Chyl004409.1
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- -
- Assembly
- GCA_030295005.1
- Location
- AP025363.1:12946515-12955367[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.00033 0.024 15.5 3.2 1 23 193 215 193 215 0.99 2 29 0.0097 0.7 10.9 0.8 1 23 304 326 304 326 0.98 3 29 0.00032 0.023 15.6 0.6 2 21 352 371 351 372 0.94 4 29 5.6e-05 0.004 17.9 0.2 2 23 404 426 403 426 0.96 5 29 0.013 0.9 10.5 0.5 2 23 514 535 513 535 0.94 6 29 0.076 5.5 8.1 2.2 3 20 563 580 562 582 0.91 7 29 0.00019 0.014 16.3 3.1 2 23 628 650 628 650 0.97 8 29 0.026 1.9 9.6 0.2 2 20 689 707 688 709 0.91 9 29 0.00076 0.055 14.4 2.6 2 23 743 765 743 765 0.97 10 29 0.0001 0.0072 17.2 0.5 1 23 815 838 815 838 0.97 11 29 0.19 14 6.8 0.3 1 20 898 917 898 920 0.91 12 29 0.00051 0.037 14.9 2.9 2 23 932 953 931 953 0.97 13 29 2.4 1.7e+02 3.4 0.5 2 23 965 986 964 986 0.92 14 29 0.0061 0.44 11.5 0.6 1 23 996 1018 996 1018 0.98 15 29 0.0012 0.086 13.8 2.2 1 23 1047 1069 1047 1069 0.97 16 29 0.00043 0.031 15.2 2.3 1 23 1080 1102 1080 1102 0.98 17 29 0.00084 0.06 14.2 4.3 1 23 1110 1132 1110 1132 0.99 18 29 0.001 0.072 14.0 0.2 2 23 1152 1174 1151 1174 0.97 19 29 0.2 14 6.8 3.0 1 23 1221 1243 1221 1243 0.96 20 29 0.0019 0.14 13.1 2.8 2 23 1254 1276 1253 1277 0.94 21 29 0.0018 0.13 13.2 0.3 2 23 1299 1320 1298 1320 0.95 22 29 0.58 41 5.3 0.6 2 20 1324 1342 1323 1344 0.92 23 29 0.0027 0.19 12.6 0.2 2 23 1401 1422 1400 1422 0.95 24 29 0.28 20 6.3 2.2 3 23 1430 1450 1428 1450 0.93 25 29 0.015 1.1 10.3 1.0 2 23 1461 1483 1460 1483 0.95 26 29 0.9 64 4.7 4.3 2 23 1500 1518 1500 1518 0.90 27 29 1.5 1.1e+02 4.0 1.0 2 20 1522 1540 1522 1542 0.90 28 29 0.013 0.92 10.5 0.7 2 23 1591 1612 1590 1612 0.95 29 29 0.0019 0.14 13.1 0.5 2 23 1623 1645 1622 1645 0.96
Sequence Information
- Coding Sequence
- ATGGCCCTTGAACTCGGAAAATGCAGACTGTGCCTCAAATTGGGAGACTTTTATTCCATATTCACGGTGGACAATGGAGTCCAACTGGCGGAGATGGTTATGGAATGTTCGCGGGTGAAAatATACGAAGGTGATGGATTACCAGATAAAGTATGTTCAGAATGCATACAAAAGCTCAGCAGcgcatacatttttaaacagcAATGCGAGAGGGCTGACCAGGACTTGCGACGCAACTATGTACCGCCACCAgGATTCGGGCTATCGCCTAACCGACAGAGCAGCGACTCAGCATTCTCCACCCACACAGATTATTCCAACTTGAACAAGTCTACCGAGGGGAAGGTGACCCCGGCTAGCTCTGCCAGGAAGCGGCGAACCGAAAGCGACAACATTTCCATCACTAGTCGTCATGACTACCGTACGGACGCTAAACACGCTGATGTCAAGGCGCAAAACAAAAAACCTAAATACCTGAACAATTCTATGGACACTGACGACGATGACGACAACAATGACAGTTTGACAGTTGAGAGTGCAGGCGCGGAATCAAACGACGCATCCCCGAAAAAAGAGTTCAAATGTACCAAATGCCctaaatcatttaaatctatATGTGCCGTGAATTCTCACCAACGAATCCATAGGAACGATAGATCATTTGACACTATTGCTACACCGACCAGTACTTCGGGGAGACGTAGCATCGAGAGCGACAATGCCTCCTCAAGCAGCAGACAAGAGTTTCCCGGTAGCACCAAACGCGTCAATGAACTGCGGAGATTGGGCAATACGTCGAAGCGGCTCATGAATTCATCACTGGATACAGACGATGATGACAATGGTGATTCAAGTTTTAAAAGTGAAGCTGGTGCCACTGACTCTGACGAATCGATAATCAAATCTGTATTCAAATGCGAGCAGTGTCCCAACGAGTATGCTTCACTGAAAAGCTTAACCATGCACAAGAGGTTGCATATACGGCAAATGAGGGAGAAAGAATTGGAAGACTCAAAAGCGGCCGTTGTCGAAGCACCAGACGAAGATGACCTGACCTGCAAGAAATGCGGGAAATCTTACAAATTGAAGATAATGCTGAATCGTCACCAGCAGATATGCAAGGAAAAACCTAAGACAGAGCAGGTGTCGCCGAAGAAGGAGCTTCTCGTGTGCCTGGAGCCGGTGGACAGTAAACACAAAGTGAAGGTGGAGTGTGAGATATGCACGGCCAAGTTCAAGACTGTGGACAATTTGAACAAGCACCTGAGGGTGGTTCATGCTGCTGCGCCGAACAGAATCTCAGCGCGGCTCGTGGGGAACGTTTCCGTGCCTTGTATCTACTGCCAAGAGTCGTTCGACGACTACTACGTGCACAGCGCCCATTTCAACACGTGTCCGAAGCGGGACGAGCGTAACAGCTTCAAGTGCCCTCTCTGCCTGGTGATATCGTTCAAGAAGATGGCGTACTTCGGCCACATAAAGAACTCTCACTTCGAGCCGGAGACTCGGGAGCAGTCGGACCCTAAGGAGGACGAGCTGAAGTGTCGGTTCTGCAACAAGCGACTCGCCAACCAACAGCAGCTGATTACGCACTTGGCAGCTCACGTTTCCAATATTGATGAAAACGCTATAAATGATGACAGAATGTCCATCGCAGATACTCCTTTGAATTCTAACGTCGCGCACTGCAAATACTGCAAGAAGGAGTTTAAATACAAACGTCCTCTGCTTACCCACGAGAGCACTTGCCCAGCCAACCCGAAAGGAAAGATAGAGGTGAAGATTGAACCGGAGAAGAACGCAGAAGGTGATGGTGAAGGTGAAGCTGATGAGAGTGATCACTACGTAGAAGAATCCAGCCAGGATGATAATCTGGAGAACGAGTGTGATGTGTGTGATAAGCGATTCTCATATAGAGGCCAGTTGTTGCATCATAAGAAGACGAAACATGCAGGAGTGAAGAGTGGGGCTGCTTCAGTGGATGTGTCTGTTGCTGAAGATGTGGTCAATGAGGATACTAGGACGTCTCTAGTTAACACTTCGACACAATCAACGGGCTCATTAAGCTGTGCTTACTGCCAGAAAGACTTCATATACAAGCGCTCGCTCGCCAACCACGAGAGCACATGCCCGAAAAAAGAAGAAGTGGAGAACGAGAAAGAGAAGCAGAAGACAGAAGATCAGTCGAACGAAGAAGAATCCAGTCAAGACGAGAACTATGACAATACTTGTGACGTGTGCGAGAAACAGTTCTCATACAAAGCCTTGTTAGTCCACCACAAGAGGACTAAACATAACATGTGTTCGGGCACCAAACGGGCTAGTATTACACTCAAAGATTGTAGTGTGAAATGCATGATCTGTGATGAAGATATGAAGGTGAAAGACATTACTGAGCATAACAAGAAGCATCTAGCAGTGAATATGAAGCCGAGGAATATATATACTTGTGGTGTTTGCGGGGAGTTCTTCAAGAACTGTGCGGCTCTCGCTACTCATATTAAATATGTGCACAGATTGAAGAAAGAAACtccaaaagcaaaaaaataccAAAGCTTGGATCCCTCAGCATTCTGTGAGGTGATAGTGACTAAGACGGAGGCTCAAGACTGGCCGCAAGAGGGCGCGTTCGGAAACTCACCCGATGGCGTGGTCAAGCTGGAGACCCAAGCCCAGGCGGTGGGCGGGGGCTTCGAGTGTCCCACTTGTGGGAAGGTCATGCCTACAGCACTGTCCTTGAAAGGTCATTTAGCCTGCCACAAGAAGTATGGTGCTATCGTCGGAAGGAAACTTGAGTGCTTCGTGTGTAAAGAAACGTTCAAGTTCCAAGTGCACTACAAGATGCACATGCGCGTCCACTACAACGACCCCAACCTGGACCCCAAGCACCTCACCTGCACCATCTGCAACCGCAAGAACAAGAACCtgcgcgccgcccgcgctcaCATGGCCTTCCACCAACAAACCCGCTTCCAAGTCAAGGACTACCAGTGTTCGCTGTGCAAACGAATCTTCCAGAACAGAAAAGTGTACTTAGCCCACATGGCGATTCACCAGAAACGAGGAGACACCGCCAAAAACGTCGGCGTTGGATACGAAAGCATCAGCAGGGCGGATAAGAGCATCCTCGACGGAACATACACCTGTGAACTGTGCGGGAAAGTGTGTGATTCTGAAGTGTCTCTCAAACATCATACTAGTTGGCATAATTCAAAGAGTTCGTTGTACGGAGCCCGACACGAATGCGTCATATGCCAGCTCCAGTTCACAAACAAACGAACGCTGACTCTCCACGTCCGTACACACTATGAAAATGACAACGGGCCCTTCAAATGCCACCTGTGCAGTAAAGGCTTCACCGAGGAAGAGTACTATCGAAGACACCTAAAGTCGCACAACTTCGATCACAGCGCTCACAAGAAGAGGATCGAGAGACTGCGCAGGGATCAAGTCAAGTGTCCCATATGCACTCGGTACTATCCAGACCTGGTGAAACTCATTCGACATATTAAGAGAACGCATCCGGAGAGCAAAATGATAAAGGCTGATCCCGACGCGCCCCCCCAACGGTACTACTCTTGCCAGTTGTGTGCTAAAGTGTTCTTGGACGAACGCAGACTGCAGTTCCACAAAGAAGCTCATCTAAGAAAACCAGTGTTCTATAAATGTAAGTTCTGTGGGAAGAAAACGATTTCGCTGAAGAGCCACAATGTTCACATTAAAGCGCACTTGTGCTCCAAGCATTTTGACGATCCGCTTAAGTGTCCGGAGTGTGATGAAACCTTCATCAAGGGGTATGATCTTCACCACCACCTGCGGGACGTTCACCACATCAATGAGACGTGGATCGCCGAGAGAACGGCGGCGGACATGAACGGACCGCTGCAAGACCTGCAGTGCTCCGTGTGCCTGAAAGTGTTGGCAACCAAAGGAAATTTCCAGAGGCACATCGACTATCATAATTCGCTGCGGTGCAACTACTGCTTCGAATACTTCACCTCGCTCAGATTCCTCGAGGGCCACTTGTCCTTCGTGTGCGAGAAGAAGAAATTATTAGGTGACACGGAAGTATACCCGAAGCGTGTGAAGTGCCATGTTTGTTACAAAGCTTTCCATCTGCAAGTGAAATTGGACTGCCATCTTATGACGCAACATGGGATAGCTATCACTAAAGAGGCGTCTGCGGGCAAGCAAGAGATAGTTTGTgattattgcttcaaagtattTGAGAATGAGTACGCATTGAGTACACACAAAATTTACCACCGGACAATCGGGTACTACGGCTGTAGATACTGCTCTAAAAAGTTCAACACGCTAACGGTGTACAGAAAACATAAAACCGCACACTTTAGTTTACTAAATGCAGATAATCCTACAAAATGCGACCATTGTGATGAAAGATTTGTGGCGTTTAGAGACATGATTAACCACATGAAGGAAGTGCATGGGGACGACAGTGAATGGTACACGCTACCCAAAAATTCAATAGAAGAAACTTgcaatatttgtaacaaaaccTTCTTCAATTTGCATAAACATTTGTCGTACCATGAAGAGAACAGATGCAAGAAATGCGGAGAATACTTCTTCTCAGTGGTCGATTTCGATAACCATCTGTGCGCTATAGAGAGTGACGACGAACAAGACGCGAGTATTAACGGTGTAACCGGTGCAAAATACGAAGAATGTAACTTCTGCTTCAAGCCTATCACTACCACCAATTCCCAACTGAAGCACGACAAAATACACCGCAGCTCCGGGTCGATATCCTGCCGATTCTGCCCCAAGAAATTTAAAACGATCGACGCTTTCAATATCCACGCTTTCACTCATCGAAGCAGGAAATATAACAACCGACCGATAAGGTGTCGTAAGTGCGGCGAAAAATTCGTGAAGTACGGACCTTTTATAAAACACATGAGGAATGTGCACAAGCTAGCGTTGAAGCTACATTACAGAGCAACTGTGATGCCGGAGAGATGTGTGGTGTGCGATGACGAGTTTCCGAACTTACACAATCATTATCGAGCTCACCTTCTGAACCAGTGTCAACAGTGCCACAAGTACTTCACATCATTCAAAATATTCACTAAGCATGAATGTGATAAAGAGGACAGTGATCCGTCGAAAGTGTTCACTTGTGATGAAGATTTGGTAGCCCTTATAAATGAATATGAGCCGAAAGACCAAAAAAGTGATGAGAAACTATATGGAGACTCAGATGACGAAGATGCAGGGTATAATGAAGAGTTACCGGATAATGATACAGGATACCTTGAGCCTGTTCATGAAGATGACAAAAAATATGAGACATTCCAAGCTCCAATCATATCTGATGTTTTATCTCTGTACCAGACTGAGGAAGTGACTAGCCAGGACGAAGAAAGCCAACCAGCCAACACCAATGTGTTTGTTATTAGTAGTGATGAAGAGTCTAATGATGTAAGCTCACACACCAATCCCATTCTTCTAGTAGACTGA
- Protein Sequence
- MALELGKCRLCLKLGDFYSIFTVDNGVQLAEMVMECSRVKIYEGDGLPDKVCSECIQKLSSAYIFKQQCERADQDLRRNYVPPPGFGLSPNRQSSDSAFSTHTDYSNLNKSTEGKVTPASSARKRRTESDNISITSRHDYRTDAKHADVKAQNKKPKYLNNSMDTDDDDDNNDSLTVESAGAESNDASPKKEFKCTKCPKSFKSICAVNSHQRIHRNDRSFDTIATPTSTSGRRSIESDNASSSSRQEFPGSTKRVNELRRLGNTSKRLMNSSLDTDDDDNGDSSFKSEAGATDSDESIIKSVFKCEQCPNEYASLKSLTMHKRLHIRQMREKELEDSKAAVVEAPDEDDLTCKKCGKSYKLKIMLNRHQQICKEKPKTEQVSPKKELLVCLEPVDSKHKVKVECEICTAKFKTVDNLNKHLRVVHAAAPNRISARLVGNVSVPCIYCQESFDDYYVHSAHFNTCPKRDERNSFKCPLCLVISFKKMAYFGHIKNSHFEPETREQSDPKEDELKCRFCNKRLANQQQLITHLAAHVSNIDENAINDDRMSIADTPLNSNVAHCKYCKKEFKYKRPLLTHESTCPANPKGKIEVKIEPEKNAEGDGEGEADESDHYVEESSQDDNLENECDVCDKRFSYRGQLLHHKKTKHAGVKSGAASVDVSVAEDVVNEDTRTSLVNTSTQSTGSLSCAYCQKDFIYKRSLANHESTCPKKEEVENEKEKQKTEDQSNEEESSQDENYDNTCDVCEKQFSYKALLVHHKRTKHNMCSGTKRASITLKDCSVKCMICDEDMKVKDITEHNKKHLAVNMKPRNIYTCGVCGEFFKNCAALATHIKYVHRLKKETPKAKKYQSLDPSAFCEVIVTKTEAQDWPQEGAFGNSPDGVVKLETQAQAVGGGFECPTCGKVMPTALSLKGHLACHKKYGAIVGRKLECFVCKETFKFQVHYKMHMRVHYNDPNLDPKHLTCTICNRKNKNLRAARAHMAFHQQTRFQVKDYQCSLCKRIFQNRKVYLAHMAIHQKRGDTAKNVGVGYESISRADKSILDGTYTCELCGKVCDSEVSLKHHTSWHNSKSSLYGARHECVICQLQFTNKRTLTLHVRTHYENDNGPFKCHLCSKGFTEEEYYRRHLKSHNFDHSAHKKRIERLRRDQVKCPICTRYYPDLVKLIRHIKRTHPESKMIKADPDAPPQRYYSCQLCAKVFLDERRLQFHKEAHLRKPVFYKCKFCGKKTISLKSHNVHIKAHLCSKHFDDPLKCPECDETFIKGYDLHHHLRDVHHINETWIAERTAADMNGPLQDLQCSVCLKVLATKGNFQRHIDYHNSLRCNYCFEYFTSLRFLEGHLSFVCEKKKLLGDTEVYPKRVKCHVCYKAFHLQVKLDCHLMTQHGIAITKEASAGKQEIVCDYCFKVFENEYALSTHKIYHRTIGYYGCRYCSKKFNTLTVYRKHKTAHFSLLNADNPTKCDHCDERFVAFRDMINHMKEVHGDDSEWYTLPKNSIEETCNICNKTFFNLHKHLSYHEENRCKKCGEYFFSVVDFDNHLCAIESDDEQDASINGVTGAKYEECNFCFKPITTTNSQLKHDKIHRSSGSISCRFCPKKFKTIDAFNIHAFTHRSRKYNNRPIRCRKCGEKFVKYGPFIKHMRNVHKLALKLHYRATVMPERCVVCDDEFPNLHNHYRAHLLNQCQQCHKYFTSFKIFTKHECDKEDSDPSKVFTCDEDLVALINEYEPKDQKSDEKLYGDSDDEDAGYNEELPDNDTGYLEPVHEDDKKYETFQAPIISDVLSLYQTEEVTSQDEESQPANTNVFVISSDEESNDVSSHTNPILLVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00787876;
- 90% Identity
- -
- 80% Identity
- -