Chyl005878.2
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- -
- Assembly
- GCA_030295005.1
- Location
- AP025365.1:4880454-4889223[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0045 0.33 11.9 1.0 3 23 484 505 483 505 0.96 2 23 0.2 14 6.8 0.3 1 22 887 908 887 908 0.95 3 23 1.1 80 4.4 0.3 1 23 950 973 950 973 0.91 4 23 0.0023 0.16 12.9 1.8 3 21 984 1002 984 1003 0.96 5 23 2.9 2.1e+02 3.1 0.1 2 23 1011 1033 1010 1033 0.89 6 23 0.025 1.8 9.6 0.2 3 23 1054 1075 1052 1075 0.97 7 23 0.0011 0.082 13.8 1.9 1 23 1081 1104 1081 1104 0.96 8 23 0.12 8.5 7.5 0.0 1 23 1130 1153 1130 1153 0.90 9 23 0.0051 0.37 11.8 3.5 1 23 1158 1180 1158 1180 0.97 10 23 0.016 1.2 10.2 0.2 1 23 1186 1209 1186 1209 0.95 11 23 0.00095 0.068 14.1 1.2 1 23 1222 1244 1222 1244 0.98 12 23 0.005 0.36 11.8 4.3 1 23 1293 1316 1293 1316 0.96 13 23 0.0048 0.35 11.8 2.0 1 23 1376 1399 1376 1399 0.97 14 23 0.0019 0.14 13.1 1.5 2 23 1425 1447 1424 1447 0.95 15 23 0.049 3.5 8.7 0.4 2 23 1453 1475 1452 1475 0.95 16 23 0.0069 0.5 11.4 0.5 1 21 1520 1540 1520 1541 0.95 17 23 0.0012 0.083 13.8 0.6 1 23 1551 1573 1551 1573 0.93 18 23 0.0001 0.0075 17.1 0.3 2 23 1661 1683 1661 1683 0.93 19 23 3.1e-07 2.2e-05 25.0 1.4 3 23 1690 1710 1689 1710 0.98 20 23 0.03 2.2 9.4 1.1 1 23 1733 1755 1733 1756 0.95 21 23 0.17 12 7.0 0.0 1 23 1773 1795 1773 1795 0.97 22 23 0.011 0.81 10.7 0.4 1 23 1801 1824 1801 1824 0.95 23 23 8e-05 0.0058 17.4 0.5 1 23 1832 1855 1832 1855 0.96
Sequence Information
- Coding Sequence
- atgagTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCCGATGACTCGGAACCTCCCGTCCTCGCTTCGAAAATTAAGGATTGCGTGTCCATACAGATAACCGAAAATGACGACTTGCCGACAAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATGTATTCAAGAGTGTGTGTGAAAGGACTCAAAACAAACTACAGTCTCTGATTAATAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAGAGTGAACCTTTGTCTGATGAAGCCTATGATGATGGAGTGGTCATTGATGGAGCATACCATGACAATGAGAATACCACCTCAAGTAAAATGCAGCCAGAAGGGCCCCCAATCTTGGCATCGTTGGGGCTCACGCCGAGGAGTGATAAGACAAATGTGGACCCCCGTATGGACTGGCATCGGGTCCATGCAATATTGAACATGGTACAAGACAGCGATATCATTGATTCCCTACAGAACACGGAGGAATGTGATATTCTCCAGTATTCGGACCATGATTCTGAGTCAGAGACAGAACTTCAACCGGACATTGATGACATGTTTCTGGATTTTAAAAGTGGatatctatgtaaaaataacaaaataatatcaaaaagtcCAAAATTATCTTCATCTCTTAACAGTGCTAGAGTGAGACAAGTTGCCAGTCTGAGGAAGCGTAAAGTTGAGACTGTTAGACATTATGCCAGACCAAAAGACGCCTGGCATTTATTTTTCACTGATGATCTGCTTGAACAGATAGTTATTTCAACTAACCATAATATAGTTAAGAATGGTAAGAATTATTCACTTACTACGTCTGCTGGCGAAGTAAAAACTGTTATCGGTATATTATACTTAAACGGCTTAATGAGGCCAACGCATCAGAAATGCAGTGACCTTTGGAATAGCGACTACGGCGCTCCATGTGTACGAAGAGCAATGAAGTACGAACGGTTTAAATTCATTCTGCAGAATATGAGATTCGATAAAGAAGATtctgaaagcataacacagctGGACGTCATGAAGCGCATACGTAAAGTGTTTGAAATATTCGCCATGAACTGCCGAACGACTTTCGACATCCAGAATGTTGCGGTTGTTGATGAGATCATCGTGCCAGTTTACGGGCCTTGCCCATTCCGATACAATATTGATAAGAAACATTTAAAGCGTGGTGTGAAAATGGTGTTGTTGGTTGATCCGTCCAACTTCTATGGCATGGAGAGTGAAAAAGAGGAAGAAGATGAAGACGAGGAAGAGATGAATGAATCAAGCCAATCCTATGCAAAGGTTGCAAGCATGCCTGAAGTATCTATCACTGTTATGCGTCCATCAGGGGAAACGTTGCATGCGCGGCAAGGTATTCAACAACTAGCATCCAAAGATTGTCTCGTTTGCGGACGAAGCTACAGATATTCGCACAACGCTAGGAGACACGAGCTTACCGCTCATAGCTTTGATAGGTACACAAACAAAGTTACAaataagaaatctcatacaatgCGTCTTCAACCTAAATTAAGACCTAACCCGTTCAATCCAAAAGCGAGGTTAATGCCCAATCCCATTAGCCACAAAATGCAATACATACCTAAGAATATACCAGCTAAAGTATTACCTCAGAAGGTCATTACCCCACCGAAACCTATACctataaaaactacaaaatcaCTTCAAAACAATTTGCCATATCCCCTTAGGATAAAAGCACTAAAAGATttacaaataaagaaaaaggaACCGCAGATATTAAAAACTTTGCTCACAACAAAACCGGAAGTTTTGGTGTCAGAAcccgaaattttaaattcagGACCAGAAAGTCCCGAGACTTTGATATCTGAACCGGAAATTGCATCATTCCAAGTAGAAACTATACTGTCTGAACAGGACCCTGAGTCTTACGATCATCACCAGGGTGACGATGAAGCGGATGGTGATATGCACAATAATCAGAACCAAAATTACGACACTGTCGATATGGATTCAGAGAATGAAATAGAAATTGCTAGGCAGCAAGAAAACCATCATGATGGTGACGACCAAAATGATGACAATATGCAGAATGACGATGATAACAACATGGACGCAGGTCACAGTGACAACGATAAAGAACAGAATGATGATACAGGTGACAGTCAAGATATGGTCATTGATGAGACTGCTGAAATTAAAACTGAAGAATTTGACGAAAAAGACGGTGATGAAGATAATGAAGAAAAGGATCACGATGAGCAAGAGTTAAATCATGATataaatgatgatgacgaagatGAGATGCCACCGATTGGTATAACGCCTGTAGTAGAAATAAATGAAGATTTACAAGTTAATAATTCTTACAATAGTGAGCTTCATGAAGAAGATGACGAAGACCTTGATGAGACAGGTGACCCTAATGACACTGTCGACGAAATGAAAGAGCTCGATCCTGACAAATTATATGTAACAAAAACTCAAagagactttattttaaagtatcgCGACGTAATTCAGCAAATCAATACGAAGCGGTGCTTGTGCTGTGATCGAGAACATCCTCGAAGAAAAGCTGTCATACAGCATTTACAGAAAAATGGTCAGAAGGTTCCCAAGCATACGTGCTACAATTGCGTAATAACTTTTGGACACATTGGCGCTTTACTTAGCCACATGAGATCGAATTCATGCACAGATCTCtggaaaattatttacaacGAGAATGGTATTACTGACGATTTGGTTCTTGAGGACGAGCCAAAAGATAACAAAGTTCAGTACAAGGATATTTTTAACGCTAGGTCATATGCATGCAAGCTGTGCCCAGCAAAATTTCAGTTGAAGCAGTTTATAATGAAACATATGTTGGACGTTCATGAAGATGGACAGTCCCGGGTGCCTCTCGGTTGCGTACATTGCCGAGCCAGGTTCAAAGACAAGAGTTTACTCAAAAAACATATACGTAATGGTGAATGCACTGTGTACATATCGTGCGATTTGTGTTCAGAGCAATTTGGAAACATGCAGGATTTCAACGATCATGCCTTAGCAGTCCACGCTGGTAGCTTTGACCAATCAGATAACTCAAATAAATGTGTGGATGGTCGACCAACAGACTGTCCGTTATGCGGCAAAAAGAACAGCAACTACCCATTATTGGTGAAGCACTTGAAAACTATTCACAACGAGGAGAAGCCACATTACTGCCAACATTGTGATGCTAAGTATGAGCAAGCGGCCGATCTAAACAAACACATATACACGGAGCATTCTGATAGATCGTTGGGCATGCAGAATAATGAGCCCGACATGTCTCTCGTGAAAGAAGAGGCTGAGGAATATCATTATTCTTGCACAGAGTGCAACGCCATATTCGAAACTGTGGACGCTTGGACCGACCATCAAGTTGCCGAGCACAACCAGGTGGCGCACCACTGCGACCAGTGCGACAAGAAGTTCCTCAGGCCGTCAGAACTAGCCGAACACAAAAACACACATTTGCGTGTCAAATTCTATCCGTGCAGCGTTTGCTCTAACTCTTACAGTACTCCGCAGAAATTATCAGAGCACGTGCAACAAGCGCATCCCGGTGTGCGAGCGTTGTCTAACACGGAGTCTGAATTTTATTGCGAAATTTGCATCAGATCGTTCAAGAGCCGGCAGGCGTATTCTAACCATATGCGTATTCACGCCAAAGTACCCACCACTAATAGAAAACCGGGTGAACCCAAAGGCTTTGCGCCGCAGATCATTGGAAAGCCCATCAAACAGTTTTCTATGATGCAACCAGGGTTCGTATCTTTCAAGCCCAGCTACAATGTTCCTAACGCTCCTTATTGCTGTGACCTGTGTGGCAAAGGATTCATGCACAAAAAGAATATATGGAAGCATAAGAAAGTTTTGCATGCCGATATTTTGAAAGATAGGAATGACAGTGAAGAAAATACTATGCAGGCCTCAACCGAAGAGGAAGAATTTAATGCCGAAGAGAATGGCACTGGGTTATCGACGCCGCAATTTAATAGCTTCAATTTTACGAATTTCACGAGTAATTCGCAACAAATGAACCAAGAAGCGAATGCTTACTCGTGTGAACTGTGCTTCCAACGTTTTCCGTTGCGTAGCAGTTTGTGGAAACATAAACGGAATAAGCACGGTATCATTGATCCTAACGCGGACGGGTCAGAAAGTCAGTCTCACATGTCGGGCGGCGACGGTAGCAGTAGGTCGAGTTGCACAATATGCAAAATAACATTCGCAGATAAGAAATCCTATTACAGACACAGGAAGAATGTCCACAAGTCATCCGTGCAAATGTGCAAGCTTTGCGGAAAACCGCTCACCTCTACGCTCGAGTTGTATGAACATTTAAAATCTACACACGCACAGGAATTATTAGGGTATAACGCTAACCAAGGCTCGAGTAAATCTCAAGAACCGACGCAGGAAATGGAGCCAGATTACGACAACGACCAGTCCGAGGCCGGCGACCCGAGTGCCGATTACCAGGCGAGATATCCTTGCGACACGTGCGGTAAACATTTCGTAGGACTGCTCGCTTTACAAAACCACCAGTGTATCAATCAAGTTCCATCGCAACCGCAGACGTTCGATTGTGAAATCTGCCACAAGAGTTACACGTCCATCGCCGCTCTGAAGAGCCATCGAGGATGGCACTTGCGCTCGCCCGACGGCAAGGCGGCCGCCAACAATTCCGGCTTGTGGATGCCGCAGCACAAGGTGACAAACAAGATCAGCAAGTACGAGGTCGTCGACCCGTCGCAGTTGGCCCGAGTCCAACATTCGACGCCCGCCTCCATCGCCAAAAGAAGACTACCGCCAGAAGTGGAGGTGACCGTCGTCAACCCGAACAAGAAGCTGCGCTCCGACGACTCGATGGAGATGGAGCAGCACAGCTCGAGCGCGCTCGAAGACCGGTACTGCACCATCTGCGACAAGGAGTTCACGAAGCGCGCCGCGTACCAGCGGCACATGGACGAGGTGCACCAGCCCAACTCCGTGTTCTGTCCCGTGTGCGACAAGAGCTTCACGCGCAAGTCCACGCTGCTCGTGCACATGAAGAAGCACTACGAGGGCGGCGAGGGAGGCTCGGGCGGCTCGGGCGGCTCGGCGGCGGCGCCGGACGACGACGCGTACGCCTGCTCGCTGTGCGGCGCGCAGTGCGACAGCGCCCGCGGGCTGCGCGCGCACCGCGAGCGCCACCACGCCGAGTCGGACTCGGAGTCGGACgggcccgcgccgccgcccggcgAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCCACGCCCCGCGACCTCATCGCGCACCGCACCATGCACGCCACGCCCACCAAGTTCTTCTGCAACATCTGCAAGGTGTACTTCGCGCGCGCCATCGACCTGTCGTCGCACACGCGCGCGCGCCACGCCGACAACGACAAGGTGTACTTCCCGTGCTCCATGTGCGAGCGCTCCTACATGAACAAGAAGAGCTTGCAGCGGCACATCGAGATGGCGCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSIQITENDDLPTNVCRKCMDNVNNWHVFKSVCERTQNKLQSLINKDGSQLEEVKIKSEPLSDEAYDDGVVIDGAYHDNENTTSSKMQPEGPPILASLGLTPRSDKTNVDPRMDWHRVHAILNMVQDSDIIDSLQNTEECDILQYSDHDSESETELQPDIDDMFLDFKSGYLCKNNKIISKSPKLSSSLNSARVRQVASLRKRKVETVRHYARPKDAWHLFFTDDLLEQIVISTNHNIVKNGKNYSLTTSAGEVKTVIGILYLNGLMRPTHQKCSDLWNSDYGAPCVRRAMKYERFKFILQNMRFDKEDSESITQLDVMKRIRKVFEIFAMNCRTTFDIQNVAVVDEIIVPVYGPCPFRYNIDKKHLKRGVKMVLLVDPSNFYGMESEKEEEDEDEEEMNESSQSYAKVASMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKVTNKKSHTMRLQPKLRPNPFNPKARLMPNPISHKMQYIPKNIPAKVLPQKVITPPKPIPIKTTKSLQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILSEQDPESYDHHQGDDEADGDMHNNQNQNYDTVDMDSENEIEIARQQENHHDGDDQNDDNMQNDDDNNMDAGHSDNDKEQNDDTGDSQDMVIDETAEIKTEEFDEKDGDEDNEEKDHDEQELNHDINDDDEDEMPPIGITPVVEINEDLQVNNSYNSELHEEDDEDLDETGDPNDTVDEMKELDPDKLYVTKTQRDFILKYRDVIQQINTKRCLCCDREHPRRKAVIQHLQKNGQKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHMLDVHEDGQSRVPLGCVHCRARFKDKSLLKKHIRNGECTVYISCDLCSEQFGNMQDFNDHALAVHAGSFDQSDNSNKCVDGRPTDCPLCGKKNSNYPLLVKHLKTIHNEEKPHYCQHCDAKYEQAADLNKHIYTEHSDRSLGMQNNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQAHPGVRALSNTESEFYCEICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIIGKPIKQFSMMQPGFVSFKPSYNVPNAPYCCDLCGKGFMHKKNIWKHKKVLHADILKDRNDSEENTMQASTEEEEFNAEENGTGLSTPQFNSFNFTNFTSNSQQMNQEANAYSCELCFQRFPLRSSLWKHKRNKHGIIDPNADGSESQSHMSGGDGSSRSSCTICKITFADKKSYYRHRKNVHKSSVQMCKLCGKPLTSTLELYEHLKSTHAQELLGYNANQGSSKSQEPTQEMEPDYDNDQSEAGDPSADYQARYPCDTCGKHFVGLLALQNHQCINQVPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKISKYEVVDPSQLARVQHSTPASIAKRRLPPEVEVTVVNPNKKLRSDDSMEMEQHSSSALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGGSGGSGGSAAAPDDDAYACSLCGAQCDSARGLRAHRERHHAESDSESDGPAPPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARAIDLSSHTRARHADNDKVYFPCSMCERSYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00787871;
- 90% Identity
- -
- 80% Identity
- -