Chyl013500.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cephonodes hylas
Gene Symbol
-
Assembly
GCA_030295005.1
Location
AP025374.1:11959007-11961580[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-08 2.1e-05 24.5 0.0 2 45 13 55 12 55 0.96

Sequence Information

Coding Sequence
ATGCCGCCAATAAAAGGACAAATGTTCCGTTATTCCGAAGCTGACATGGAAGCAGCTGTACAAGAATGCAGAAGAGGTTTACCAACAGCAACCGTGGCGAAGAAATTCGGTGTGCCAAGGGTAacactgttaaataaagtaaggGGGAAGACCCCATTAAAACGTAAAATGGGGAGAAAATGTTACATTTCTGAAGACACTGAAAATATGCTCGTTCTATGGGCTAAAGAAATGGTAAAACAGGGATTTCCAATTGGGAAAGAAAACTTACAAGacagtgtaaaaaaaattgtagatgatttaaatattgaaactcCTTTCACGGAAGGTAGACCTGGCAAAAGATGGTACAATAGTTTTTTGAAACGACATCCGGATCTCATTTTAAGGCAGCCTCAAAATTTGACTACCTCCAGAGCTTCAGTTACTACATCACAATTGAAAAATTGGTTTGACGAAGTCTATACACATCTCAATGACACCAATAACAGAGAAATTTTGGATGACCCTCGCAGAATTTTTAACATGGATGAGACTGCATTTTTTCTCAATCCAAAAGGTAGCAAGGTTTTGGCGCCTAAAGGTATTAAATCAGTATACCAACAGATAAATTCTGATGAAAAGGAATGCTTTACGGTACTTTTAGGTGGCAATGCTTCTGGCGACGTTTTGCCACCAATggtcatttttaaatatgaaagaaTTCCCAGAGAATTAAGTTTATCAGTCCCAGCATCTTGGGGTATTGGACGCTCTAATAATGGATGGATGACCATGGAGACTTTTTACGAATATATTTGTAACATCTTCGATAAATGGTTAAATGACAATAACATTCCGCGACCAGTGATATTGTTTATGGATGGACACACGTCACACCTGTCATTTCATGTCAGTAAATTTTGCTCTGATAATAAGATAATCTTGATTGCCCTGTTTCCTAACGCAACACATCTTCTGCAACCCATGGATGTAGCCGTTTTTAGAAGTTTGAAAGGGGCTTGGAAAAATGCGGTGCATTCTTGGCGTTTGGAAAACATAGATTCCCCTGTTTTGAGGAAAGTTCATTTTTGCCCGCTATTGAACAAAGTTTTGAAAGAGACATTAACGCCAGAGATATTTCAAAATGGCTTTCGCAAGTGTGGTCTCTTACCATGGAACCCAGatgaagttatctgtgtatcaGAAGATCCAAAGCTTACGGAGTTACAACTACTGGCAAAAACGAAAGAACTGGAAATCGGAATGAAATTCATGGACAAATATATAGATGCAGACAAGGTTGCAAAATTTAAAGAAGTGAGAGGCAATGACTGGATTGGAGCAAATGCAGAATTTggattatttcaattttacaaaaaagtcgAGAATTTATTGGTGCAGACTAAAAACCAACTGGCAACGCAAGTAATACTTTCAACGGAAATACTTCCCACTTTGAATTCTTCAGTTCCGGAATATAACTGCACAAGTGAAATTACAAATTTTCAGACAGAAGTCCCTCAAGCTCCAGAACCTACTGAAAGTATTTCACTATCACCATCCACTTCTCAAGTCATAAGATTAAATTCTCCATCAGTTATCTACTCCTATTTACCTACAAATGAAGAACCAAAAACTCCCAGCAAAGTAGCTGATCCAGCACAGGCGTCTTGTAAGAATCTCTCTTTGAATCTGGAACTAAACAGCACAACAGAATCTGATATATTAATAACGCCATATGAATCACAAGACATCACTGAGTTAGATACACCTGATCCGCAAATAGTCATAAAAGAAGTTCCAAAAACACCTAACAAAGTACCTGGACTGGAAATTTCTCAAAATATTCCATCTACATCGagacaatataatattacaggTACTTTCCGAAACAAATCAGAAATGGTGATTCCTAGCCCATTCAAAAGAGCTTTGTTTTGGCCGACAcctaaagaaaatatcaaaaagaggaataaagaaaaaattcCCTCTGTTATAACATCTATTGAGTGGCAAACATACTATGAGTCCAAAGAGAGAAAGAAGATTCAAGCagaggaagaaaaaaaaagaaaagccgaagaaagaaagaaaaaaaaagaagagacTGAAAAAACACTTAAACTAAAGGCTGCTAATAAGTTAGTTAAGAAAACCTCGAAGACTGTGaaacgtaaatataaaaaggttGAATGTGACTCAAGCACCGAAGAAGAATGGGAAGAATCCGGAGAGAGTGATGATGACATATCTGATTATAATAAGagtgatgatgaagaaaataaatattttgagtcTGAATTAGAGAAAGACCAAATAATTAAGCAAGGTGATTATATAATTGTTAAGTTTCCaggtaaaaagaaatattataaatatctttgtattgttcaAGATATAAATAAGCCAGATATTGAAGTTATGGCAATGAAAGCCTGTGATTCATCGAAAGctgtatttaaagaaaatgttaaggatattagtattattagtaTTTCCGAAGTAGTAGCAGTCCTAGAACCACCAAAAATGATTATAACAGGTGATAGAattaagtataaatttgataaagcTTTAGAAGTAGATggttaa
Protein Sequence
MPPIKGQMFRYSEADMEAAVQECRRGLPTATVAKKFGVPRVTLLNKVRGKTPLKRKMGRKCYISEDTENMLVLWAKEMVKQGFPIGKENLQDSVKKIVDDLNIETPFTEGRPGKRWYNSFLKRHPDLILRQPQNLTTSRASVTTSQLKNWFDEVYTHLNDTNNREILDDPRRIFNMDETAFFLNPKGSKVLAPKGIKSVYQQINSDEKECFTVLLGGNASGDVLPPMVIFKYERIPRELSLSVPASWGIGRSNNGWMTMETFYEYICNIFDKWLNDNNIPRPVILFMDGHTSHLSFHVSKFCSDNKIILIALFPNATHLLQPMDVAVFRSLKGAWKNAVHSWRLENIDSPVLRKVHFCPLLNKVLKETLTPEIFQNGFRKCGLLPWNPDEVICVSEDPKLTELQLLAKTKELEIGMKFMDKYIDADKVAKFKEVRGNDWIGANAEFGLFQFYKKVENLLVQTKNQLATQVILSTEILPTLNSSVPEYNCTSEITNFQTEVPQAPEPTESISLSPSTSQVIRLNSPSVIYSYLPTNEEPKTPSKVADPAQASCKNLSLNLELNSTTESDILITPYESQDITELDTPDPQIVIKEVPKTPNKVPGLEISQNIPSTSRQYNITGTFRNKSEMVIPSPFKRALFWPTPKENIKKRNKEKIPSVITSIEWQTYYESKERKKIQAEEEKKRKAEERKKKKEETEKTLKLKAANKLVKKTSKTVKRKYKKVECDSSTEEEWEESGESDDDISDYNKSDDEENKYFESELEKDQIIKQGDYIIVKFPGKKKYYKYLCIVQDINKPDIEVMAMKACDSSKAVFKENVKDISIISISEVVAVLEPPKMIITGDRIKYKFDKALEVDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00290627; iTF_00290628;
90% Identity
iTF_00290627; iTF_00290628;
80% Identity
iTF_00290627;