Chyl000809.1
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- csw_1
- Assembly
- GCA_030295005.1
- Location
- AP025360.1:14406492-14414542[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-07 0.0002 21.5 0.0 3 29 128 154 127 154 0.96
Sequence Information
- Coding Sequence
- ATGGGTGAACCTGAAACTGGATGTATTGATAGTACAAGCAATGATTGCCTTATTTGTGATAAAATCGGATCTAGTTCTGAATTAAGCTCTGAACTAGGAGATATTATAAAAGTCACTAGAGGCATATCATCGTTAAAAGCTGCATCTGCGAAAAGAGGGGATGGACTTTCTCAGTGGTTTCATGGAGTGATGTCTGCGAAGGAGGCAGAGCACCTCATCATGGAGAAGGGCAAGAATGGCTCGTTCCTGGTGCGGGAGTCGCTAGCCCATCCCGGCGAGTACGTCCTATCTGTCCGAGTCAGGGGAAGGGTCAGTCACGTCATGATTAGACGTCAGatGCCTAGACATTACGAAAGTAAAACCACACCGAGATACGAAATTGAAAATCTTCGCCGTGCAATACAAGATGTTAGAAGTAAACAGCTAACTTTGGGCAAAGCAGCGATCAAATATTCACTACCATAA
- Protein Sequence
- MGEPETGCIDSTSNDCLICDKIGSSSELSSELGDIIKVTRGISSLKAASAKRGDGLSQWFHGVMSAKEAEHLIMEKGKNGSFLVRESLAHPGEYVLSVRVRGRVSHVMIRRQMPRHYESKTTPRYEIENLRRAIQDVRSKQLTLGKAAIKYSLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -