHAQPAAAFHCELCNRAYSSRPLLLRHRALAHTDIRKYPCENCPKVFTDPSNLQRHIRAAHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCKVCFKAYTQFSNLCRHKRMHVACRALVECVKCGQSFTSYASLTKHKRFCDTATAASVNLRGQLPQGLPQIPPLRNVGMNNPNNANPFPMYSGPALPLPYNAFAHYPALFSAAAASCPPEFLNPLLFNVQGARLAMEHDIAMSNANLASKQQEGRLSVKSMDSSNSVDEIKKPKDIEFDITKKDSDSGDRVTPNKSQSLYVKQSPSSADETSSHHQSPVLPMQTPPVPFNFARDEFKRKSPFNLSLKLNNNDVQMDKKSFSSLPKDLSKNGNEDEKNSEFSENEEDTKKEESEQPLDLSVSRKQHDKDSEVDNDDRSFRNSIKSYSPPESPTERSKTPENDTTDVDVEGVEPKREDSPAQMVSPPLAFPMPVHPQHNNIIEAMYRPRFPPFHSSESILNSTHSPYVPSPFNFLSPLLGTDGPERQPSAYAKFRELSAASGKLRDRYGCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFRCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSSADTEREDAYFDDIRSFMGKVTCSPGARSPPAASPHGAHPPLPPLPAHPAHPAHAPHSQHAAHAPHPPHPRPSLAIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00390618;
90% Identity: iTF_00858791;
80% Identity: -